RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 ZFP36P26651 326 aaKnown RBP3.95□□□□□ -1.78
USF3-202ENST00000478658 PIP4P1Q86T03 277 aa3.95□□□□□ -1.78
USF3-202ENST00000478658 MAPK1IP1LQ8NDC0 245 aa3.95□□□□□ -1.78
USF3-202ENST00000478658 KIF25-AS1Q9Y6Z4 181 aa3.95□□□□□ -1.78
USF3-202ENST00000478658 C19orf84I3L1E1 186 aa3.94□□□□□ -1.78
USF3-202ENST00000478658 AVPP01185 164 aa3.94□□□□□ -1.78
USF3-202ENST00000478658 PLA2G5P39877 138 aa3.94□□□□□ -1.78
USF3-202ENST00000478658 RSPO1Q2MKA7 263 aaPredicted RBP3.94□□□□□ -1.78
USF3-202ENST00000478658 M0QY20 66 aa3.94□□□□□ -1.78
USF3-202ENST00000478658 PCOTHQ58A44 107 aa3.94□□□□□ -1.78
USF3-202ENST00000478658 Q6ZTI0 123 aa3.94□□□□□ -1.78
USF3-202ENST00000478658 FAM167A-AS1Q96KT0 104 aa3.94□□□□□ -1.78
USF3-202ENST00000478658 LINC00694P0DN24 101 aa3.94□□□□□ -1.78
USF3-202ENST00000478658 UNQ9165/PRO28630Q6UXU0 137 aa3.94□□□□□ -1.78
USF3-202ENST00000478658 ACACBO00763 2458 aa3.93□□□□□ -1.78
USF3-202ENST00000478658 A8MUN3 132 aa3.93□□□□□ -1.78
USF3-202ENST00000478658 CD164Q04900 197 aa3.93□□□□□ -1.78
USF3-202ENST00000478658 ACANP16112 2415 aa3.93□□□□□ -1.78
USF3-202ENST00000478658 LINC01600Q96MT4 127 aa3.93□□□□□ -1.78
USF3-202ENST00000478658 H3BNG1 76 aa3.93□□□□□ -1.78
USF3-202ENST00000478658 C11orf72Q8NBR9 251 aa3.93□□□□□ -1.78
USF3-202ENST00000478658 FAM19A4Q96LR4 140 aa3.93□□□□□ -1.78
USF3-202ENST00000478658 IGLV2-18A0A075B6J9 118 aa3.93□□□□□ -1.78
USF3-202ENST00000478658 THSD7BQ9C0I4 1608 aa3.93□□□□□ -1.78
USF3-202ENST00000478658 IGFL2Q6UWQ7 119 aa3.93□□□□□ -1.78
USF3-202ENST00000478658 ANKHD1Q8IWZ3 2542 aaKnown RBP3.92□□□□□ -1.78
USF3-202ENST00000478658 C2CD3Q4AC94 2353 aa3.92□□□□□ -1.78
USF3-202ENST00000478658 APLNQ9ULZ1 77 aa3.92□□□□□ -1.78
USF3-202ENST00000478658 FAM215AQ9Y5M1 114 aa3.92□□□□□ -1.78
USF3-202ENST00000478658 M0R2N4 97 aa3.92□□□□□ -1.78
USF3-202ENST00000478658 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
USF3-202ENST00000478658 PSORS1C2Q9UIG4 136 aa3.92□□□□□ -1.78
USF3-202ENST00000478658 DEFB4AO15263 64 aa3.92□□□□□ -1.78
USF3-202ENST00000478658 ZNF580Q9UK33 172 aa3.92□□□□□ -1.78
USF3-202ENST00000478658 A0A087WSZ3 146 aa3.92□□□□□ -1.78
USF3-202ENST00000478658 C2orf91Q6ZV80 131 aa3.92□□□□□ -1.78
USF3-202ENST00000478658 NRGNQ92686 78 aa3.92□□□□□ -1.78
USF3-202ENST00000478658 PRR15Q8IV56 129 aa3.91□□□□□ -1.78
USF3-202ENST00000478658 C11orf1Q9H5F2 150 aa3.91□□□□□ -1.78
USF3-202ENST00000478658 IGLV7-43P04211 117 aa3.91□□□□□ -1.78
USF3-202ENST00000478658 MYO18BQ8IUG5 2567 aa3.91□□□□□ -1.78
USF3-202ENST00000478658 COL27A1Q8IZC6 1860 aaPredicted RBP3.91□□□□□ -1.78
USF3-202ENST00000478658 ARTNQ5T4W7 220 aa3.91□□□□□ -1.78
USF3-202ENST00000478658 PLA2G2CQ5R387 149 aa3.91□□□□□ -1.78
USF3-202ENST00000478658 SPACA4Q8TDM5 124 aa3.91□□□□□ -1.78
USF3-202ENST00000478658 IGLV2-14P01704 120 aa3.9□□□□□ -1.78
USF3-202ENST00000478658 DMAC1Q96GE9 116 aa3.9□□□□□ -1.78
USF3-202ENST00000478658 LINC00588Q9Y4M8 146 aa3.9□□□□□ -1.78
USF3-202ENST00000478658 MRPS12O15235 138 aaKnown RBP3.9□□□□□ -1.79
USF3-202ENST00000478658 CRIP2P52943 208 aaPredicted RBP3.9□□□□□ -1.79
USF3-202ENST00000478658 SHISA4Q96DD7 197 aa3.9□□□□□ -1.79
USF3-202ENST00000478658 A0A087WV48 116 aa3.9□□□□□ -1.79
USF3-202ENST00000478658 TNP2Q05952 138 aa3.9□□□□□ -1.79
USF3-202ENST00000478658 LINC00574Q9H8X3 128 aa3.9□□□□□ -1.79
USF3-202ENST00000478658 PLA2G2EQ9NZK7 142 aa3.9□□□□□ -1.79
USF3-202ENST00000478658 H7BZZ5 65 aa3.89□□□□□ -1.79
USF3-202ENST00000478658 TFF1P04155 84 aa3.89□□□□□ -1.79
USF3-202ENST00000478658 CDC42SE2Q9NRR3 84 aa3.89□□□□□ -1.79
USF3-202ENST00000478658 CR1P17927 2039 aa3.89□□□□□ -1.79
USF3-202ENST00000478658 LCA10Q71F78 164 aa3.89□□□□□ -1.79
USF3-202ENST00000478658 IGLV4-60A0A075B6I1 120 aa3.89□□□□□ -1.79
USF3-202ENST00000478658 IGLV7-46A0A075B6I9 117 aa3.89□□□□□ -1.79
USF3-202ENST00000478658 Q6ZQT0 140 aa3.89□□□□□ -1.79
USF3-202ENST00000478658 FLVCR1-AS1Q8TAF5 88 aa3.89□□□□□ -1.79
USF3-202ENST00000478658 C16orf90A8MZG2 172 aa3.89□□□□□ -1.79
USF3-202ENST00000478658 SMIM1B2RUZ4 78 aa3.89□□□□□ -1.79
USF3-202ENST00000478658 LINC00846Q9NV44 126 aa3.89□□□□□ -1.79
USF3-202ENST00000478658 CHTF8P0CG12 524 aa3.88□□□□□ -1.79
USF3-202ENST00000478658 BBC3Q96PG8 261 aaPredicted RBP3.88□□□□□ -1.79
USF3-202ENST00000478658 IGHV3OR16-9A0A0B4J2B5 98 aa3.88□□□□□ -1.79
USF3-202ENST00000478658 Q1T7F1 81 aa3.88□□□□□ -1.79
USF3-202ENST00000478658 AMELXQ99217 191 aa3.88□□□□□ -1.79
USF3-202ENST00000478658 LOC110117498A0A087WWA1 95 aa3.88□□□□□ -1.79
USF3-202ENST00000478658 Q96NJ1 140 aa3.88□□□□□ -1.79
USF3-202ENST00000478658 TRBV7-4A0A0J9YYF1 115 aa3.87□□□□□ -1.79
USF3-202ENST00000478658 LINC00336Q6ZUF6 198 aa3.87□□□□□ -1.79
USF3-202ENST00000478658 C16orf95Q9H693 158 aa3.87□□□□□ -1.79
USF3-202ENST00000478658 C9orf129Q5T035 196 aaKnown RBP3.87□□□□□ -1.79
USF3-202ENST00000478658 CDIP1Q9H305 208 aa3.87□□□□□ -1.79
USF3-202ENST00000478658 KRTAP27-1Q3LI81 207 aa3.87□□□□□ -1.79
USF3-202ENST00000478658 A8MWP4 228 aa3.87□□□□□ -1.79
USF3-202ENST00000478658 BRI3O95415 125 aa3.87□□□□□ -1.79
USF3-202ENST00000478658 COL4A4P53420 1690 aaPredicted RBP3.87□□□□□ -1.79
USF3-202ENST00000478658 IGLV1-47P01700 117 aa3.87□□□□□ -1.79
USF3-202ENST00000478658 KLLNB2CW77 178 aa3.86□□□□□ -1.79
USF3-202ENST00000478658 INAFM1C9JVW0 142 aa3.86□□□□□ -1.79
USF3-202ENST00000478658 IGLV2-11P01706 119 aa3.86□□□□□ -1.79
USF3-202ENST00000478658 CNFNQ9BYD5 112 aa3.86□□□□□ -1.79
USF3-202ENST00000478658 MUC6Q6W4X9 2439 aa3.86□□□□□ -1.79
USF3-202ENST00000478658 C9orf116Q5BN46 136 aaPredicted RBP3.86□□□□□ -1.79
USF3-202ENST00000478658 A0A087WVE0 104 aa3.86□□□□□ -1.79
USF3-202ENST00000478658 IGLV2-8P01709 118 aa3.86□□□□□ -1.79
USF3-202ENST00000478658 XGP55808 180 aa3.85□□□□□ -1.79
USF3-202ENST00000478658 ZNF581Q9P0T4 197 aa3.85□□□□□ -1.79
USF3-202ENST00000478658 FN1P02751 2386 aaKnown RBP3.85□□□□□ -1.79
USF3-202ENST00000478658 LINC00304Q8N9R0 145 aa3.85□□□□□ -1.79
USF3-202ENST00000478658 IGLV5-37A0A075B6J1 123 aa3.85□□□□□ -1.79
USF3-202ENST00000478658 VWCEQ96DN2 955 aa3.85□□□□□ -1.79
USF3-202ENST00000478658 BRWD1-AS2P59051 145 aa3.85□□□□□ -1.79
USF3-202ENST00000478658 FHL3Q13643 280 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms