RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 USP9YO00507 2555 aaPredicted RBP6.85□□□□□ -1.31
COL13A1-207ENST00000478219 SMIM26A0A096LP01 95 aa6.84□□□□□ -1.31
COL13A1-207ENST00000478219 TRBV7-6A0A0J9YX20 115 aa6.84□□□□□ -1.31
COL13A1-207ENST00000478219 IBA57-AS1B1ANH7 110 aa6.84□□□□□ -1.31
COL13A1-207ENST00000478219 SLURP1P55000 103 aa6.84□□□□□ -1.31
COL13A1-207ENST00000478219 FAM229BQ4G0N7 80 aa6.84□□□□□ -1.31
COL13A1-207ENST00000478219 TRBV10-3A0A0K0K1G6 114 aa6.84□□□□□ -1.31
COL13A1-207ENST00000478219 LINC01547P58512 204 aaPredicted RBP6.84□□□□□ -1.31
COL13A1-207ENST00000478219 BRK1Q8WUW1 75 aa6.84□□□□□ -1.31
COL13A1-207ENST00000478219 UBE2L6O14933 153 aa6.83□□□□□ -1.32
COL13A1-207ENST00000478219 IGHV4-59P01825 116 aa6.83□□□□□ -1.32
COL13A1-207ENST00000478219 HAMPP81172 84 aa6.83□□□□□ -1.32
COL13A1-207ENST00000478219 TM2D3Q9BRN9 247 aa6.83□□□□□ -1.32
COL13A1-207ENST00000478219 LINC00482Q8N8I6 264 aa6.83□□□□□ -1.32
COL13A1-207ENST00000478219 SETXQ7Z333 2677 aaKnown RBP6.83□□□□□ -1.32
COL13A1-207ENST00000478219 TMEM256-PLSCR3K7ERE1 68 aa6.82□□□□□ -1.32
COL13A1-207ENST00000478219 RBM3P98179 157 aaKnown RBP6.82□□□□□ -1.32
COL13A1-207ENST00000478219 Q6ZQT0 140 aa6.82□□□□□ -1.32
COL13A1-207ENST00000478219 MAP6D1Q9H9H5 199 aa6.82□□□□□ -1.32
COL13A1-207ENST00000478219 C1orf158Q8N1D5 194 aa6.82□□□□□ -1.32
COL13A1-207ENST00000478219 Q8NDZ9 215 aa6.82□□□□□ -1.32
COL13A1-207ENST00000478219 SCXQ7RTU7 201 aa6.81□□□□□ -1.32
COL13A1-207ENST00000478219 ZNF843Q8N446 348 aa6.81□□□□□ -1.32
COL13A1-207ENST00000478219 INSP01308 110 aa6.81□□□□□ -1.32
COL13A1-207ENST00000478219 Q6ZVQ6 151 aa6.81□□□□□ -1.32
COL13A1-207ENST00000478219 STHQ8IWL8 128 aa6.81□□□□□ -1.32
COL13A1-207ENST00000478219 APCP25054 2843 aa6.8□□□□□ -1.32
COL13A1-207ENST00000478219 PRB1P04280 392 aa6.8□□□□□ -1.32
COL13A1-207ENST00000478219 UTP20O75691 2785 aaKnown RBP6.8□□□□□ -1.32
COL13A1-207ENST00000478219 A0A087WZ39 114 aa6.8□□□□□ -1.32
COL13A1-207ENST00000478219 PLA2G2AP14555 144 aa6.8□□□□□ -1.32
COL13A1-207ENST00000478219 Q8N3U1 123 aa6.8□□□□□ -1.32
COL13A1-207ENST00000478219 IL17DQ8TAD2 202 aa6.8□□□□□ -1.32
COL13A1-207ENST00000478219 MPLKIPQ8TAP9 179 aa6.8□□□□□ -1.32
COL13A1-207ENST00000478219 TRBV10-1A0A0K0K1A3 114 aa6.79□□□□□ -1.32
COL13A1-207ENST00000478219 C6orf99Q4VX62 202 aa6.79□□□□□ -1.32
COL13A1-207ENST00000478219 C6orf226Q5I0X4 101 aa6.79□□□□□ -1.32
COL13A1-207ENST00000478219 SETD2Q9BYW2 2564 aaPredicted RBP6.79□□□□□ -1.32
COL13A1-207ENST00000478219 USP9XQ93008 2570 aaPredicted RBP6.79□□□□□ -1.32
COL13A1-207ENST00000478219 FN1P02751 2386 aaKnown RBP6.79□□□□□ -1.32
COL13A1-207ENST00000478219 TRBV7-4A0A0J9YYF1 115 aa6.78□□□□□ -1.32
COL13A1-207ENST00000478219 NOP10Q9NPE3 64 aaKnown RBP6.78□□□□□ -1.32
COL13A1-207ENST00000478219 DEFB112Q30KQ8 113 aa6.78□□□□□ -1.32
COL13A1-207ENST00000478219 NBEAL2Q6ZNJ1 2754 aa6.77□□□□□ -1.32
COL13A1-207ENST00000478219 POLQO75417 2590 aa6.77□□□□□ -1.33
COL13A1-207ENST00000478219 PTPN13Q12923 2485 aa6.77□□□□□ -1.33
COL13A1-207ENST00000478219 C9orf116Q5BN46 136 aaPredicted RBP6.77□□□□□ -1.33
COL13A1-207ENST00000478219 C1orf195Q5TG92 126 aa6.77□□□□□ -1.33
COL13A1-207ENST00000478219 CLPSL2Q6UWE3 100 aa6.77□□□□□ -1.33
COL13A1-207ENST00000478219 NF1P21359 2839 aa6.77□□□□□ -1.33
COL13A1-207ENST00000478219 CR1P17927 2039 aa6.77□□□□□ -1.33
COL13A1-207ENST00000478219 EPG5Q9HCE0 2579 aa6.76□□□□□ -1.33
COL13A1-207ENST00000478219 LAMTOR3Q9UHA4 124 aa6.76□□□□□ -1.33
COL13A1-207ENST00000478219 CFAP46Q8IYW2 2715 aa6.76□□□□□ -1.33
COL13A1-207ENST00000478219 IGHV4-30-2A0A087WSY4 118 aa6.76□□□□□ -1.33
COL13A1-207ENST00000478219 BCE1O60756 84 aa6.76□□□□□ -1.33
COL13A1-207ENST00000478219 NCOR2Q9Y618 2525 aa6.76□□□□□ -1.33
COL13A1-207ENST00000478219 CENPEQ02224 2701 aa6.76□□□□□ -1.33
COL13A1-207ENST00000478219 LINC00959A0A1B0GUT2 108 aa6.75□□□□□ -1.33
COL13A1-207ENST00000478219 MIFP14174 115 aa6.75□□□□□ -1.33
COL13A1-207ENST00000478219 ODF3L2Q3SX64 289 aa6.75□□□□□ -1.33
COL13A1-207ENST00000478219 LINC00575Q6W349 94 aa6.75□□□□□ -1.33
COL13A1-207ENST00000478219 ZFYVE26Q68DK2 2539 aa6.75□□□□□ -1.33
COL13A1-207ENST00000478219 SONP18583 2426 aaKnown RBP6.75□□□□□ -1.33
COL13A1-207ENST00000478219 LOC110117498A0A087WWA1 95 aa6.75□□□□□ -1.33
COL13A1-207ENST00000478219 Q8N9L7 120 aa6.74□□□□□ -1.33
COL13A1-207ENST00000478219 TRBV6-8A0A0A6YYG3 113 aa6.74□□□□□ -1.33
COL13A1-207ENST00000478219 C6orf223Q8N319 242 aa6.74□□□□□ -1.33
COL13A1-207ENST00000478219 V9GYY9 64 aa6.74□□□□□ -1.33
COL13A1-207ENST00000478219 MSMBP08118 114 aa6.73□□□□□ -1.33
COL13A1-207ENST00000478219 CHD8Q9HCK8 2581 aa6.73□□□□□ -1.33
COL13A1-207ENST00000478219 PLAC8L1A1L4L8 177 aa6.73□□□□□ -1.33
COL13A1-207ENST00000478219 NREPQ16612 68 aa6.73□□□□□ -1.33
COL13A1-207ENST00000478219 FLNCQ14315 2725 aa6.73□□□□□ -1.33
COL13A1-207ENST00000478219 TRGV2A0A075B6R0 118 aa6.72□□□□□ -1.33
COL13A1-207ENST00000478219 DEFB114Q30KQ6 69 aa6.72□□□□□ -1.33
COL13A1-207ENST00000478219 TMEM254Q8TBM7 123 aa6.72□□□□□ -1.33
COL13A1-207ENST00000478219 Q6ZQY7 126 aa6.72□□□□□ -1.33
COL13A1-207ENST00000478219 CXCL6P80162 114 aa6.71□□□□□ -1.33
COL13A1-207ENST00000478219 DYNLRB2Q8TF09 96 aa6.71□□□□□ -1.33
COL13A1-207ENST00000478219 ZNF702PQ9H963 129 aa6.71□□□□□ -1.33
COL13A1-207ENST00000478219 TEX15Q9BXT5 2789 aa6.71□□□□□ -1.33
COL13A1-207ENST00000478219 GCN1Q92616 2671 aaKnown RBP6.71□□□□□ -1.33
COL13A1-207ENST00000478219 BBC3Q96PG8 261 aaPredicted RBP6.71□□□□□ -1.34
COL13A1-207ENST00000478219 PIEZO1Q92508 2521 aa6.71□□□□□ -1.34
COL13A1-207ENST00000478219 Q8IZM0 81 aa6.7□□□□□ -1.34
COL13A1-207ENST00000478219 LINC00269Q8N2A0 174 aa6.7□□□□□ -1.34
COL13A1-207ENST00000478219 C11orf44Q8N8P7 122 aa6.7□□□□□ -1.34
COL13A1-207ENST00000478219 MUC7Q8TAX7 377 aa6.7□□□□□ -1.34
COL13A1-207ENST00000478219 LRRK2Q5S007 2527 aa6.7□□□□□ -1.34
COL13A1-207ENST00000478219 BPY2O14599 106 aa6.7□□□□□ -1.34
COL13A1-207ENST00000478219 NDUFC1O43677 76 aa6.7□□□□□ -1.34
COL13A1-207ENST00000478219 GIG44P09565 113 aaPredicted RBP6.7□□□□□ -1.34
COL13A1-207ENST00000478219 KIAA0087Q14695 138 aa6.7□□□□□ -1.34
COL13A1-207ENST00000478219 SPTBN4Q9H254 2564 aa6.7□□□□□ -1.34
COL13A1-207ENST00000478219 TRGV4A0A0C4DH28 118 aa6.69□□□□□ -1.34
COL13A1-207ENST00000478219 NAV2Q8IVL1 2488 aa6.69□□□□□ -1.34
COL13A1-207ENST00000478219 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.69□□□□□ -1.34
COL13A1-207ENST00000478219 MAPK1IP1LQ8NDC0 245 aa6.69□□□□□ -1.34
COL13A1-207ENST00000478219 WFDC10AQ9H1F0 79 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms