RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 V9GYH0 126 aa1.53□□□□□ -2.16
SF3B1-210ENST00000482158 NCOA6Q14686 2063 aaPredicted RBP1.52□□□□□ -2.17
SF3B1-210ENST00000482158 LRRC7Q96NW7 1537 aa1.52□□□□□ -2.17
SF3B1-210ENST00000482158 NKTRP30414 1462 aaKnown RBP1.52□□□□□ -2.17
SF3B1-210ENST00000482158 A0A1B0GWA3 101 aa1.52□□□□□ -2.17
SF3B1-210ENST00000482158 CEBPZOSA8MTT3 80 aa1.52□□□□□ -2.17
SF3B1-210ENST00000482158 JMJD7-PLA2G4BH0Y9G9 81 aa1.52□□□□□ -2.17
SF3B1-210ENST00000482158 PPP1R17O96001 155 aa1.52□□□□□ -2.17
SF3B1-210ENST00000482158 ARMS2P0C7Q2 107 aa1.52□□□□□ -2.17
SF3B1-210ENST00000482158 C3orf79P0CE67 100 aa1.52□□□□□ -2.17
SF3B1-210ENST00000482158 SPAG11BQ08648 103 aa1.52□□□□□ -2.17
SF3B1-210ENST00000482158 C10orf55Q5SWW7 151 aa1.52□□□□□ -2.17
SF3B1-210ENST00000482158 SPAG11AQ6PDA7 123 aa1.52□□□□□ -2.17
SF3B1-210ENST00000482158 C6orf201Q7Z4U5 140 aa1.52□□□□□ -2.17
SF3B1-210ENST00000482158 Q86TA4 180 aa1.52□□□□□ -2.17
SF3B1-210ENST00000482158 HILPDAQ9Y5L2 63 aa1.52□□□□□ -2.17
SF3B1-210ENST00000482158 ALPK2Q86TB3 2170 aa1.52□□□□□ -2.17
SF3B1-210ENST00000482158 USP32Q8NFA0 1604 aa1.51□□□□□ -2.17
SF3B1-210ENST00000482158 EIF2AK4Q9P2K8 1649 aaKnown RBP1.51□□□□□ -2.17
SF3B1-210ENST00000482158 IQGAP2Q13576 1575 aa1.51□□□□□ -2.17
SF3B1-210ENST00000482158 UGGT1Q9NYU2 1555 aa1.51□□□□□ -2.17
SF3B1-210ENST00000482158 SPINT3P49223 89 aa1.51□□□□□ -2.17
SF3B1-210ENST00000482158 COX7B2Q8TF08 81 aa1.51□□□□□ -2.17
SF3B1-210ENST00000482158 AMELXQ99217 191 aa1.51□□□□□ -2.17
SF3B1-210ENST00000482158 PRR15LQ9BU68 103 aa1.51□□□□□ -2.17
SF3B1-210ENST00000482158 ARL2-SNX15V9GYD0 113 aa1.51□□□□□ -2.17
SF3B1-210ENST00000482158 PAPPA2Q9BXP8 1791 aa1.51□□□□□ -2.17
SF3B1-210ENST00000482158 NRAPQ86VF7 1730 aa1.51□□□□□ -2.17
SF3B1-210ENST00000482158 FMN2Q9NZ56 1722 aa1.51□□□□□ -2.17
SF3B1-210ENST00000482158 KIAA0556O60303 1618 aa1.51□□□□□ -2.17
SF3B1-210ENST00000482158 IGKV2-40A0A087WW87 121 aaPredicted RBP1.5□□□□□ -2.17
SF3B1-210ENST00000482158 NBDYA0A0U1RRE5 68 aa1.5□□□□□ -2.17
SF3B1-210ENST00000482158 IGKV2D-40P01614 121 aaPredicted RBP1.5□□□□□ -2.17
SF3B1-210ENST00000482158 CCL18P55774 89 aa1.5□□□□□ -2.17
SF3B1-210ENST00000482158 FAM74A4Q5TZK3 123 aa1.5□□□□□ -2.17
SF3B1-210ENST00000482158 SMIM5Q71RC9 77 aa1.5□□□□□ -2.17
SF3B1-210ENST00000482158 DEFB132Q7Z7B7 95 aa1.5□□□□□ -2.17
SF3B1-210ENST00000482158 LRP6O75581 1613 aa1.5□□□□□ -2.17
SF3B1-210ENST00000482158 POLR1AO95602 1720 aaPredicted RBP1.49□□□□□ -2.17
SF3B1-210ENST00000482158 KIF21BO75037 1637 aa1.49□□□□□ -2.17
SF3B1-210ENST00000482158 LEPROTL1O95214 131 aa1.49□□□□□ -2.17
SF3B1-210ENST00000482158 RPL37AP61513 92 aaKnown RBP1.49□□□□□ -2.17
SF3B1-210ENST00000482158 ATP5EP2Q5VTU8 51 aa1.49□□□□□ -2.17
SF3B1-210ENST00000482158 WFDC10AQ9H1F0 79 aa1.49□□□□□ -2.17
SF3B1-210ENST00000482158 UBE2D4Q9Y2X8 147 aa1.49□□□□□ -2.17
SF3B1-210ENST00000482158 MED13LQ71F56 2210 aa1.49□□□□□ -2.17
SF3B1-210ENST00000482158 ATP7BP35670 1465 aa1.49□□□□□ -2.17
SF3B1-210ENST00000482158 C3P01024 1663 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 A0A087WTM6 91 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 A0A087WVE0 104 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 FXYD6-FXYD2A0A087WZ82 144 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 TRBV7-4A0A0J9YYF1 115 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 D6R8Y8 96 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 F8VRH5 84 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 M0R3E3 92 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 DNAL4O96015 105 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 IFI27P40305 119 aaPredicted RBP1.48□□□□□ -2.17
SF3B1-210ENST00000482158 FXYD3Q14802 87 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 MUSTN1Q8IVN3 82 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 FDCSPQ8NFU4 85 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 PPP1R1CQ8WVI7 109 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 KLK9Q9UKQ9 250 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 LINC01558Q9Y6Z2 57 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 R4GMQ9 66 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 CACNA1CQ13936 2221 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 LY75O60449 1722 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 TJP1Q07157 1748 aa1.48□□□□□ -2.17
SF3B1-210ENST00000482158 HCRTO43612 131 aa1.47□□□□□ -2.17
SF3B1-210ENST00000482158 IL9P15248 144 aa1.47□□□□□ -2.17
SF3B1-210ENST00000482158 C5orf56Q8N8D9 126 aa1.47□□□□□ -2.17
SF3B1-210ENST00000482158 PLAC8Q9NZF1 115 aa1.47□□□□□ -2.17
SF3B1-210ENST00000482158 SNURFQ9Y675 71 aa1.47□□□□□ -2.17
SF3B1-210ENST00000482158 H3BVH4 76 aa1.46□□□□□ -2.18
SF3B1-210ENST00000482158 M0R135 149 aa1.46□□□□□ -2.18
SF3B1-210ENST00000482158 S100A3P33764 101 aa1.46□□□□□ -2.18
SF3B1-210ENST00000482158 BAGE2Q86Y30 109 aa1.46□□□□□ -2.18
SF3B1-210ENST00000482158 WFDC6Q9BQY6 131 aa1.46□□□□□ -2.18
SF3B1-210ENST00000482158 V9GYV3 84 aa1.46□□□□□ -2.18
SF3B1-210ENST00000482158 DOT1LQ8TEK3 1739 aa1.46□□□□□ -2.18
SF3B1-210ENST00000482158 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.45□□□□□ -2.18
SF3B1-210ENST00000482158 LOC110117498A0A087WWA1 95 aa1.45□□□□□ -2.18
SF3B1-210ENST00000482158 UQCR11O14957 56 aa1.45□□□□□ -2.18
SF3B1-210ENST00000482158 INE1O15225 51 aa1.45□□□□□ -2.18
SF3B1-210ENST00000482158 ZNF137PP52743 207 aa1.45□□□□□ -2.18
SF3B1-210ENST00000482158 LINC00322Q6ZN03 302 aaPredicted RBP1.45□□□□□ -2.18
SF3B1-210ENST00000482158 SPRR4Q96PI1 79 aa1.45□□□□□ -2.18
SF3B1-210ENST00000482158 TMEM14CQ9P0S9 112 aa1.45□□□□□ -2.18
SF3B1-210ENST00000482158 GNG13Q9P2W3 67 aa1.45□□□□□ -2.18
SF3B1-210ENST00000482158 DDX60LQ5H9U9 1706 aaKnown RBP1.45□□□□□ -2.18
SF3B1-210ENST00000482158 ABCC6O95255 1503 aa1.45□□□□□ -2.18
SF3B1-210ENST00000482158 AGLP35573 1532 aa1.45□□□□□ -2.18
SF3B1-210ENST00000482158 ZMYM4Q5VZL5 1548 aa1.45□□□□□ -2.18
SF3B1-210ENST00000482158 NRXN3Q9Y4C0 1643 aa1.44□□□□□ -2.18
SF3B1-210ENST00000482158 SAMD9Q5K651 1589 aa1.44□□□□□ -2.18
SF3B1-210ENST00000482158 CTXND1A0A1B0GTU2 59 aa1.44□□□□□ -2.18
SF3B1-210ENST00000482158 MGPP08493 103 aa1.44□□□□□ -2.18
SF3B1-210ENST00000482158 BAGE3Q86Y29 109 aa1.44□□□□□ -2.18
SF3B1-210ENST00000482158 LINC00208Q96KT6 92 aa1.44□□□□□ -2.18
SF3B1-210ENST00000482158 Q96NJ1 140 aa1.44□□□□□ -2.18
SF3B1-210ENST00000482158 FAM103A1Q9BTL3 118 aaKnown RBP1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms