RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 C2orf82Q6UX34 121 aa6.55□□□□□ -1.36
HDAC6-222ENST00000478095 SPACA4Q8TDM5 124 aa6.55□□□□□ -1.36
HDAC6-222ENST00000478095 DPH3Q96FX2 82 aa6.55□□□□□ -1.36
HDAC6-222ENST00000478095 PACRGQ96M98 296 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-222ENST00000478095 TOMM7Q9P0U1 55 aa6.55□□□□□ -1.36
HDAC6-222ENST00000478095 EPM2AB3EWF7 344 aa6.54□□□□□ -1.36
HDAC6-222ENST00000478095 NDUFA1O15239 70 aa6.54□□□□□ -1.36
HDAC6-222ENST00000478095 ATP6V1G1O75348 118 aa6.54□□□□□ -1.36
HDAC6-222ENST00000478095 CIRBPQ14011 172 aaKnown RBP6.54□□□□□ -1.36
HDAC6-222ENST00000478095 KIAA0087Q14695 138 aa6.54□□□□□ -1.36
HDAC6-222ENST00000478095 MAJINQ3KP22 176 aa6.54□□□□□ -1.36
HDAC6-222ENST00000478095 UNQ6190/PRO20217Q6UXQ8 127 aa6.54□□□□□ -1.36
HDAC6-222ENST00000478095 LINC01561Q8N1V8 128 aa6.54□□□□□ -1.36
HDAC6-222ENST00000478095 IGLV5-45A0A087WSX0 123 aa6.53□□□□□ -1.36
HDAC6-222ENST00000478095 A0A087WYN8 130 aa6.53□□□□□ -1.36
HDAC6-222ENST00000478095 SMIM1B2RUZ4 78 aa6.53□□□□□ -1.36
HDAC6-222ENST00000478095 NUPR1O60356 82 aa6.53□□□□□ -1.36
HDAC6-222ENST00000478095 PRSS2P07478 247 aa6.53□□□□□ -1.36
HDAC6-222ENST00000478095 SPINK8P0C7L1 97 aa6.53□□□□□ -1.36
HDAC6-222ENST00000478095 RPL18AQ02543 176 aaKnown RBP6.53□□□□□ -1.36
HDAC6-222ENST00000478095 IFI27L1Q96BM0 104 aa6.53□□□□□ -1.36
HDAC6-222ENST00000478095 C6orf48Q9UBA6 75 aa6.53□□□□□ -1.36
HDAC6-222ENST00000478095 PCLOQ9Y6V0 5065 aa6.53□□□□□ -1.36
HDAC6-222ENST00000478095 LOC107984640A0A0U1RRK4 108 aa6.52□□□□□ -1.37
HDAC6-222ENST00000478095 HIST1H2BKO60814 126 aa6.52□□□□□ -1.37
HDAC6-222ENST00000478095 HIST1H2BJP06899 126 aa6.52□□□□□ -1.37
HDAC6-222ENST00000478095 IGLC3P0DOY3 106 aa6.52□□□□□ -1.37
HDAC6-222ENST00000478095 HIST1H2BOP23527 126 aa6.52□□□□□ -1.37
HDAC6-222ENST00000478095 HIST1H2BBP33778 126 aa6.52□□□□□ -1.37
HDAC6-222ENST00000478095 HIST1H2BDP58876 126 aa6.52□□□□□ -1.37
HDAC6-222ENST00000478095 HIST1H2BCP62807 126 aa6.52□□□□□ -1.37
HDAC6-222ENST00000478095 GAGE2BQ13066 116 aa6.52□□□□□ -1.37
HDAC6-222ENST00000478095 HIST2H2BEQ16778 126 aa6.52□□□□□ -1.37
HDAC6-222ENST00000478095 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-222ENST00000478095 HIST1H2BHQ93079 126 aa6.52□□□□□ -1.37
HDAC6-222ENST00000478095 HIST1H2BNQ99877 126 aa6.52□□□□□ -1.37
HDAC6-222ENST00000478095 HIST1H2BMQ99879 126 aa6.52□□□□□ -1.37
HDAC6-222ENST00000478095 MRPL35Q9NZE8 188 aaKnown RBP6.52□□□□□ -1.37
HDAC6-222ENST00000478095 C11orf86A6NJI1 115 aa6.51□□□□□ -1.37
HDAC6-222ENST00000478095 F8WDY8 70 aa6.51□□□□□ -1.37
HDAC6-222ENST00000478095 H0Y8G0 127 aa6.51□□□□□ -1.37
HDAC6-222ENST00000478095 ZNF22P17026 224 aaPredicted RBP6.51□□□□□ -1.37
HDAC6-222ENST00000478095 S100A1P23297 94 aa6.51□□□□□ -1.37
HDAC6-222ENST00000478095 PTTG1IPP53801 180 aa6.51□□□□□ -1.37
HDAC6-222ENST00000478095 CKS1BP61024 79 aa6.51□□□□□ -1.37
HDAC6-222ENST00000478095 C6orf226Q5I0X4 101 aa6.51□□□□□ -1.37
HDAC6-222ENST00000478095 Q8IZM0 81 aa6.51□□□□□ -1.37
HDAC6-222ENST00000478095 STPG4Q8N801 248 aa6.51□□□□□ -1.37
HDAC6-222ENST00000478095 PKIGQ9Y2B9 76 aa6.51□□□□□ -1.37
HDAC6-222ENST00000478095 CHTOPQ9Y3Y2 248 aaKnown RBP6.51□□□□□ -1.37
HDAC6-222ENST00000478095 KRTAP4-8A0A0G2JLE6 195 aa6.5□□□□□ -1.37
HDAC6-222ENST00000478095 H3BRM9 83 aa6.5□□□□□ -1.37
HDAC6-222ENST00000478095 LEPROTL1O95214 131 aa6.5□□□□□ -1.37
HDAC6-222ENST00000478095 FABP4P15090 132 aa6.5□□□□□ -1.37
HDAC6-222ENST00000478095 RNF151Q2KHN1 245 aa6.5□□□□□ -1.37
HDAC6-222ENST00000478095 C9orf116Q5BN46 136 aaPredicted RBP6.5□□□□□ -1.37
HDAC6-222ENST00000478095 COX7B2Q8TF08 81 aa6.5□□□□□ -1.37
HDAC6-222ENST00000478095 TMEM170BQ5T4T1 132 aa6.49□□□□□ -1.37
HDAC6-222ENST00000478095 PLAC8Q9NZF1 115 aa6.49□□□□□ -1.37
HDAC6-222ENST00000478095 LINC00474Q9P2X8 69 aa6.49□□□□□ -1.37
HDAC6-222ENST00000478095 TRAV12-1A0A0B4J245 112 aa6.48□□□□□ -1.37
HDAC6-222ENST00000478095 TRBV30A0A0K0K1B3 111 aa6.48□□□□□ -1.37
HDAC6-222ENST00000478095 GAGE2EQ4V326 116 aa6.48□□□□□ -1.37
HDAC6-222ENST00000478095 Q6ZRP5 223 aa6.48□□□□□ -1.37
HDAC6-222ENST00000478095 GAGE2DQ9UEU5 116 aa6.48□□□□□ -1.37
HDAC6-222ENST00000478095 F8VRH5 84 aa6.47□□□□□ -1.37
HDAC6-222ENST00000478095 PLA2G1BP04054 148 aaKnown RBP6.47□□□□□ -1.37
HDAC6-222ENST00000478095 HSPB8Q9UJY1 196 aa6.47□□□□□ -1.37
HDAC6-222ENST00000478095 IGLV5-39A0A0G2JS06 123 aa6.46□□□□□ -1.38
HDAC6-222ENST00000478095 A0A1W2PNN7 141 aa6.46□□□□□ -1.38
HDAC6-222ENST00000478095 NDUFC2-KCTD14E9PQ53 114 aa6.46□□□□□ -1.38
HDAC6-222ENST00000478095 TLX1NBP0CAT3 122 aa6.46□□□□□ -1.38
HDAC6-222ENST00000478095 CXCL5P42830 114 aa6.46□□□□□ -1.38
HDAC6-222ENST00000478095 RPL37AP61513 92 aaKnown RBP6.46□□□□□ -1.38
HDAC6-222ENST00000478095 ODF1Q14990 250 aa6.46□□□□□ -1.38
HDAC6-222ENST00000478095 PMCHL2Q9BQD1 86 aa6.46□□□□□ -1.38
HDAC6-222ENST00000478095 FAM168BA1KXE4 195 aa6.45□□□□□ -1.38
HDAC6-222ENST00000478095 INAFM2P0DMQ5 153 aa6.45□□□□□ -1.38
HDAC6-222ENST00000478095 KRTAP10-4P60372 401 aaPredicted RBP6.45□□□□□ -1.38
HDAC6-222ENST00000478095 TMEM223A0PJW6 202 aa6.44□□□□□ -1.38
HDAC6-222ENST00000478095 FAM19A5Q7Z5A7 132 aaPredicted RBP6.44□□□□□ -1.38
HDAC6-222ENST00000478095 C7orf33Q8WU49 177 aa6.44□□□□□ -1.38
HDAC6-222ENST00000478095 C9orf129Q5T035 196 aaKnown RBP6.43□□□□□ -1.38
HDAC6-222ENST00000478095 ZNF625Q96I27 306 aaPredicted RBP6.43□□□□□ -1.38
HDAC6-222ENST00000478095 MAP1LC3CQ9BXW4 147 aa6.43□□□□□ -1.38
HDAC6-222ENST00000478095 XAGE1AQ9HD64 81 aa6.43□□□□□ -1.38
HDAC6-222ENST00000478095 COA6Q5JTJ3 125 aaKnown RBP6.42□□□□□ -1.38
HDAC6-222ENST00000478095 PHF5AQ7RTV0 110 aaKnown RBP6.42□□□□□ -1.38
HDAC6-222ENST00000478095 DPM2O94777 84 aa6.41□□□□□ -1.38
HDAC6-222ENST00000478095 PLNP26678 52 aa6.41□□□□□ -1.38
HDAC6-222ENST00000478095 PFN2P35080 140 aa6.41□□□□□ -1.38
HDAC6-222ENST00000478095 HNRNPA3P51991 378 aaKnown RBP6.41□□□□□ -1.38
HDAC6-222ENST00000478095 KRTAP7-1Q8IUC3 87 aa6.41□□□□□ -1.38
HDAC6-222ENST00000478095 SYS1-DBNDD2H3BUS1 97 aa6.4□□□□□ -1.38
HDAC6-222ENST00000478095 IGKCP01834 107 aa6.4□□□□□ -1.38
HDAC6-222ENST00000478095 LCE1DQ5T752 114 aa6.4□□□□□ -1.38
HDAC6-222ENST00000478095 VPS13BQ7Z7G8 4022 aa6.4□□□□□ -1.39
HDAC6-222ENST00000478095 SRRM2Q9UQ35 2752 aaKnown RBP6.39□□□□□ -1.39
HDAC6-222ENST00000478095 M0QXV9 152 aa6.39□□□□□ -1.39
HDAC6-222ENST00000478095 PRR3P79522 188 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms