RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ATOH7Q8N100 152 aa8.58□□□□□ -1.04
HDAC1-208ENST00000482310 COX7B2Q8TF08 81 aa8.58□□□□□ -1.04
HDAC1-208ENST00000482310 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.57□□□□□ -1.04
HDAC1-208ENST00000482310 C20orf202A1L168 122 aa8.57□□□□□ -1.04
HDAC1-208ENST00000482310 NDUFA1O15239 70 aa8.57□□□□□ -1.04
HDAC1-208ENST00000482310 GCSHP23434 173 aa8.57□□□□□ -1.04
HDAC1-208ENST00000482310 CKS1BP61024 79 aa8.57□□□□□ -1.04
HDAC1-208ENST00000482310 CNBPP62633 177 aaKnown RBP8.57□□□□□ -1.04
HDAC1-208ENST00000482310 KIAA0087Q14695 138 aa8.57□□□□□ -1.04
HDAC1-208ENST00000482310 C10orf25Q5T742 122 aa8.57□□□□□ -1.04
HDAC1-208ENST00000482310 CDPF1Q6NVV7 123 aa8.57□□□□□ -1.04
HDAC1-208ENST00000482310 UNQ6190/PRO20217Q6UXQ8 127 aa8.57□□□□□ -1.04
HDAC1-208ENST00000482310 KRTAP10-1P60331 282 aa8.56□□□□□ -1.04
HDAC1-208ENST00000482310 Q8IZM0 81 aa8.56□□□□□ -1.04
HDAC1-208ENST00000482310 C2orf48Q96LS8 159 aa8.56□□□□□ -1.04
HDAC1-208ENST00000482310 HERVK_113P61574 105 aa8.55□□□□□ -1.04
HDAC1-208ENST00000482310 IGLV5-39A0A0G2JS06 123 aa8.54□□□□□ -1.04
HDAC1-208ENST00000482310 C9orf116Q5BN46 136 aaPredicted RBP8.54□□□□□ -1.04
HDAC1-208ENST00000482310 C9orf163Q8N9P6 203 aa8.54□□□□□ -1.04
HDAC1-208ENST00000482310 C6orf48Q9UBA6 75 aa8.54□□□□□ -1.04
HDAC1-208ENST00000482310 SCGB1D1O95968 90 aa8.53□□□□□ -1.04
HDAC1-208ENST00000482310 HAMPP81172 84 aa8.53□□□□□ -1.04
HDAC1-208ENST00000482310 RPL18AQ02543 176 aaKnown RBP8.53□□□□□ -1.04
HDAC1-208ENST00000482310 STPG4Q8N801 248 aa8.53□□□□□ -1.04
HDAC1-208ENST00000482310 ZNF625Q96I27 306 aaPredicted RBP8.53□□□□□ -1.04
HDAC1-208ENST00000482310 KRTAP4-5Q9BYR2 181 aa8.53□□□□□ -1.04
HDAC1-208ENST00000482310 IGKV2-24A0A0C4DH68 120 aa8.52□□□□□ -1.05
HDAC1-208ENST00000482310 CHTF8P0CG12 524 aa8.52□□□□□ -1.05
HDAC1-208ENST00000482310 TSPEAR-AS2P59090 65 aa8.52□□□□□ -1.05
HDAC1-208ENST00000482310 LEPROTO15243 131 aa8.51□□□□□ -1.05
HDAC1-208ENST00000482310 CXCL5P42830 114 aa8.5□□□□□ -1.05
HDAC1-208ENST00000482310 GAGE2BQ13066 116 aa8.5□□□□□ -1.05
HDAC1-208ENST00000482310 MAJINQ3KP22 176 aa8.5□□□□□ -1.05
HDAC1-208ENST00000482310 LRP1BQ9NZR2 4599 aa8.5□□□□□ -1.05
HDAC1-208ENST00000482310 FAM30AQ9NZY2 134 aa8.5□□□□□ -1.05
HDAC1-208ENST00000482310 A0A096LNI7 61 aa8.49□□□□□ -1.05
HDAC1-208ENST00000482310 TRBV30A0A0K0K1B3 111 aa8.49□□□□□ -1.05
HDAC1-208ENST00000482310 LOC107984640A0A0U1RRK4 108 aa8.49□□□□□ -1.05
HDAC1-208ENST00000482310 F8WDY8 70 aa8.49□□□□□ -1.05
HDAC1-208ENST00000482310 J3QQQ9 107 aa8.49□□□□□ -1.05
HDAC1-208ENST00000482310 LGALS3P17931 250 aaKnown RBP8.49□□□□□ -1.05
HDAC1-208ENST00000482310 PLEKHB2Q96CS7 222 aa8.49□□□□□ -1.05
HDAC1-208ENST00000482310 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.49□□□□□ -1.05
HDAC1-208ENST00000482310 PANO1I0J062 215 aa8.48□□□□□ -1.05
HDAC1-208ENST00000482310 PFN2P35080 140 aa8.48□□□□□ -1.05
HDAC1-208ENST00000482310 GAGE2EQ4V326 116 aa8.48□□□□□ -1.05
HDAC1-208ENST00000482310 ANKRD39Q53RE8 183 aa8.48□□□□□ -1.05
HDAC1-208ENST00000482310 SDIM1Q6ZPB5 146 aa8.48□□□□□ -1.05
HDAC1-208ENST00000482310 DPH3Q96FX2 82 aa8.48□□□□□ -1.05
HDAC1-208ENST00000482310 GAGE2DQ9UEU5 116 aa8.48□□□□□ -1.05
HDAC1-208ENST00000482310 NDUFA12Q9UI09 145 aa8.48□□□□□ -1.05
HDAC1-208ENST00000482310 IGKV2D-26A0A0A0MRZ7 120 aa8.47□□□□□ -1.05
HDAC1-208ENST00000482310 A0A0U1RRA0 63 aa8.47□□□□□ -1.05
HDAC1-208ENST00000482310 E9PLD3 99 aa8.47□□□□□ -1.05
HDAC1-208ENST00000482310 NMUP48645 174 aa8.47□□□□□ -1.05
HDAC1-208ENST00000482310 AKR1D1P51857 326 aa8.47□□□□□ -1.05
HDAC1-208ENST00000482310 HSPG2P98160 4391 aa8.47□□□□□ -1.05
HDAC1-208ENST00000482310 DNAH8Q96JB1 4490 aa8.47□□□□□ -1.05
HDAC1-208ENST00000482310 RNF151Q2KHN1 245 aa8.46□□□□□ -1.06
HDAC1-208ENST00000482310 Q6ZRP5 223 aa8.46□□□□□ -1.06
HDAC1-208ENST00000482310 TTTY13Q9BZ97 58 aa8.46□□□□□ -1.06
HDAC1-208ENST00000482310 HSBP1L1C9JCN9 74 aa8.45□□□□□ -1.06
HDAC1-208ENST00000482310 PTTG1IPP53801 180 aa8.45□□□□□ -1.06
HDAC1-208ENST00000482310 MEIG1Q5JSS6 88 aa8.45□□□□□ -1.06
HDAC1-208ENST00000482310 MYMXA0A1B0GTQ4 84 aa8.44□□□□□ -1.06
HDAC1-208ENST00000482310 NDUFC2-KCTD14E9PQ53 114 aa8.44□□□□□ -1.06
HDAC1-208ENST00000482310 ERG28Q9UKR5 140 aa8.44□□□□□ -1.06
HDAC1-208ENST00000482310 PKIGQ9Y2B9 76 aa8.44□□□□□ -1.06
HDAC1-208ENST00000482310 APOBP04114 4563 aaKnown RBP8.44□□□□□ -1.06
HDAC1-208ENST00000482310 ZNF815PA8K554 130 aa8.43□□□□□ -1.06
HDAC1-208ENST00000482310 LINC00158P58513 81 aa8.43□□□□□ -1.06
HDAC1-208ENST00000482310 SCXQ7RTU7 201 aa8.43□□□□□ -1.06
HDAC1-208ENST00000482310 SPACA4Q8TDM5 124 aa8.43□□□□□ -1.06
HDAC1-208ENST00000482310 XAGE1AQ9HD64 81 aa8.43□□□□□ -1.06
HDAC1-208ENST00000482310 TLX1NBP0CAT3 122 aa8.42□□□□□ -1.06
HDAC1-208ENST00000482310 SMIM13P0DJ93 91 aa8.42□□□□□ -1.06
HDAC1-208ENST00000482310 JOSD1Q15040 202 aaPredicted RBP8.42□□□□□ -1.06
HDAC1-208ENST00000482310 SFTA2Q6UW10 78 aa8.42□□□□□ -1.06
HDAC1-208ENST00000482310 Q6ZSA8 131 aa8.42□□□□□ -1.06
HDAC1-208ENST00000482310 FAM168BA1KXE4 195 aa8.41□□□□□ -1.06
HDAC1-208ENST00000482310 HERV-K104P63124 156 aa8.41□□□□□ -1.06
HDAC1-208ENST00000482310 PCP2Q8IVA1 136 aa8.41□□□□□ -1.06
HDAC1-208ENST00000482310 PAM16Q9Y3D7 125 aa8.41□□□□□ -1.06
HDAC1-208ENST00000482310 A0A087WYN8 130 aa8.4□□□□□ -1.06
HDAC1-208ENST00000482310 XGP55808 180 aa8.4□□□□□ -1.06
HDAC1-208ENST00000482310 PYY3Q5JQD4 70 aa8.4□□□□□ -1.06
HDAC1-208ENST00000482310 C9orf129Q5T035 196 aaKnown RBP8.4□□□□□ -1.06
HDAC1-208ENST00000482310 FAM19A5Q7Z5A7 132 aaPredicted RBP8.4□□□□□ -1.06
HDAC1-208ENST00000482310 DAND5Q8N907 189 aa8.4□□□□□ -1.06
HDAC1-208ENST00000482310 CIRBP-AS1Q8TBR5 109 aa8.4□□□□□ -1.06
HDAC1-208ENST00000482310 A0A0J9YXY3 114 aa8.39□□□□□ -1.07
HDAC1-208ENST00000482310 VAMP8Q9BV40 100 aa8.39□□□□□ -1.07
HDAC1-208ENST00000482310 LINC00474Q9P2X8 69 aa8.39□□□□□ -1.07
HDAC1-208ENST00000482310 TP73-AS1Q9UF72 201 aa8.39□□□□□ -1.07
HDAC1-208ENST00000482310 A0A1W2PNN7 141 aa8.38□□□□□ -1.07
HDAC1-208ENST00000482310 SMR3BP02814 79 aaPredicted RBP8.38□□□□□ -1.07
HDAC1-208ENST00000482310 NPC2P61916 151 aa8.38□□□□□ -1.07
HDAC1-208ENST00000482310 SPATA45Q537H7 98 aa8.38□□□□□ -1.07
HDAC1-208ENST00000482310 CIRBPQ14011 172 aaKnown RBP8.37□□□□□ -1.07
HDAC1-208ENST00000482310 COX17Q14061 63 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms