RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 TEX43Q6ZNM6 134 aa8.4□□□□□ -1.06
HDAC6-224ENST00000481929 PYGO1Q9Y3Y4 419 aa8.4□□□□□ -1.06
HDAC6-224ENST00000481929 NKAPP1Q8N9T2 125 aa8.39□□□□□ -1.07
HDAC6-224ENST00000481929 C2orf88Q9BSF0 95 aa8.39□□□□□ -1.07
HDAC6-224ENST00000481929 IGLV5-37A0A075B6J1 123 aa8.38□□□□□ -1.07
HDAC6-224ENST00000481929 CEBPGP53567 150 aa8.38□□□□□ -1.07
HDAC6-224ENST00000481929 OSTCQ9NRP0 149 aa8.38□□□□□ -1.07
HDAC6-224ENST00000481929 IGKV2-28A0A075B6P5 120 aa8.37□□□□□ -1.07
HDAC6-224ENST00000481929 IGKV2D-28P01615 120 aa8.37□□□□□ -1.07
HDAC6-224ENST00000481929 EIF5A2Q9GZV4 153 aaKnown RBP8.37□□□□□ -1.07
HDAC6-224ENST00000481929 RAB5AP20339 215 aa8.36□□□□□ -1.07
HDAC6-224ENST00000481929 LORP23490 312 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-224ENST00000481929 KRTAP19-2Q3LHN2 52 aa8.36□□□□□ -1.07
HDAC6-224ENST00000481929 FAM19A1Q7Z5A9 133 aa8.36□□□□□ -1.07
HDAC6-224ENST00000481929 LINC01551Q86U37 167 aa8.36□□□□□ -1.07
HDAC6-224ENST00000481929 DAND5Q8N907 189 aa8.36□□□□□ -1.07
HDAC6-224ENST00000481929 PLEKHB2Q96CS7 222 aa8.36□□□□□ -1.07
HDAC6-224ENST00000481929 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-224ENST00000481929 D6R8Y8 96 aa8.35□□□□□ -1.07
HDAC6-224ENST00000481929 CXCL5P42830 114 aa8.35□□□□□ -1.07
HDAC6-224ENST00000481929 NAT8BQ9UHF3 227 aa8.35□□□□□ -1.07
HDAC6-224ENST00000481929 NPYP01303 97 aa8.34□□□□□ -1.07
HDAC6-224ENST00000481929 KRTAP10-6P60371 365 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-224ENST00000481929 AKAP14Q86UN6 197 aa8.34□□□□□ -1.07
HDAC6-224ENST00000481929 SMIM7Q9BQ49 75 aa8.34□□□□□ -1.07
HDAC6-224ENST00000481929 NDUFA12Q9UI09 145 aa8.34□□□□□ -1.07
HDAC6-224ENST00000481929 V9GYV3 84 aa8.34□□□□□ -1.07
HDAC6-224ENST00000481929 XP32Q5T750 250 aa8.33□□□□□ -1.08
HDAC6-224ENST00000481929 ZC2HC1BQ5TFG8 222 aa8.33□□□□□ -1.08
HDAC6-224ENST00000481929 SCO1O75880 301 aa8.32□□□□□ -1.08
HDAC6-224ENST00000481929 CBLN2Q8IUK8 224 aa8.32□□□□□ -1.08
HDAC6-224ENST00000481929 Q8NBF4 154 aa8.32□□□□□ -1.08
HDAC6-224ENST00000481929 GNB1LQ9BYB4 327 aa8.32□□□□□ -1.08
HDAC6-224ENST00000481929 TMEM126AQ9H061 195 aa8.32□□□□□ -1.08
HDAC6-224ENST00000481929 A0A1B0GW15 77 aa8.31□□□□□ -1.08
HDAC6-224ENST00000481929 AMELXQ99217 191 aa8.31□□□□□ -1.08
HDAC6-224ENST00000481929 VCX2Q9H322 139 aa8.31□□□□□ -1.08
HDAC6-224ENST00000481929 TMEM238C9JI98 176 aa8.3□□□□□ -1.08
HDAC6-224ENST00000481929 SPINK1P00995 79 aa8.3□□□□□ -1.08
HDAC6-224ENST00000481929 PPBPP02775 128 aa8.3□□□□□ -1.08
HDAC6-224ENST00000481929 HERVK_113P63121 156 aa8.3□□□□□ -1.08
HDAC6-224ENST00000481929 FAM74A3Q4VXF1 159 aa8.3□□□□□ -1.08
HDAC6-224ENST00000481929 FAM19A3Q7Z5A8 133 aa8.3□□□□□ -1.08
HDAC6-224ENST00000481929 TCTE3Q8IZS6 198 aa8.3□□□□□ -1.08
HDAC6-224ENST00000481929 CDKN2A-AS1Q9UH64 79 aa8.3□□□□□ -1.08
HDAC6-224ENST00000481929 SEC11AP67812 179 aa8.29□□□□□ -1.08
HDAC6-224ENST00000481929 C2orf66Q6UXQ4 117 aa8.29□□□□□ -1.08
HDAC6-224ENST00000481929 SPRR4Q96PI1 79 aa8.29□□□□□ -1.08
HDAC6-224ENST00000481929 HIGD2AQ9BW72 106 aa8.29□□□□□ -1.08
HDAC6-224ENST00000481929 CYSLTR1Q9Y271 337 aa8.29□□□□□ -1.08
HDAC6-224ENST00000481929 F8W036 122 aa8.28□□□□□ -1.08
HDAC6-224ENST00000481929 RAB5BP61020 215 aa8.28□□□□□ -1.08
HDAC6-224ENST00000481929 FAM19A2Q8N3H0 131 aa8.28□□□□□ -1.08
HDAC6-224ENST00000481929 GEMIN7Q9H840 131 aaKnown RBP8.28□□□□□ -1.08
HDAC6-224ENST00000481929 M0R378 163 aa8.27□□□□□ -1.09
HDAC6-224ENST00000481929 S100A8P05109 93 aa8.27□□□□□ -1.09
HDAC6-224ENST00000481929 M0R2T5 61 aa8.26□□□□□ -1.09
HDAC6-224ENST00000481929 ORMDL3Q8N138 153 aa8.26□□□□□ -1.09
HDAC6-224ENST00000481929 ZNF706Q9Y5V0 76 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-224ENST00000481929 SMIM27A0A1W2PRY6 76 aa8.25□□□□□ -1.09
HDAC6-224ENST00000481929 NPSP0C0P6 89 aa8.25□□□□□ -1.09
HDAC6-224ENST00000481929 MRPL54Q6P161 138 aaKnown RBP8.25□□□□□ -1.09
HDAC6-224ENST00000481929 SLC51BQ86UW2 128 aa8.25□□□□□ -1.09
HDAC6-224ENST00000481929 COX7B2Q8TF08 81 aa8.25□□□□□ -1.09
HDAC6-224ENST00000481929 PRELID3AQ96N28 172 aa8.25□□□□□ -1.09
HDAC6-224ENST00000481929 SMIM1B2RUZ4 78 aa8.24□□□□□ -1.09
HDAC6-224ENST00000481929 TMEM136Q6ZRR5 245 aa8.24□□□□□ -1.09
HDAC6-224ENST00000481929 BLOC1S1P78537 153 aa8.23□□□□□ -1.09
HDAC6-224ENST00000481929 PDZD11Q5EBL8 140 aa8.23□□□□□ -1.09
HDAC6-224ENST00000481929 IGLV8-61A0A075B6I0 122 aa8.22□□□□□ -1.09
HDAC6-224ENST00000481929 LOC389332A0A1B0GUA5 103 aa8.22□□□□□ -1.09
HDAC6-224ENST00000481929 VPREB1P12018 145 aa8.22□□□□□ -1.09
HDAC6-224ENST00000481929 PAPPA-AS1Q5QFB9 102 aa8.22□□□□□ -1.09
HDAC6-224ENST00000481929 Q8N377 158 aa8.22□□□□□ -1.09
HDAC6-224ENST00000481929 A0A1B0GXF2 115 aa8.21□□□□□ -1.1
HDAC6-224ENST00000481929 IGIPA6NJ69 53 aa8.21□□□□□ -1.1
HDAC6-224ENST00000481929 RPS29P62273 56 aaKnown RBP8.21□□□□□ -1.1
HDAC6-224ENST00000481929 PRSS47A8MTI9 375 aa8.2□□□□□ -1.1
HDAC6-224ENST00000481929 SLC25A20O43772 301 aa8.2□□□□□ -1.1
HDAC6-224ENST00000481929 RPL24P83731 157 aaKnown RBP8.2□□□□□ -1.1
HDAC6-224ENST00000481929 PCOTHQ58A44 107 aa8.2□□□□□ -1.1
HDAC6-224ENST00000481929 MAP1LC3AQ9H492 121 aa8.2□□□□□ -1.1
HDAC6-224ENST00000481929 ATP5LO75964 103 aa8.19□□□□□ -1.1
HDAC6-224ENST00000481929 RPL23P62829 140 aaKnown RBP8.19□□□□□ -1.1
HDAC6-224ENST00000481929 ADIRFQ15847 76 aa8.19□□□□□ -1.1
HDAC6-224ENST00000481929 ORMDL2Q53FV1 153 aa8.19□□□□□ -1.1
HDAC6-224ENST00000481929 SRP19P09132 144 aaKnown RBP8.18□□□□□ -1.1
HDAC6-224ENST00000481929 PFN2P35080 140 aa8.18□□□□□ -1.1
HDAC6-224ENST00000481929 Q8N8P6 123 aa8.18□□□□□ -1.1
HDAC6-224ENST00000481929 LAMTOR2Q9Y2Q5 125 aa8.18□□□□□ -1.1
HDAC6-224ENST00000481929 SND1-IT1Q9HBX3 110 aa8.16□□□□□ -1.1
HDAC6-224ENST00000481929 TINCRA0A1B0GVN0 87 aa8.15□□□□□ -1.1
HDAC6-224ENST00000481929 SPINK8P0C7L1 97 aa8.15□□□□□ -1.1
HDAC6-224ENST00000481929 RAB14P61106 215 aa8.15□□□□□ -1.1
HDAC6-224ENST00000481929 IFITM2Q01629 132 aa8.15□□□□□ -1.1
HDAC6-224ENST00000481929 ALKAL2Q6UX46 152 aa8.15□□□□□ -1.1
HDAC6-224ENST00000481929 TIMM17AQ99595 171 aa8.15□□□□□ -1.1
HDAC6-224ENST00000481929 IGLV5-45A0A087WSX0 123 aa8.14□□□□□ -1.11
HDAC6-224ENST00000481929 K7EMI3 77 aa8.14□□□□□ -1.11
HDAC6-224ENST00000481929 MOBPQ13875 183 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms