RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 C14orf177Q52M58 125 aa8.76□□□□□ -1.01
LMNA-214ENST00000478063 SFTA2Q6UW10 78 aa8.76□□□□□ -1.01
LMNA-214ENST00000478063 SCGB1D4Q6XE38 83 aa8.76□□□□□ -1.01
LMNA-214ENST00000478063 NTN5Q8WTR8 489 aaPredicted RBP8.76□□□□□ -1.01
LMNA-214ENST00000478063 CAMK2N2Q96S95 79 aa8.76□□□□□ -1.01
LMNA-214ENST00000478063 KMT2AQ03164 3969 aa8.76□□□□□ -1.01
LMNA-214ENST00000478063 HERV-K104P63124 156 aa8.75□□□□□ -1.01
LMNA-214ENST00000478063 C2orf48Q96LS8 159 aa8.75□□□□□ -1.01
LMNA-214ENST00000478063 A0A0J9YXY3 114 aa8.74□□□□□ -1.01
LMNA-214ENST00000478063 LRCOL1A6NCL2 159 aa8.74□□□□□ -1.01
LMNA-214ENST00000478063 MEIG1Q5JSS6 88 aa8.74□□□□□ -1.01
LMNA-214ENST00000478063 UNQ6190/PRO20217Q6UXQ8 127 aa8.74□□□□□ -1.01
LMNA-214ENST00000478063 MIEN1Q9BRT3 115 aa8.74□□□□□ -1.01
LMNA-214ENST00000478063 F8WDY8 70 aa8.73□□□□□ -1.01
LMNA-214ENST00000478063 SYCNQ0VAF6 134 aa8.73□□□□□ -1.01
LMNA-214ENST00000478063 C10orf25Q5T742 122 aa8.73□□□□□ -1.01
LMNA-214ENST00000478063 DNAH10Q8IVF4 4471 aa8.72□□□□□ -1.01
LMNA-214ENST00000478063 A0A087WTM6 91 aa8.72□□□□□ -1.01
LMNA-214ENST00000478063 HNRNPA3P51991 378 aaKnown RBP8.72□□□□□ -1.01
LMNA-214ENST00000478063 Q6ZRU5 148 aa8.72□□□□□ -1.01
LMNA-214ENST00000478063 C2orf91Q6ZV80 131 aa8.72□□□□□ -1.01
LMNA-214ENST00000478063 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.71□□□□□ -1.02
LMNA-214ENST00000478063 A0A0U1RRA0 63 aa8.71□□□□□ -1.02
LMNA-214ENST00000478063 RTL8CO15255 209 aa8.71□□□□□ -1.02
LMNA-214ENST00000478063 CARD19Q96LW7 228 aa8.71□□□□□ -1.02
LMNA-214ENST00000478063 C6orf48Q9UBA6 75 aa8.71□□□□□ -1.02
LMNA-214ENST00000478063 ERG28Q9UKR5 140 aa8.71□□□□□ -1.02
LMNA-214ENST00000478063 TRBV30A0A0K0K1B3 111 aa8.7□□□□□ -1.02
LMNA-214ENST00000478063 TMEM238C9JI98 176 aa8.7□□□□□ -1.02
LMNA-214ENST00000478063 SMIM13P0DJ93 91 aa8.7□□□□□ -1.02
LMNA-214ENST00000478063 PFN2P35080 140 aa8.7□□□□□ -1.02
LMNA-214ENST00000478063 CIRBPQ14011 172 aaKnown RBP8.7□□□□□ -1.02
LMNA-214ENST00000478063 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
LMNA-214ENST00000478063 Q8N814 137 aa8.7□□□□□ -1.02
LMNA-214ENST00000478063 HYDINQ4G0P3 5121 aa8.7□□□□□ -1.02
LMNA-214ENST00000478063 PCP4L1A6NKN8 68 aa8.69□□□□□ -1.02
LMNA-214ENST00000478063 EREGO14944 169 aa8.69□□□□□ -1.02
LMNA-214ENST00000478063 TIMM17BO60830 172 aa8.69□□□□□ -1.02
LMNA-214ENST00000478063 SLPIP03973 132 aa8.69□□□□□ -1.02
LMNA-214ENST00000478063 LINC00158P58513 81 aa8.69□□□□□ -1.02
LMNA-214ENST00000478063 TNP2Q05952 138 aa8.69□□□□□ -1.02
LMNA-214ENST00000478063 HIGD1BQ9P298 99 aa8.69□□□□□ -1.02
LMNA-214ENST00000478063 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.68□□□□□ -1.02
LMNA-214ENST00000478063 LINC00587B1AMM8 73 aa8.68□□□□□ -1.02
LMNA-214ENST00000478063 DDTP30046 118 aa8.68□□□□□ -1.02
LMNA-214ENST00000478063 CNBPP62633 177 aaKnown RBP8.67□□□□□ -1.02
LMNA-214ENST00000478063 SRSF9Q13242 221 aaKnown RBP eCLIP8.67□□□□□ -1.02
LMNA-214ENST00000478063 RNF151Q2KHN1 245 aa8.67□□□□□ -1.02
LMNA-214ENST00000478063 DAND5Q8N907 189 aa8.67□□□□□ -1.02
LMNA-214ENST00000478063 HIST1H4GQ99525 98 aa8.67□□□□□ -1.02
LMNA-214ENST00000478063 LITAFQ99732 161 aa8.67□□□□□ -1.02
LMNA-214ENST00000478063 COX17Q14061 63 aa8.66□□□□□ -1.02
LMNA-214ENST00000478063 ADAMTSL4-AS1Q5T5F5 129 aa8.66□□□□□ -1.02
LMNA-214ENST00000478063 SPANXB1Q9NS25 103 aaPredicted RBP8.66□□□□□ -1.02
LMNA-214ENST00000478063 SACSQ9NZJ4 4579 aa8.66□□□□□ -1.02
LMNA-214ENST00000478063 NPC2P61916 151 aa8.65□□□□□ -1.02
LMNA-214ENST00000478063 CTAG1AP78358 180 aa8.65□□□□□ -1.02
LMNA-214ENST00000478063 MIR7-3HGQ8N6C7 128 aa8.65□□□□□ -1.02
LMNA-214ENST00000478063 SPANXDQ9BXN6 97 aa8.65□□□□□ -1.02
LMNA-214ENST00000478063 SPANXCQ9NY87 97 aa8.65□□□□□ -1.02
LMNA-214ENST00000478063 FRAS1Q86XX4 4008 aa8.65□□□□□ -1.03
LMNA-214ENST00000478063 DNAH2Q9P225 4427 aa8.65□□□□□ -1.03
LMNA-214ENST00000478063 HSD52Q0P140 79 aa8.64□□□□□ -1.03
LMNA-214ENST00000478063 NDUFC2-KCTD14E9PQ53 114 aa8.63□□□□□ -1.03
LMNA-214ENST00000478063 RPL18AQ02543 176 aaKnown RBP8.63□□□□□ -1.03
LMNA-214ENST00000478063 LOC107984640A0A0U1RRK4 108 aa8.62□□□□□ -1.03
LMNA-214ENST00000478063 GCSHP23434 173 aa8.62□□□□□ -1.03
LMNA-214ENST00000478063 TAL2Q16559 108 aa8.62□□□□□ -1.03
LMNA-214ENST00000478063 Q6ZVH6 145 aa8.62□□□□□ -1.03
LMNA-214ENST00000478063 DNAH17Q9UFH2 4485 aa8.61□□□□□ -1.03
LMNA-214ENST00000478063 FUSP35637 526 aaKnown RBP eCLIP8.61□□□□□ -1.03
LMNA-214ENST00000478063 GAGE2EQ4V326 116 aa8.61□□□□□ -1.03
LMNA-214ENST00000478063 LINC00336Q6ZUF6 198 aa8.61□□□□□ -1.03
LMNA-214ENST00000478063 MUSTN1Q8IVN3 82 aa8.61□□□□□ -1.03
LMNA-214ENST00000478063 C9orf163Q8N9P6 203 aa8.61□□□□□ -1.03
LMNA-214ENST00000478063 LINC00308Q8TCZ7 52 aa8.61□□□□□ -1.03
LMNA-214ENST00000478063 SND1-IT1Q9HBX3 110 aa8.61□□□□□ -1.03
LMNA-214ENST00000478063 GAGE2DQ9UEU5 116 aa8.61□□□□□ -1.03
LMNA-214ENST00000478063 IGLV5-52A0A0A0MRZ9 124 aa8.6□□□□□ -1.03
LMNA-214ENST00000478063 TLX1NBP0CAT3 122 aa8.6□□□□□ -1.03
LMNA-214ENST00000478063 IFITM1P13164 125 aa8.6□□□□□ -1.03
LMNA-214ENST00000478063 Q6ZRP5 223 aa8.6□□□□□ -1.03
LMNA-214ENST00000478063 CEND1Q8N111 149 aa8.6□□□□□ -1.03
LMNA-214ENST00000478063 COPS9Q8WXC6 57 aa8.6□□□□□ -1.03
LMNA-214ENST00000478063 PKIGQ9Y2B9 76 aa8.6□□□□□ -1.03
LMNA-214ENST00000478063 M0R143 59 aa8.59□□□□□ -1.03
LMNA-214ENST00000478063 HINT1P49773 126 aaPredicted RBP8.59□□□□□ -1.03
LMNA-214ENST00000478063 GAGE2BQ13066 116 aa8.59□□□□□ -1.03
LMNA-214ENST00000478063 LINC01620Q4KN68 170 aa8.59□□□□□ -1.03
LMNA-214ENST00000478063 SOSTDC1Q6X4U4 206 aa8.59□□□□□ -1.03
LMNA-214ENST00000478063 XAGE1AQ9HD64 81 aa8.59□□□□□ -1.03
LMNA-214ENST00000478063 EIF4EBP3O60516 100 aaPredicted RBP8.58□□□□□ -1.04
LMNA-214ENST00000478063 RPL24P83731 157 aaKnown RBP8.58□□□□□ -1.04
LMNA-214ENST00000478063 PTTG1IPP53801 180 aa8.57□□□□□ -1.04
LMNA-214ENST00000478063 FXYD2P54710 66 aa8.57□□□□□ -1.04
LMNA-214ENST00000478063 BVES-AS1Q5T3Y7 98 aa8.57□□□□□ -1.04
LMNA-214ENST00000478063 RYR2Q92736 4967 aa8.56□□□□□ -1.04
LMNA-214ENST00000478063 A0A096LNI7 61 aa8.56□□□□□ -1.04
LMNA-214ENST00000478063 IGKV2-24A0A0C4DH68 120 aa8.56□□□□□ -1.04
LMNA-214ENST00000478063 KRTAP10-2P60368 255 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 275.1 ms