RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.76□□□□□ -1.01
VARS-225ENST00000482996 OXTP01178 125 aa8.76□□□□□ -1.01
VARS-225ENST00000482996 NPSP0C0P6 89 aa8.76□□□□□ -1.01
VARS-225ENST00000482996 KRTDAPP60985 99 aa8.76□□□□□ -1.01
VARS-225ENST00000482996 SCGB3A1Q96QR1 104 aa8.76□□□□□ -1.01
VARS-225ENST00000482996 PTTG1IPP53801 180 aa8.75□□□□□ -1.01
VARS-225ENST00000482996 GAGE2BQ13066 116 aa8.75□□□□□ -1.01
VARS-225ENST00000482996 PAPPA-AS1Q5QFB9 102 aa8.75□□□□□ -1.01
VARS-225ENST00000482996 TOMM6Q96B49 74 aa8.75□□□□□ -1.01
VARS-225ENST00000482996 IFI27L1Q96BM0 104 aa8.75□□□□□ -1.01
VARS-225ENST00000482996 VCX2Q9H322 139 aa8.75□□□□□ -1.01
VARS-225ENST00000482996 LRP1Q07954 4544 aaKnown RBP8.75□□□□□ -1.01
VARS-225ENST00000482996 FAT3Q8TDW7 4589 aa8.75□□□□□ -1.01
VARS-225ENST00000482996 A0A087WZ39 114 aa8.74□□□□□ -1.01
VARS-225ENST00000482996 H0Y8G0 127 aa8.74□□□□□ -1.01
VARS-225ENST00000482996 RNF151Q2KHN1 245 aa8.74□□□□□ -1.01
VARS-225ENST00000482996 LINC00242Q5T6M2 205 aa8.74□□□□□ -1.01
VARS-225ENST00000482996 NDUFA1O15239 70 aa8.73□□□□□ -1.01
VARS-225ENST00000482996 UBE2D1P51668 147 aa8.73□□□□□ -1.01
VARS-225ENST00000482996 HNRNPA3P51991 378 aaKnown RBP8.73□□□□□ -1.01
VARS-225ENST00000482996 ERASQ7Z444 233 aa8.73□□□□□ -1.01
VARS-225ENST00000482996 MRPL35Q9NZE8 188 aaKnown RBP8.73□□□□□ -1.01
VARS-225ENST00000482996 A0A096LNJ9 63 aa8.72□□□□□ -1.01
VARS-225ENST00000482996 LOC105371267A0A1B0GV96 52 aa8.72□□□□□ -1.01
VARS-225ENST00000482996 IGIPA6NJ69 53 aa8.72□□□□□ -1.01
VARS-225ENST00000482996 RPL18AQ02543 176 aaKnown RBP8.72□□□□□ -1.01
VARS-225ENST00000482996 AMELXQ99217 191 aa8.72□□□□□ -1.01
VARS-225ENST00000482996 TIMM17AQ99595 171 aa8.72□□□□□ -1.01
VARS-225ENST00000482996 A0A0J9YXV3 536 aa8.71□□□□□ -1.02
VARS-225ENST00000482996 SCGB1D1O95968 90 aa8.71□□□□□ -1.02
VARS-225ENST00000482996 ZC2HC1BQ5TFG8 222 aa8.71□□□□□ -1.02
VARS-225ENST00000482996 LINC00173Q6ZV60 143 aa8.71□□□□□ -1.02
VARS-225ENST00000482996 LINC01561Q8N1V8 128 aa8.71□□□□□ -1.02
VARS-225ENST00000482996 C3orf79P0CE67 100 aa8.7□□□□□ -1.02
VARS-225ENST00000482996 SEC11AP67812 179 aa8.7□□□□□ -1.02
VARS-225ENST00000482996 PET117Q6UWS5 81 aa8.7□□□□□ -1.02
VARS-225ENST00000482996 SYS1-DBNDD2H3BUS1 97 aa8.69□□□□□ -1.02
VARS-225ENST00000482996 PRR3P79522 188 aaKnown RBP8.69□□□□□ -1.02
VARS-225ENST00000482996 UNQ6190/PRO20217Q6UXQ8 127 aa8.69□□□□□ -1.02
VARS-225ENST00000482996 HERVK_113P63121 156 aa8.68□□□□□ -1.02
VARS-225ENST00000482996 KIAA0087Q14695 138 aa8.68□□□□□ -1.02
VARS-225ENST00000482996 C10orf25Q5T742 122 aa8.68□□□□□ -1.02
VARS-225ENST00000482996 FAM19A3Q7Z5A8 133 aa8.68□□□□□ -1.02
VARS-225ENST00000482996 GEMIN7Q9H840 131 aaKnown RBP8.68□□□□□ -1.02
VARS-225ENST00000482996 PRSS2P07478 247 aa8.67□□□□□ -1.02
VARS-225ENST00000482996 SMIM6P0DI80 62 aa8.67□□□□□ -1.02
VARS-225ENST00000482996 JOSD1Q15040 202 aaPredicted RBP8.67□□□□□ -1.02
VARS-225ENST00000482996 PMVKQ15126 192 aa8.67□□□□□ -1.02
VARS-225ENST00000482996 C9orf116Q5BN46 136 aaPredicted RBP8.67□□□□□ -1.02
VARS-225ENST00000482996 C6orf48Q9UBA6 75 aa8.67□□□□□ -1.02
VARS-225ENST00000482996 TRBV30A0A0K0K1B3 111 aa8.66□□□□□ -1.02
VARS-225ENST00000482996 A0A1W2PNN7 141 aa8.66□□□□□ -1.02
VARS-225ENST00000482996 TLX1NBP0CAT3 122 aa8.66□□□□□ -1.02
VARS-225ENST00000482996 Q6ZRP5 223 aa8.66□□□□□ -1.02
VARS-225ENST00000482996 TRAV12-1A0A0B4J245 112 aa8.65□□□□□ -1.02
VARS-225ENST00000482996 HSBP1L1C9JCN9 74 aa8.65□□□□□ -1.02
VARS-225ENST00000482996 S100A12P80511 92 aa8.65□□□□□ -1.02
VARS-225ENST00000482996 TOMM7Q9P0U1 55 aa8.65□□□□□ -1.02
VARS-225ENST00000482996 CHTOPQ9Y3Y2 248 aaKnown RBP8.65□□□□□ -1.02
VARS-225ENST00000482996 UBR4Q5T4S7 5183 aa8.64□□□□□ -1.03
VARS-225ENST00000482996 CKS1BP61024 79 aa8.64□□□□□ -1.03
VARS-225ENST00000482996 C6orf226Q5I0X4 101 aa8.64□□□□□ -1.03
VARS-225ENST00000482996 C2orf82Q6UX34 121 aa8.64□□□□□ -1.03
VARS-225ENST00000482996 F8VRH5 84 aa8.63□□□□□ -1.03
VARS-225ENST00000482996 DPM2O94777 84 aa8.63□□□□□ -1.03
VARS-225ENST00000482996 PLNP26678 52 aa8.63□□□□□ -1.03
VARS-225ENST00000482996 GAGE2EQ4V326 116 aa8.63□□□□□ -1.03
VARS-225ENST00000482996 PYY3Q5JQD4 70 aa8.63□□□□□ -1.03
VARS-225ENST00000482996 LINC01545Q5VT33 79 aa8.63□□□□□ -1.03
VARS-225ENST00000482996 Q8IZM0 81 aa8.63□□□□□ -1.03
VARS-225ENST00000482996 LINC00469Q8N7U9 141 aa8.63□□□□□ -1.03
VARS-225ENST00000482996 GAGE2DQ9UEU5 116 aa8.63□□□□□ -1.03
VARS-225ENST00000482996 CDKN2A-AS1Q9UH64 79 aa8.63□□□□□ -1.03
VARS-225ENST00000482996 NDUFC2-KCTD14E9PQ53 114 aa8.62□□□□□ -1.03
VARS-225ENST00000482996 ODF1Q14990 250 aa8.62□□□□□ -1.03
VARS-225ENST00000482996 PMCHL2Q9BQD1 86 aa8.62□□□□□ -1.03
VARS-225ENST00000482996 CST9LQ9H4G1 147 aa8.62□□□□□ -1.03
VARS-225ENST00000482996 TINCRA0A1B0GVN0 87 aa8.61□□□□□ -1.03
VARS-225ENST00000482996 IGKCP01834 107 aa8.61□□□□□ -1.03
VARS-225ENST00000482996 SERTAD4-AS1Q5TG53 156 aa8.61□□□□□ -1.03
VARS-225ENST00000482996 SPINK6Q6UWN8 80 aa8.61□□□□□ -1.03
VARS-225ENST00000482996 PHF5AQ7RTV0 110 aaKnown RBP8.61□□□□□ -1.03
VARS-225ENST00000482996 VAMP8Q9BV40 100 aa8.61□□□□□ -1.03
VARS-225ENST00000482996 HERVK_113P61574 105 aa8.6□□□□□ -1.03
VARS-225ENST00000482996 FAM168BA1KXE4 195 aa8.59□□□□□ -1.03
VARS-225ENST00000482996 CXCL5P42830 114 aa8.59□□□□□ -1.03
VARS-225ENST00000482996 FAM19A5Q7Z5A7 132 aaPredicted RBP8.59□□□□□ -1.03
VARS-225ENST00000482996 ATOH7Q8N100 152 aa8.59□□□□□ -1.03
VARS-225ENST00000482996 C12orf57Q99622 126 aa8.59□□□□□ -1.03
VARS-225ENST00000482996 PSORS1C2Q9UIG4 136 aa8.59□□□□□ -1.03
VARS-225ENST00000482996 IGLV5-45A0A087WSX0 123 aa8.58□□□□□ -1.04
VARS-225ENST00000482996 TMEM170BQ5T4T1 132 aa8.58□□□□□ -1.04
VARS-225ENST00000482996 REG3GQ6UW15 175 aa8.58□□□□□ -1.04
VARS-225ENST00000482996 SMIM1B2RUZ4 78 aa8.57□□□□□ -1.04
VARS-225ENST00000482996 H3BRM9 83 aa8.57□□□□□ -1.04
VARS-225ENST00000482996 MT1HL1P0DM35 61 aa8.57□□□□□ -1.04
VARS-225ENST00000482996 SRSF9Q13242 221 aaKnown RBP eCLIP8.57□□□□□ -1.04
VARS-225ENST00000482996 COX7B2Q8TF08 81 aa8.57□□□□□ -1.04
VARS-225ENST00000482996 IGLC3P0DOY3 106 aa8.56□□□□□ -1.04
VARS-225ENST00000482996 C1orf137Q5JT78 98 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms