RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 SERP2Q8N6R1 65 aa8.12□□□□□ -1.11
SMPD4-218ENST00000482171 UPK3BQ9BT76 320 aa8.12□□□□□ -1.11
SMPD4-218ENST00000482171 RETNQ9HD89 108 aa8.12□□□□□ -1.11
SMPD4-218ENST00000482171 DEFB131BA0A096LNP1 70 aa8.12□□□□□ -1.11
SMPD4-218ENST00000482171 TIMM17BO60830 172 aa8.12□□□□□ -1.11
SMPD4-218ENST00000482171 TMEM258P61165 79 aa8.12□□□□□ -1.11
SMPD4-218ENST00000482171 A0A087WVE0 104 aa8.11□□□□□ -1.11
SMPD4-218ENST00000482171 LOC107984640A0A0U1RRK4 108 aa8.11□□□□□ -1.11
SMPD4-218ENST00000482171 MIFP14174 115 aa8.11□□□□□ -1.11
SMPD4-218ENST00000482171 DEFB105AQ8NG35 78 aa8.11□□□□□ -1.11
SMPD4-218ENST00000482171 KLK9Q2XQG4 91 aa8.1□□□□□ -1.11
SMPD4-218ENST00000482171 CHCHD10Q8WYQ3 142 aaPredicted RBP8.1□□□□□ -1.11
SMPD4-218ENST00000482171 PPDPFQ9H3Y8 114 aa8.1□□□□□ -1.11
SMPD4-218ENST00000482171 C16orf95Q9H693 158 aa8.1□□□□□ -1.11
SMPD4-218ENST00000482171 WDFY3Q8IZQ1 3526 aa8.1□□□□□ -1.11
SMPD4-218ENST00000482171 Q8N2B8 174 aa8.1□□□□□ -1.11
SMPD4-218ENST00000482171 ITPR1Q14643 2758 aa8.1□□□□□ -1.11
SMPD4-218ENST00000482171 WFDC9Q8NEX5 89 aa8.09□□□□□ -1.11
SMPD4-218ENST00000482171 Q9UF83 564 aa8.09□□□□□ -1.11
SMPD4-218ENST00000482171 KIF25-AS1Q9Y6Z4 181 aa8.09□□□□□ -1.11
SMPD4-218ENST00000482171 SMIM11BQ8TCY0 68 aa8.09□□□□□ -1.12
SMPD4-218ENST00000482171 SCXQ7RTU7 201 aa8.08□□□□□ -1.12
SMPD4-218ENST00000482171 BRK1Q8WUW1 75 aa8.08□□□□□ -1.12
SMPD4-218ENST00000482171 RMI2Q96E14 147 aa8.08□□□□□ -1.12
SMPD4-218ENST00000482171 UBR5O95071 2799 aaPredicted RBP8.08□□□□□ -1.12
SMPD4-218ENST00000482171 FAM236DA0A1B0GTK5 79 aa8.08□□□□□ -1.12
SMPD4-218ENST00000482171 FSHBP01225 129 aa8.08□□□□□ -1.12
SMPD4-218ENST00000482171 FAM236CP0DP71 79 aa8.08□□□□□ -1.12
SMPD4-218ENST00000482171 LINC00242Q5T6M2 205 aa8.07□□□□□ -1.12
SMPD4-218ENST00000482171 STAB1Q9NY15 2570 aa8.07□□□□□ -1.12
SMPD4-218ENST00000482171 A0A096LNT2 108 aa8.07□□□□□ -1.12
SMPD4-218ENST00000482171 FHL3Q13643 280 aa8.07□□□□□ -1.12
SMPD4-218ENST00000482171 FAM19A5Q7Z5A7 132 aaPredicted RBP8.06□□□□□ -1.12
SMPD4-218ENST00000482171 FAM19A4Q96LR4 140 aa8.06□□□□□ -1.12
SMPD4-218ENST00000482171 SETXQ7Z333 2677 aaKnown RBP8.06□□□□□ -1.12
SMPD4-218ENST00000482171 HRCT1Q6UXD1 115 aa8.06□□□□□ -1.12
SMPD4-218ENST00000482171 PKIGQ9Y2B9 76 aa8.06□□□□□ -1.12
SMPD4-218ENST00000482171 CXCL5P42830 114 aa8.06□□□□□ -1.12
SMPD4-218ENST00000482171 KPRPQ5T749 579 aaPredicted RBP8.06□□□□□ -1.12
SMPD4-218ENST00000482171 COX6A2Q02221 97 aa8.06□□□□□ -1.12
SMPD4-218ENST00000482171 NREPQ16612 68 aa8.06□□□□□ -1.12
SMPD4-218ENST00000482171 KIR2DL5BQ8NHK3 375 aa8.06□□□□□ -1.12
SMPD4-218ENST00000482171 CHCHD7Q9BUK0 85 aa8.06□□□□□ -1.12
SMPD4-218ENST00000482171 COL6A5A8TX70 2615 aa8.05□□□□□ -1.12
SMPD4-218ENST00000482171 F8WEM9 126 aa8.05□□□□□ -1.12
SMPD4-218ENST00000482171 LINC00315P59091 139 aa8.05□□□□□ -1.12
SMPD4-218ENST00000482171 XAGE1AQ9HD64 81 aa8.05□□□□□ -1.12
SMPD4-218ENST00000482171 IBA57-AS1B1ANH7 110 aa8.05□□□□□ -1.12
SMPD4-218ENST00000482171 C6orf99Q4VX62 202 aa8.05□□□□□ -1.12
SMPD4-218ENST00000482171 CDC42SE2Q9NRR3 84 aa8.05□□□□□ -1.12
SMPD4-218ENST00000482171 NOTCH1P46531 2555 aa8.05□□□□□ -1.12
SMPD4-218ENST00000482171 IGLV4-60A0A075B6I1 120 aa8.05□□□□□ -1.12
SMPD4-218ENST00000482171 NANOS2P60321 138 aaKnown RBP8.05□□□□□ -1.12
SMPD4-218ENST00000482171 SNURFQ9Y675 71 aa8.05□□□□□ -1.12
SMPD4-218ENST00000482171 AMELXQ99217 191 aa8.04□□□□□ -1.12
SMPD4-218ENST00000482171 MPLKIPQ8TAP9 179 aa8.04□□□□□ -1.12
SMPD4-218ENST00000482171 SMIM1B2RUZ4 78 aa8.03□□□□□ -1.12
SMPD4-218ENST00000482171 C11orf72Q8NBR9 251 aa8.03□□□□□ -1.12
SMPD4-218ENST00000482171 A0A0U1RQV1 116 aa8.03□□□□□ -1.12
SMPD4-218ENST00000482171 LINC00959A0A1B0GUT2 108 aa8.03□□□□□ -1.12
SMPD4-218ENST00000482171 FHL2Q14192 279 aa8.03□□□□□ -1.12
SMPD4-218ENST00000482171 A0A0J9YWU9 116 aa8.03□□□□□ -1.12
SMPD4-218ENST00000482171 ITPR2Q14571 2701 aa8.03□□□□□ -1.12
SMPD4-218ENST00000482171 BEAN1Q3B7T3 259 aa8.03□□□□□ -1.12
SMPD4-218ENST00000482171 SBSPONQ8IVN8 264 aa8.03□□□□□ -1.12
SMPD4-218ENST00000482171 UBE2BP63146 152 aa8.02□□□□□ -1.13
SMPD4-218ENST00000482171 A0A087WYN8 130 aa8.01□□□□□ -1.13
SMPD4-218ENST00000482171 DIRC1Q969H9 104 aa8.01□□□□□ -1.13
SMPD4-218ENST00000482171 TRBV7-7A0A0K0K1E9 115 aa8.01□□□□□ -1.13
SMPD4-218ENST00000482171 NDUFC2O95298 119 aa8.01□□□□□ -1.13
SMPD4-218ENST00000482171 Q6JHZ5 121 aa8.01□□□□□ -1.13
SMPD4-218ENST00000482171 ASPMQ8IZT6 3477 aa8.01□□□□□ -1.13
SMPD4-218ENST00000482171 ZANQ9Y493 2812 aa8.01□□□□□ -1.13
SMPD4-218ENST00000482171 IGKV2-24A0A0C4DH68 120 aa8□□□□□ -1.13
SMPD4-218ENST00000482171 ATP5EP2Q5VTU8 51 aa8□□□□□ -1.13
SMPD4-218ENST00000482171 DMDP11532 3685 aa8□□□□□ -1.13
SMPD4-218ENST00000482171 Q6ZTC4 211 aa8□□□□□ -1.13
SMPD4-218ENST00000482171 DCHS1Q96JQ0 3298 aa8□□□□□ -1.13
SMPD4-218ENST00000482171 FUSP35637 526 aaKnown RBP eCLIP7.99□□□□□ -1.13
SMPD4-218ENST00000482171 CSDC2Q9Y534 153 aaKnown RBP7.99□□□□□ -1.13
SMPD4-218ENST00000482171 LINC00846Q9NV44 126 aa7.99□□□□□ -1.13
SMPD4-218ENST00000482171 RPL28P46779 137 aaKnown RBP7.99□□□□□ -1.13
SMPD4-218ENST00000482171 NBEAL2Q6ZNJ1 2754 aa7.98□□□□□ -1.13
SMPD4-218ENST00000482171 LELP1Q5T871 98 aa7.98□□□□□ -1.13
SMPD4-218ENST00000482171 CD164L2Q6UWJ8 174 aa7.98□□□□□ -1.13
SMPD4-218ENST00000482171 Q6ZQY7 126 aa7.98□□□□□ -1.13
SMPD4-218ENST00000482171 ETDCA0A1B0GVM5 59 aa7.98□□□□□ -1.13
SMPD4-218ENST00000482171 NHLRC4P0CG21 123 aaPredicted RBP7.98□□□□□ -1.13
SMPD4-218ENST00000482171 PRR3P79522 188 aaKnown RBP7.98□□□□□ -1.13
SMPD4-218ENST00000482171 PDE6GP18545 87 aa7.97□□□□□ -1.13
SMPD4-218ENST00000482171 LAMA5O15230 3695 aa7.97□□□□□ -1.13
SMPD4-218ENST00000482171 C9orf116Q5BN46 136 aaPredicted RBP7.96□□□□□ -1.13
SMPD4-218ENST00000482171 UTP20O75691 2785 aaKnown RBP7.96□□□□□ -1.13
SMPD4-218ENST00000482171 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.96□□□□□ -1.14
SMPD4-218ENST00000482171 COX7BP24311 80 aa7.96□□□□□ -1.14
SMPD4-218ENST00000482171 KRTAP1-3Q8IUG1 177 aa7.96□□□□□ -1.14
SMPD4-218ENST00000482171 CELA1Q9UNI1 258 aa7.96□□□□□ -1.14
SMPD4-218ENST00000482171 NBEAL1Q6ZS30 2694 aa7.96□□□□□ -1.14
SMPD4-218ENST00000482171 NTM-AS1Q6ZSK4 140 aa7.95□□□□□ -1.14
SMPD4-218ENST00000482171 FAM19A1Q7Z5A9 133 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms