RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 A0A1W2PNN7 141 aa9.45□□□□□ -0.9
COL16A1-213ENST00000482910 ATP5LO75964 103 aa9.45□□□□□ -0.9
COL16A1-213ENST00000482910 CXCL5P42830 114 aa9.45□□□□□ -0.9
COL16A1-213ENST00000482910 CKS1BP61024 79 aa9.45□□□□□ -0.9
COL16A1-213ENST00000482910 C9orf116Q5BN46 136 aaPredicted RBP9.45□□□□□ -0.9
COL16A1-213ENST00000482910 C6orf226Q5I0X4 101 aa9.45□□□□□ -0.9
COL16A1-213ENST00000482910 C2orf82Q6UX34 121 aa9.45□□□□□ -0.9
COL16A1-213ENST00000482910 Q6ZRP5 223 aa9.45□□□□□ -0.9
COL16A1-213ENST00000482910 CHCHD1Q96BP2 118 aaKnown RBP9.45□□□□□ -0.9
COL16A1-213ENST00000482910 TOMM7Q9P0U1 55 aa9.45□□□□□ -0.9
COL16A1-213ENST00000482910 SMIM1B2RUZ4 78 aa9.44□□□□□ -0.9
COL16A1-213ENST00000482910 OXTP01178 125 aa9.44□□□□□ -0.9
COL16A1-213ENST00000482910 HNRNPA3P51991 378 aaKnown RBP9.44□□□□□ -0.9
COL16A1-213ENST00000482910 NDUFC2-KCTD14E9PQ53 114 aa9.43□□□□□ -0.9
COL16A1-213ENST00000482910 IGLC3P0DOY3 106 aa9.43□□□□□ -0.9
COL16A1-213ENST00000482910 PRR3P79522 188 aaKnown RBP9.43□□□□□ -0.9
COL16A1-213ENST00000482910 PKHD1L1Q86WI1 4243 aa9.42□□□□□ -0.9
COL16A1-213ENST00000482910 F8VRH5 84 aa9.41□□□□□ -0.9
COL16A1-213ENST00000482910 H3BRM9 83 aa9.41□□□□□ -0.9
COL16A1-213ENST00000482910 J3QL48 77 aa9.41□□□□□ -0.9
COL16A1-213ENST00000482910 PMCHL1Q16048 86 aa9.41□□□□□ -0.9
COL16A1-213ENST00000482910 GAGE2EQ4V326 116 aa9.4□□□□□ -0.9
COL16A1-213ENST00000482910 COX7B2Q8TF08 81 aa9.4□□□□□ -0.9
COL16A1-213ENST00000482910 GAGE2DQ9UEU5 116 aa9.4□□□□□ -0.9
COL16A1-213ENST00000482910 TRGC2P03986 189 aa9.39□□□□□ -0.91
COL16A1-213ENST00000482910 NDUFA6P56556 154 aa9.39□□□□□ -0.91
COL16A1-213ENST00000482910 SPINK8P0C7L1 97 aa9.38□□□□□ -0.91
COL16A1-213ENST00000482910 ODF1Q14990 250 aa9.38□□□□□ -0.91
COL16A1-213ENST00000482910 IGLV5-39A0A0G2JS06 123 aa9.37□□□□□ -0.91
COL16A1-213ENST00000482910 COLCA2A8K830 154 aa9.37□□□□□ -0.91
COL16A1-213ENST00000482910 ZNF22P17026 224 aaPredicted RBP9.37□□□□□ -0.91
COL16A1-213ENST00000482910 BAGE3Q86Y29 109 aa9.37□□□□□ -0.91
COL16A1-213ENST00000482910 TRAV12-1A0A0B4J245 112 aa9.36□□□□□ -0.91
COL16A1-213ENST00000482910 HSBP1O75506 76 aa9.36□□□□□ -0.91
COL16A1-213ENST00000482910 C9orf129Q5T035 196 aaKnown RBP9.36□□□□□ -0.91
COL16A1-213ENST00000482910 PHF5AQ7RTV0 110 aaKnown RBP9.36□□□□□ -0.91
COL16A1-213ENST00000482910 IFI27L1Q96BM0 104 aa9.36□□□□□ -0.91
COL16A1-213ENST00000482910 LRP1Q07954 4544 aaKnown RBP9.35□□□□□ -0.91
COL16A1-213ENST00000482910 FAM168BA1KXE4 195 aa9.35□□□□□ -0.91
COL16A1-213ENST00000482910 C11orf86A6NJI1 115 aa9.34□□□□□ -0.91
COL16A1-213ENST00000482910 SPINK6Q6UWN8 80 aa9.34□□□□□ -0.91
COL16A1-213ENST00000482910 FAM19A5Q7Z5A7 132 aaPredicted RBP9.34□□□□□ -0.91
COL16A1-213ENST00000482910 KRTAP7-1Q8IUC3 87 aa9.34□□□□□ -0.91
COL16A1-213ENST00000482910 PSORS1C2Q9UIG4 136 aa9.34□□□□□ -0.91
COL16A1-213ENST00000482910 CHTOPQ9Y3Y2 248 aaKnown RBP9.34□□□□□ -0.91
COL16A1-213ENST00000482910 FAT3Q8TDW7 4589 aa9.33□□□□□ -0.92
COL16A1-213ENST00000482910 SRSF9Q13242 221 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL16A1-213ENST00000482910 M0QXV9 152 aa9.32□□□□□ -0.92
COL16A1-213ENST00000482910 TMEM170BQ5T4T1 132 aa9.32□□□□□ -0.92
COL16A1-213ENST00000482910 SFTA2Q6UW10 78 aa9.32□□□□□ -0.92
COL16A1-213ENST00000482910 FAM19A2Q8N3H0 131 aa9.32□□□□□ -0.92
COL16A1-213ENST00000482910 SERF1AO75920 110 aa9.31□□□□□ -0.92
COL16A1-213ENST00000482910 LINC00310P59036 64 aa9.31□□□□□ -0.92
COL16A1-213ENST00000482910 XAGE1AQ9HD64 81 aa9.3□□□□□ -0.92
COL16A1-213ENST00000482910 TP73-AS1Q9UF72 201 aa9.3□□□□□ -0.92
COL16A1-213ENST00000482910 LEPROTL1O95214 131 aa9.29□□□□□ -0.92
COL16A1-213ENST00000482910 C1orf137Q5JT78 98 aa9.29□□□□□ -0.92
COL16A1-213ENST00000482910 PLA2G2DQ9UNK4 145 aa9.29□□□□□ -0.92
COL16A1-213ENST00000482910 MT1HL1P0DM35 61 aa9.28□□□□□ -0.92
COL16A1-213ENST00000482910 COX17Q14061 63 aa9.28□□□□□ -0.92
COL16A1-213ENST00000482910 SERTAD4-AS1Q5TG53 156 aa9.28□□□□□ -0.92
COL16A1-213ENST00000482910 REG3GQ6UW15 175 aa9.28□□□□□ -0.92
COL16A1-213ENST00000482910 TMEM223A0PJW6 202 aa9.27□□□□□ -0.93
COL16A1-213ENST00000482910 UBE2BP63146 152 aa9.27□□□□□ -0.93
COL16A1-213ENST00000482910 LBHQ53QV2 105 aaPredicted RBP9.27□□□□□ -0.93
COL16A1-213ENST00000482910 KRTAP11-1Q8IUC1 163 aa9.27□□□□□ -0.93
COL16A1-213ENST00000482910 LINC01600Q96MT4 127 aa9.27□□□□□ -0.93
COL16A1-213ENST00000482910 HSPB8Q9UJY1 196 aa9.27□□□□□ -0.93
COL16A1-213ENST00000482910 C22orf24Q9Y442 160 aa9.27□□□□□ -0.93
COL16A1-213ENST00000482910 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
COL16A1-213ENST00000482910 ZNF625Q96I27 306 aaPredicted RBP9.26□□□□□ -0.93
COL16A1-213ENST00000482910 ERG28Q9UKR5 140 aa9.26□□□□□ -0.93
COL16A1-213ENST00000482910 IGLV5-37A0A075B6J1 123 aa9.25□□□□□ -0.93
COL16A1-213ENST00000482910 NUPR1O60356 82 aa9.25□□□□□ -0.93
COL16A1-213ENST00000482910 SCO1O75880 301 aa9.25□□□□□ -0.93
COL16A1-213ENST00000482910 MRPL55Q7Z7F7 128 aaKnown RBP9.24□□□□□ -0.93
COL16A1-213ENST00000482910 HIST1H2BKO60814 126 aa9.22□□□□□ -0.93
COL16A1-213ENST00000482910 HIST1H2BJP06899 126 aa9.22□□□□□ -0.93
COL16A1-213ENST00000482910 HIST1H2BOP23527 126 aa9.22□□□□□ -0.93
COL16A1-213ENST00000482910 PLNP26678 52 aa9.22□□□□□ -0.93
COL16A1-213ENST00000482910 HIST1H2BBP33778 126 aa9.22□□□□□ -0.93
COL16A1-213ENST00000482910 PFN2P35080 140 aa9.22□□□□□ -0.93
COL16A1-213ENST00000482910 HIST1H2BDP58876 126 aa9.22□□□□□ -0.93
COL16A1-213ENST00000482910 HIST1H2BCP62807 126 aa9.22□□□□□ -0.93
COL16A1-213ENST00000482910 HIST2H2BEQ16778 126 aa9.22□□□□□ -0.93
COL16A1-213ENST00000482910 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.22□□□□□ -0.93
COL16A1-213ENST00000482910 HIST1H2BHQ93079 126 aa9.22□□□□□ -0.93
COL16A1-213ENST00000482910 DIRC1Q969H9 104 aa9.22□□□□□ -0.93
COL16A1-213ENST00000482910 HIST1H2BNQ99877 126 aa9.22□□□□□ -0.93
COL16A1-213ENST00000482910 HIST1H2BMQ99879 126 aa9.22□□□□□ -0.93
COL16A1-213ENST00000482910 FABP4P15090 132 aa9.21□□□□□ -0.94
COL16A1-213ENST00000482910 SND1-IT1Q9HBX3 110 aa9.21□□□□□ -0.94
COL16A1-213ENST00000482910 H0Y8G0 127 aa9.2□□□□□ -0.94
COL16A1-213ENST00000482910 H0Y9J4 135 aa9.19□□□□□ -0.94
COL16A1-213ENST00000482910 HERV-K104P63124 156 aa9.19□□□□□ -0.94
COL16A1-213ENST00000482910 NKAPP1Q8N9T2 125 aa9.19□□□□□ -0.94
COL16A1-213ENST00000482910 LINC00167Q96N53 147 aa9.19□□□□□ -0.94
COL16A1-213ENST00000482910 MAP1LC3CQ9BXW4 147 aa9.19□□□□□ -0.94
COL16A1-213ENST00000482910 LINC00587B1AMM8 73 aa9.18□□□□□ -0.94
COL16A1-213ENST00000482910 DPM2O94777 84 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms