RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 LINC01551Q86U37 167 aa6.08□□□□□ -1.44
USP11-208ENST00000480104 LINC01561Q8N1V8 128 aa6.08□□□□□ -1.44
USP11-208ENST00000480104 ALKBH7Q9BT30 221 aaPredicted RBP6.08□□□□□ -1.44
USP11-208ENST00000480104 SMKR1H3BMG3 65 aa6.07□□□□□ -1.44
USP11-208ENST00000480104 LINC00483Q53H64 154 aa6.07□□□□□ -1.44
USP11-208ENST00000480104 A0A1B0GV50 99 aa6.06□□□□□ -1.44
USP11-208ENST00000480104 SUMO2P61956 95 aaKnown RBP6.06□□□□□ -1.44
USP11-208ENST00000480104 IFITM3Q01628 133 aa6.06□□□□□ -1.44
USP11-208ENST00000480104 NUDT10Q8NFP7 164 aa6.06□□□□□ -1.44
USP11-208ENST00000480104 NUDT11Q96G61 164 aa6.06□□□□□ -1.44
USP11-208ENST00000480104 Q6ZN92 141 aa6.05□□□□□ -1.44
USP11-208ENST00000480104 TRBV20OR9-2A0A075B6H5 130 aa6.04□□□□□ -1.44
USP11-208ENST00000480104 GNG4P50150 75 aa6.04□□□□□ -1.44
USP11-208ENST00000480104 NRACQ8N912 160 aa6.04□□□□□ -1.44
USP11-208ENST00000480104 C11orf52Q96A22 123 aa6.04□□□□□ -1.44
USP11-208ENST00000480104 TIMM17AQ99595 171 aa6.04□□□□□ -1.44
USP11-208ENST00000480104 GAGE2AQ6NT46 116 aa6.03□□□□□ -1.44
USP11-208ENST00000480104 SMIM12Q96EX1 92 aa6.03□□□□□ -1.44
USP11-208ENST00000480104 BORCS7-ASMTA0A0B4J1R7 106 aa6.02□□□□□ -1.45
USP11-208ENST00000480104 SSNA1O43805 119 aa6.02□□□□□ -1.45
USP11-208ENST00000480104 VPREB1P12018 145 aa6.02□□□□□ -1.45
USP11-208ENST00000480104 RAB4AP20338 218 aa6.02□□□□□ -1.45
USP11-208ENST00000480104 FAM231DQ6ZW35 169 aa6.02□□□□□ -1.45
USP11-208ENST00000480104 AMN1Q8IY45 258 aa6.02□□□□□ -1.45
USP11-208ENST00000480104 C20orf202A1L168 122 aa6.01□□□□□ -1.45
USP11-208ENST00000480104 NPSP0C0P6 89 aa6.01□□□□□ -1.45
USP11-208ENST00000480104 KCNRGQ8N5I3 272 aa6.01□□□□□ -1.45
USP11-208ENST00000480104 SMCR5Q8TEV8 140 aa6.01□□□□□ -1.45
USP11-208ENST00000480104 SFT2D1Q8WV19 159 aa6.01□□□□□ -1.45
USP11-208ENST00000480104 hCG_2014768A0A024R1R8 64 aa6□□□□□ -1.45
USP11-208ENST00000480104 RAB5BP61020 215 aa6□□□□□ -1.45
USP11-208ENST00000480104 CCL20P78556 96 aa6□□□□□ -1.45
USP11-208ENST00000480104 AKAP14Q86UN6 197 aa6□□□□□ -1.45
USP11-208ENST00000480104 TMEM191AQ9H0A3 160 aa6□□□□□ -1.45
USP11-208ENST00000480104 BIN3Q9NQY0 253 aa6□□□□□ -1.45
USP11-208ENST00000480104 IGLV4-3A0A075B6K6 122 aa5.99□□□□□ -1.45
USP11-208ENST00000480104 CXCL5P42830 114 aa5.99□□□□□ -1.45
USP11-208ENST00000480104 ENKURQ8TC29 256 aa5.99□□□□□ -1.45
USP11-208ENST00000480104 PPP1R2P9O14990 202 aa5.98□□□□□ -1.45
USP11-208ENST00000480104 PPP1R17O96001 155 aa5.98□□□□□ -1.45
USP11-208ENST00000480104 KRTAP5-9P26371 169 aa5.98□□□□□ -1.45
USP11-208ENST00000480104 CHTOPQ9Y3Y2 248 aaKnown RBP5.98□□□□□ -1.45
USP11-208ENST00000480104 C9orf153Q5TBE3 101 aa5.97□□□□□ -1.45
USP11-208ENST00000480104 ZC2HC1BQ5TFG8 222 aa5.97□□□□□ -1.45
USP11-208ENST00000480104 FAM19A3Q7Z5A8 133 aa5.97□□□□□ -1.45
USP11-208ENST00000480104 Q8NDZ9 215 aa5.97□□□□□ -1.45
USP11-208ENST00000480104 LIMD2Q9BT23 127 aa5.97□□□□□ -1.45
USP11-208ENST00000480104 MED9Q9NWA0 146 aa5.97□□□□□ -1.45
USP11-208ENST00000480104 IFI27P40305 119 aaPredicted RBP5.96□□□□□ -1.46
USP11-208ENST00000480104 FAM213BQ8TBF2 198 aa5.96□□□□□ -1.46
USP11-208ENST00000480104 MBD3L1Q8WWY6 194 aa5.96□□□□□ -1.46
USP11-208ENST00000480104 TMEM141Q96I45 108 aa5.96□□□□□ -1.46
USP11-208ENST00000480104 TCAPO15273 167 aa5.95□□□□□ -1.46
USP11-208ENST00000480104 TEX43Q6ZNM6 134 aa5.95□□□□□ -1.46
USP11-208ENST00000480104 K7EN84 100 aa5.94□□□□□ -1.46
USP11-208ENST00000480104 GIPP09681 153 aaPredicted RBP5.94□□□□□ -1.46
USP11-208ENST00000480104 BORCS7Q96B45 105 aa5.94□□□□□ -1.46
USP11-208ENST00000480104 C2orf88Q9BSF0 95 aa5.94□□□□□ -1.46
USP11-208ENST00000480104 EIF5A2Q9GZV4 153 aaKnown RBP5.94□□□□□ -1.46
USP11-208ENST00000480104 RAB14P61106 215 aa5.93□□□□□ -1.46
USP11-208ENST00000480104 KIAA1644Q3SXP7 199 aa5.93□□□□□ -1.46
USP11-208ENST00000480104 HRCT1Q6UXD1 115 aa5.93□□□□□ -1.46
USP11-208ENST00000480104 GNG13Q9P2W3 67 aa5.93□□□□□ -1.46
USP11-208ENST00000480104 CDKN2A-AS1Q9UH64 79 aa5.93□□□□□ -1.46
USP11-208ENST00000480104 PYGO1Q9Y3Y4 419 aa5.93□□□□□ -1.46
USP11-208ENST00000480104 A0A1B0GUT8 65 aa5.92□□□□□ -1.46
USP11-208ENST00000480104 RPL24P83731 157 aaKnown RBP5.92□□□□□ -1.46
USP11-208ENST00000480104 Q5BKY6 102 aa5.92□□□□□ -1.46
USP11-208ENST00000480104 C20orf166-AS1Q96NR2 134 aa5.92□□□□□ -1.46
USP11-208ENST00000480104 C20orf78Q9BR46 151 aa5.92□□□□□ -1.46
USP11-208ENST00000480104 SMIM2Q9BVW6 85 aa5.92□□□□□ -1.46
USP11-208ENST00000480104 ERC2-IT1O76042 136 aa5.91□□□□□ -1.46
USP11-208ENST00000480104 SND1-IT1Q9HBX3 110 aa5.91□□□□□ -1.46
USP11-208ENST00000480104 MANBALQ9NQG1 85 aa5.91□□□□□ -1.46
USP11-208ENST00000480104 A8MWL6 223 aa5.9□□□□□ -1.46
USP11-208ENST00000480104 COX7B2Q8TF08 81 aa5.9□□□□□ -1.46
USP11-208ENST00000480104 KRTAP2-2Q9BYT5 123 aa5.9□□□□□ -1.46
USP11-208ENST00000480104 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.46
USP11-208ENST00000480104 SMIM1B2RUZ4 78 aa5.89□□□□□ -1.47
USP11-208ENST00000480104 GATCO43716 136 aaKnown RBP5.89□□□□□ -1.47
USP11-208ENST00000480104 PFN2P35080 140 aa5.89□□□□□ -1.47
USP11-208ENST00000480104 TCTE3Q8IZS6 198 aa5.89□□□□□ -1.47
USP11-208ENST00000480104 TRBV24-1A0A075B6N3 115 aa5.88□□□□□ -1.47
USP11-208ENST00000480104 FXYD6-FXYD2A0A087WZ82 144 aa5.88□□□□□ -1.47
USP11-208ENST00000480104 MRPL51Q4U2R6 128 aaKnown RBP5.88□□□□□ -1.47
USP11-208ENST00000480104 OCC1Q8TAD7 63 aa5.88□□□□□ -1.47
USP11-208ENST00000480104 AMELXQ99217 191 aa5.88□□□□□ -1.47
USP11-208ENST00000480104 ETDCA0A1B0GVM5 59 aa5.87□□□□□ -1.47
USP11-208ENST00000480104 HIGD1CA8MV81 97 aa5.87□□□□□ -1.47
USP11-208ENST00000480104 PRYO14603 147 aa5.87□□□□□ -1.47
USP11-208ENST00000480104 H2AFB1P0C5Y9 115 aa5.87□□□□□ -1.47
USP11-208ENST00000480104 SPRR1AP35321 89 aa5.87□□□□□ -1.47
USP11-208ENST00000480104 HERVK_113P63121 156 aa5.87□□□□□ -1.47
USP11-208ENST00000480104 C2orf66Q6UXQ4 117 aa5.87□□□□□ -1.47
USP11-208ENST00000480104 PRSS47A8MTI9 375 aa5.86□□□□□ -1.47
USP11-208ENST00000480104 PDE6DO43924 150 aa5.86□□□□□ -1.47
USP11-208ENST00000480104 ATP11AUNQ6ZP68 121 aa5.86□□□□□ -1.47
USP11-208ENST00000480104 VCX2Q9H322 139 aa5.85□□□□□ -1.47
USP11-208ENST00000480104 TRBV20-1A0A075B6N2 111 aa5.84□□□□□ -1.47
USP11-208ENST00000480104 UMAD1C9J7I0 102 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms