RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 C2orf88Q9BSF0 95 aa6.94□□□□□ -1.3
CCDC18-208ENST00000479653 VCX2Q9H322 139 aa6.94□□□□□ -1.3
CCDC18-208ENST00000479653 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.93□□□□□ -1.3
CCDC18-208ENST00000479653 TRAV12-1A0A0B4J245 112 aa6.93□□□□□ -1.3
CCDC18-208ENST00000479653 SYS1-DBNDD2H3BUS1 97 aa6.93□□□□□ -1.3
CCDC18-208ENST00000479653 CNBPP62633 177 aaKnown RBP6.93□□□□□ -1.3
CCDC18-208ENST00000479653 SRSF9Q13242 221 aaKnown RBP eCLIP6.93□□□□□ -1.3
CCDC18-208ENST00000479653 PMVKQ15126 192 aa6.93□□□□□ -1.3
CCDC18-208ENST00000479653 MAJINQ3KP22 176 aa6.93□□□□□ -1.3
CCDC18-208ENST00000479653 TEX43Q6ZNM6 134 aa6.93□□□□□ -1.3
CCDC18-208ENST00000479653 IGLV4-3A0A075B6K6 122 aa6.92□□□□□ -1.3
CCDC18-208ENST00000479653 C3orf79P0CE67 100 aa6.92□□□□□ -1.3
CCDC18-208ENST00000479653 MIAQ16674 131 aa6.92□□□□□ -1.3
CCDC18-208ENST00000479653 ZNF664Q8N3J9 261 aa6.92□□□□□ -1.3
CCDC18-208ENST00000479653 STPG4Q8N801 248 aa6.92□□□□□ -1.3
CCDC18-208ENST00000479653 IGKV2-24A0A0C4DH68 120 aa6.91□□□□□ -1.3
CCDC18-208ENST00000479653 LOC105371267A0A1B0GV96 52 aa6.91□□□□□ -1.3
CCDC18-208ENST00000479653 RBX1P62877 108 aa6.91□□□□□ -1.3
CCDC18-208ENST00000479653 SEC11AP67812 179 aa6.91□□□□□ -1.3
CCDC18-208ENST00000479653 MPV17L2Q567V2 206 aa6.91□□□□□ -1.3
CCDC18-208ENST00000479653 CLPSL2Q6UWE3 100 aa6.91□□□□□ -1.3
CCDC18-208ENST00000479653 LINC00173Q6ZV60 143 aa6.91□□□□□ -1.3
CCDC18-208ENST00000479653 CDC42SE2Q9NRR3 84 aa6.91□□□□□ -1.3
CCDC18-208ENST00000479653 H0Y8G0 127 aa6.9□□□□□ -1.3
CCDC18-208ENST00000479653 CCL25O15444 150 aa6.9□□□□□ -1.3
CCDC18-208ENST00000479653 SCGB1D1O95968 90 aa6.9□□□□□ -1.3
CCDC18-208ENST00000479653 SLPIP03973 132 aa6.9□□□□□ -1.3
CCDC18-208ENST00000479653 COX6A2Q02221 97 aa6.9□□□□□ -1.3
CCDC18-208ENST00000479653 JOSD1Q15040 202 aaPredicted RBP6.9□□□□□ -1.3
CCDC18-208ENST00000479653 Q6ZUT4 128 aa6.9□□□□□ -1.3
CCDC18-208ENST00000479653 AMELXQ99217 191 aa6.9□□□□□ -1.3
CCDC18-208ENST00000479653 CST9LQ9H4G1 147 aa6.9□□□□□ -1.3
CCDC18-208ENST00000479653 F8VRH5 84 aa6.89□□□□□ -1.31
CCDC18-208ENST00000479653 PLNP26678 52 aa6.89□□□□□ -1.31
CCDC18-208ENST00000479653 LINC01545Q5VT33 79 aa6.89□□□□□ -1.31
CCDC18-208ENST00000479653 CHTOPQ9Y3Y2 248 aaKnown RBP6.89□□□□□ -1.31
CCDC18-208ENST00000479653 DPM2O94777 84 aa6.88□□□□□ -1.31
CCDC18-208ENST00000479653 KRTAP26-1Q6PEX3 210 aa6.88□□□□□ -1.31
CCDC18-208ENST00000479653 Q6ZRP5 223 aa6.88□□□□□ -1.31
CCDC18-208ENST00000479653 LINC00269Q8N2A0 174 aa6.88□□□□□ -1.31
CCDC18-208ENST00000479653 IGLV4-60A0A075B6I1 120 aa6.87□□□□□ -1.31
CCDC18-208ENST00000479653 IGLV10-54A0A075B6I4 117 aa6.87□□□□□ -1.31
CCDC18-208ENST00000479653 SMIM6P0DI80 62 aa6.87□□□□□ -1.31
CCDC18-208ENST00000479653 SS18Q15532 418 aa6.87□□□□□ -1.31
CCDC18-208ENST00000479653 OPRPNQ99935 248 aaPredicted RBP6.87□□□□□ -1.31
CCDC18-208ENST00000479653 GEMIN7Q9H840 131 aaKnown RBP6.87□□□□□ -1.31
CCDC18-208ENST00000479653 PSORS1C2Q9UIG4 136 aa6.87□□□□□ -1.31
CCDC18-208ENST00000479653 TRAV8-4A0A0B4J246 113 aa6.86□□□□□ -1.31
CCDC18-208ENST00000479653 TINCRA0A1B0GVN0 87 aa6.86□□□□□ -1.31
CCDC18-208ENST00000479653 HSBP1L1C9JCN9 74 aa6.86□□□□□ -1.31
CCDC18-208ENST00000479653 IGKCP01834 107 aa6.86□□□□□ -1.31
CCDC18-208ENST00000479653 UBE2D1P51668 147 aa6.86□□□□□ -1.31
CCDC18-208ENST00000479653 PRR26Q8N8Z3 221 aa6.86□□□□□ -1.31
CCDC18-208ENST00000479653 FAM104AQ969W3 186 aa6.86□□□□□ -1.31
CCDC18-208ENST00000479653 MRPL35Q9NZE8 188 aaKnown RBP6.86□□□□□ -1.31
CCDC18-208ENST00000479653 TRAV13-1A0A0B4J241 112 aa6.85□□□□□ -1.31
CCDC18-208ENST00000479653 IGLC3P0DOY3 106 aa6.85□□□□□ -1.31
CCDC18-208ENST00000479653 HERVK_113P63121 156 aa6.85□□□□□ -1.31
CCDC18-208ENST00000479653 S100A12P80511 92 aa6.85□□□□□ -1.31
CCDC18-208ENST00000479653 REG3AQ06141 175 aa6.85□□□□□ -1.31
CCDC18-208ENST00000479653 RNASE13Q5GAN3 156 aaKnown RBP6.85□□□□□ -1.31
CCDC18-208ENST00000479653 PYY3Q5JQD4 70 aa6.85□□□□□ -1.31
CCDC18-208ENST00000479653 FAM19A3Q7Z5A8 133 aa6.85□□□□□ -1.31
CCDC18-208ENST00000479653 PRR34Q9NV39 138 aa6.85□□□□□ -1.31
CCDC18-208ENST00000479653 LINC00959A0A1B0GUT2 108 aa6.84□□□□□ -1.31
CCDC18-208ENST00000479653 H3BRM9 83 aa6.84□□□□□ -1.31
CCDC18-208ENST00000479653 HERVK_113P61574 105 aa6.84□□□□□ -1.31
CCDC18-208ENST00000479653 IGLV4-69A0A075B6H9 119 aa6.83□□□□□ -1.32
CCDC18-208ENST00000479653 IGKV3OR2-268A0A0C4DH90 116 aa6.83□□□□□ -1.32
CCDC18-208ENST00000479653 ZC2HC1BQ5TFG8 222 aa6.83□□□□□ -1.32
CCDC18-208ENST00000479653 PMCHL2Q9BQD1 86 aa6.83□□□□□ -1.32
CCDC18-208ENST00000479653 C11orf86A6NJI1 115 aa6.82□□□□□ -1.32
CCDC18-208ENST00000479653 TMEM170BQ5T4T1 132 aa6.82□□□□□ -1.32
CCDC18-208ENST00000479653 LINC00242Q5T6M2 205 aa6.82□□□□□ -1.32
CCDC18-208ENST00000479653 LINC00469Q8N7U9 141 aa6.82□□□□□ -1.32
CCDC18-208ENST00000479653 VAMP8Q9BV40 100 aa6.82□□□□□ -1.32
CCDC18-208ENST00000479653 IGLV5-45A0A087WSX0 123 aa6.81□□□□□ -1.32
CCDC18-208ENST00000479653 A0A096LNI7 61 aa6.81□□□□□ -1.32
CCDC18-208ENST00000479653 CD164L2Q6UWJ8 174 aa6.81□□□□□ -1.32
CCDC18-208ENST00000479653 LINC01561Q8N1V8 128 aa6.81□□□□□ -1.32
CCDC18-208ENST00000479653 ATOH7Q8N100 152 aa6.8□□□□□ -1.32
CCDC18-208ENST00000479653 CHCHD10Q8WYQ3 142 aaPredicted RBP6.8□□□□□ -1.32
CCDC18-208ENST00000479653 IGHV3OR16-9A0A0B4J2B5 98 aa6.79□□□□□ -1.32
CCDC18-208ENST00000479653 COX7A2LO14548 114 aa6.79□□□□□ -1.32
CCDC18-208ENST00000479653 GHRHP01286 108 aa6.79□□□□□ -1.32
CCDC18-208ENST00000479653 ZNF22P17026 224 aaPredicted RBP6.79□□□□□ -1.32
CCDC18-208ENST00000479653 XCL1P47992 114 aa6.79□□□□□ -1.32
CCDC18-208ENST00000479653 HIGD2BQ4VC39 106 aa6.79□□□□□ -1.32
CCDC18-208ENST00000479653 C12orf57Q99622 126 aa6.79□□□□□ -1.32
CCDC18-208ENST00000479653 LINC00474Q9P2X8 69 aa6.79□□□□□ -1.32
CCDC18-208ENST00000479653 A0A087WZ39 114 aa6.78□□□□□ -1.32
CCDC18-208ENST00000479653 APOMO95445 188 aa6.78□□□□□ -1.32
CCDC18-208ENST00000479653 MALP21145 153 aa6.78□□□□□ -1.32
CCDC18-208ENST00000479653 CFAP161Q6P656 301 aa6.78□□□□□ -1.32
CCDC18-208ENST00000479653 LINC00518Q8N0U6 118 aa6.78□□□□□ -1.32
CCDC18-208ENST00000479653 CDKN2A-AS1Q9UH64 79 aa6.78□□□□□ -1.32
CCDC18-208ENST00000479653 TMEM223A0PJW6 202 aa6.77□□□□□ -1.33
CCDC18-208ENST00000479653 GAGE12HA6NDE8 117 aa6.77□□□□□ -1.33
CCDC18-208ENST00000479653 E9PLD3 99 aa6.77□□□□□ -1.33
CCDC18-208ENST00000479653 SPATA45Q537H7 98 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms