RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 PAPPA-AS1Q5QFB9 102 aa6.72□□□□□ -1.33
SSBP1-210ENST00000481508 FAM19A2Q8N3H0 131 aa6.72□□□□□ -1.33
SSBP1-210ENST00000481508 OR10D4PQ8NGN7 298 aa6.72□□□□□ -1.33
SSBP1-210ENST00000481508 SPACA4Q8TDM5 124 aa6.72□□□□□ -1.33
SSBP1-210ENST00000481508 CHCHD1Q96BP2 118 aaKnown RBP6.72□□□□□ -1.33
SSBP1-210ENST00000481508 C2orf48Q96LS8 159 aa6.72□□□□□ -1.33
SSBP1-210ENST00000481508 CAMK2N2Q96S95 79 aa6.72□□□□□ -1.33
SSBP1-210ENST00000481508 IGLV5-45A0A087WSX0 123 aa6.71□□□□□ -1.34
SSBP1-210ENST00000481508 IGKV2-24A0A0C4DH68 120 aa6.71□□□□□ -1.34
SSBP1-210ENST00000481508 LINC01549A6NIU2 74 aa6.71□□□□□ -1.34
SSBP1-210ENST00000481508 C2orf82Q6UX34 121 aa6.71□□□□□ -1.34
SSBP1-210ENST00000481508 UNQ6190/PRO20217Q6UXQ8 127 aa6.71□□□□□ -1.34
SSBP1-210ENST00000481508 BAGE3Q86Y29 109 aa6.71□□□□□ -1.34
SSBP1-210ENST00000481508 C6orf48Q9UBA6 75 aa6.71□□□□□ -1.34
SSBP1-210ENST00000481508 TINCRA0A1B0GVN0 87 aa6.7□□□□□ -1.34
SSBP1-210ENST00000481508 SMIM1B2RUZ4 78 aa6.7□□□□□ -1.34
SSBP1-210ENST00000481508 ATP6V1G1O75348 118 aa6.7□□□□□ -1.34
SSBP1-210ENST00000481508 NDUFA6P56556 154 aa6.7□□□□□ -1.34
SSBP1-210ENST00000481508 HERVK_113P63121 156 aa6.7□□□□□ -1.34
SSBP1-210ENST00000481508 LINC01561Q8N1V8 128 aa6.7□□□□□ -1.34
SSBP1-210ENST00000481508 LINC00469Q8N7U9 141 aa6.7□□□□□ -1.34
SSBP1-210ENST00000481508 GEMIN7Q9H840 131 aaKnown RBP6.7□□□□□ -1.34
SSBP1-210ENST00000481508 LRP1Q07954 4544 aaKnown RBP6.69□□□□□ -1.34
SSBP1-210ENST00000481508 A0A087WYN8 130 aa6.69□□□□□ -1.34
SSBP1-210ENST00000481508 IGLC3P0DOY3 106 aa6.69□□□□□ -1.34
SSBP1-210ENST00000481508 MAJINQ3KP22 176 aa6.69□□□□□ -1.34
SSBP1-210ENST00000481508 PKHD1L1Q86WI1 4243 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 C11orf86A6NJI1 115 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 HIST1H2BKO60814 126 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 HSBP1O75506 76 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 ATP5LO75964 103 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 HIST1H2BJP06899 126 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 SPINK8P0C7L1 97 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 ZNF22P17026 224 aaPredicted RBP6.68□□□□□ -1.34
SSBP1-210ENST00000481508 HIST1H2BOP23527 126 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 HIST1H2BBP33778 126 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 HIST1H2BDP58876 126 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 KRTAP10-4P60372 401 aaPredicted RBP6.68□□□□□ -1.34
SSBP1-210ENST00000481508 HIST1H2BCP62807 126 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 SEC11AP67812 179 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 HIST2H2BEQ16778 126 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.68□□□□□ -1.34
SSBP1-210ENST00000481508 HIST1H2BHQ93079 126 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 HIST1H2BNQ99877 126 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 HIST1H2BMQ99879 126 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 MRPL35Q9NZE8 188 aaKnown RBP6.68□□□□□ -1.34
SSBP1-210ENST00000481508 TOMM7Q9P0U1 55 aa6.68□□□□□ -1.34
SSBP1-210ENST00000481508 NDUFA1O15239 70 aa6.67□□□□□ -1.34
SSBP1-210ENST00000481508 PTTG1IPP53801 180 aa6.67□□□□□ -1.34
SSBP1-210ENST00000481508 GAGE2BQ13066 116 aa6.67□□□□□ -1.34
SSBP1-210ENST00000481508 C9orf116Q5BN46 136 aaPredicted RBP6.67□□□□□ -1.34
SSBP1-210ENST00000481508 IFI27L1Q96BM0 104 aa6.67□□□□□ -1.34
SSBP1-210ENST00000481508 PLAC8Q9NZF1 115 aa6.67□□□□□ -1.34
SSBP1-210ENST00000481508 LOC107984640A0A0U1RRK4 108 aa6.66□□□□□ -1.34
SSBP1-210ENST00000481508 RPL18AQ02543 176 aaKnown RBP6.66□□□□□ -1.34
SSBP1-210ENST00000481508 RNF151Q2KHN1 245 aa6.66□□□□□ -1.34
SSBP1-210ENST00000481508 Q6ZRP5 223 aa6.66□□□□□ -1.34
SSBP1-210ENST00000481508 Q8IZM0 81 aa6.66□□□□□ -1.34
SSBP1-210ENST00000481508 STPG4Q8N801 248 aa6.66□□□□□ -1.34
SSBP1-210ENST00000481508 PACRGQ96M98 296 aaPredicted RBP6.66□□□□□ -1.34
SSBP1-210ENST00000481508 F8WDY8 70 aa6.65□□□□□ -1.34
SSBP1-210ENST00000481508 COX7B2Q8TF08 81 aa6.65□□□□□ -1.34
SSBP1-210ENST00000481508 CHTOPQ9Y3Y2 248 aaKnown RBP6.65□□□□□ -1.34
SSBP1-210ENST00000481508 TRAV12-1A0A0B4J245 112 aa6.64□□□□□ -1.35
SSBP1-210ENST00000481508 A0A1W2PNN7 141 aa6.64□□□□□ -1.35
SSBP1-210ENST00000481508 H0Y8G0 127 aa6.64□□□□□ -1.35
SSBP1-210ENST00000481508 PRSS2P07478 247 aa6.64□□□□□ -1.35
SSBP1-210ENST00000481508 S100A1P23297 94 aa6.64□□□□□ -1.35
SSBP1-210ENST00000481508 DPH3Q96FX2 82 aa6.64□□□□□ -1.35
SSBP1-210ENST00000481508 IGLV5-39A0A0G2JS06 123 aa6.63□□□□□ -1.35
SSBP1-210ENST00000481508 TRBV30A0A0K0K1B3 111 aa6.63□□□□□ -1.35
SSBP1-210ENST00000481508 FAM168BA1KXE4 195 aa6.63□□□□□ -1.35
SSBP1-210ENST00000481508 LEPROTL1O95214 131 aa6.63□□□□□ -1.35
SSBP1-210ENST00000481508 TLX1NBP0CAT3 122 aa6.63□□□□□ -1.35
SSBP1-210ENST00000481508 FABP4P15090 132 aa6.63□□□□□ -1.35
SSBP1-210ENST00000481508 ODF1Q14990 250 aa6.63□□□□□ -1.35
SSBP1-210ENST00000481508 C6orf226Q5I0X4 101 aa6.63□□□□□ -1.35
SSBP1-210ENST00000481508 KRTAP7-1Q8IUC3 87 aa6.63□□□□□ -1.35
SSBP1-210ENST00000481508 KRTAP4-2Q9BYR5 136 aa6.63□□□□□ -1.35
SSBP1-210ENST00000481508 PLA2G2DQ9UNK4 145 aa6.63□□□□□ -1.35
SSBP1-210ENST00000481508 LRP2P98164 4655 aa6.62□□□□□ -1.35
SSBP1-210ENST00000481508 F8VRH5 84 aa6.62□□□□□ -1.35
SSBP1-210ENST00000481508 HNRNPA3P51991 378 aaKnown RBP6.62□□□□□ -1.35
SSBP1-210ENST00000481508 CKS1BP61024 79 aa6.62□□□□□ -1.35
SSBP1-210ENST00000481508 GAGE2EQ4V326 116 aa6.62□□□□□ -1.35
SSBP1-210ENST00000481508 TMEM170BQ5T4T1 132 aa6.62□□□□□ -1.35
SSBP1-210ENST00000481508 PMCHL2Q9BQD1 86 aa6.62□□□□□ -1.35
SSBP1-210ENST00000481508 GAGE2DQ9UEU5 116 aa6.62□□□□□ -1.35
SSBP1-210ENST00000481508 FAT3Q8TDW7 4589 aa6.62□□□□□ -1.35
SSBP1-210ENST00000481508 TMEM223A0PJW6 202 aa6.61□□□□□ -1.35
SSBP1-210ENST00000481508 H3BRM9 83 aa6.61□□□□□ -1.35
SSBP1-210ENST00000481508 RPL37AP61513 92 aaKnown RBP6.61□□□□□ -1.35
SSBP1-210ENST00000481508 C9orf129Q5T035 196 aaKnown RBP6.61□□□□□ -1.35
SSBP1-210ENST00000481508 PKIGQ9Y2B9 76 aa6.61□□□□□ -1.35
SSBP1-210ENST00000481508 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
SSBP1-210ENST00000481508 NDUFC2-KCTD14E9PQ53 114 aa6.6□□□□□ -1.35
SSBP1-210ENST00000481508 PLA2G1BP04054 148 aaKnown RBP6.6□□□□□ -1.35
SSBP1-210ENST00000481508 LINC00474Q9P2X8 69 aa6.6□□□□□ -1.35
SSBP1-210ENST00000481508 CXCL5P42830 114 aa6.59□□□□□ -1.35
SSBP1-210ENST00000481508 COA6Q5JTJ3 125 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms