RNA–Protein interactions for RNA: ENST00000477872.1

TMF1-202, Transcript of TATA element modulatory factor 1, humanhuman

TSL 3

Gene TMF1, Length 222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-202ENST00000477872 COL14A1Q05707 1796 aaKnown RBP-0.64□□□□□ -2.51
TMF1-202ENST00000477872 NKTRP30414 1462 aaKnown RBP-0.64□□□□□ -2.51
TMF1-202ENST00000477872 MRC2Q9UBG0 1479 aa-0.64□□□□□ -2.51
TMF1-202ENST00000477872 CPSF4LA6NMK7 179 aaKnown RBP-0.64□□□□□ -2.51
TMF1-202ENST00000477872 BTG2P78543 158 aa-0.64□□□□□ -2.51
TMF1-202ENST00000477872 DR1Q01658 176 aa-0.64□□□□□ -2.51
TMF1-202ENST00000477872 WHAMMP3Q1A5X7 153 aa-0.64□□□□□ -2.51
TMF1-202ENST00000477872 C9orf62Q8N4C0 152 aa-0.64□□□□□ -2.51
TMF1-202ENST00000477872 PPP3R2Q96LZ3 170 aa-0.64□□□□□ -2.51
TMF1-202ENST00000477872 LINC01600Q96MT4 127 aa-0.64□□□□□ -2.51
TMF1-202ENST00000477872 NXT2Q9NPJ8 142 aaKnown RBP-0.64□□□□□ -2.51
TMF1-202ENST00000477872 FAIMQ9NVQ4 179 aa-0.64□□□□□ -2.51
TMF1-202ENST00000477872 RGPD2P0DJD1 1756 aa-0.65□□□□□ -2.51
TMF1-202ENST00000477872 ADGRL2O95490 1459 aa-0.65□□□□□ -2.51
TMF1-202ENST00000477872 SSSCA1O60232 199 aa-0.65□□□□□ -2.51
TMF1-202ENST00000477872 MT1AP04731 61 aa-0.65□□□□□ -2.51
TMF1-202ENST00000477872 ARPC4P59998 168 aa-0.65□□□□□ -2.51
TMF1-202ENST00000477872 H1FX-AS1Q4G0G2 97 aa-0.65□□□□□ -2.51
TMF1-202ENST00000477872 COMMD6Q7Z4G1 85 aa-0.65□□□□□ -2.51
TMF1-202ENST00000477872 FAM223AQ8IWN6 122 aa-0.65□□□□□ -2.51
TMF1-202ENST00000477872 LCN9Q8WX39 176 aa-0.65□□□□□ -2.51
TMF1-202ENST00000477872 LINC00474Q9P2X8 69 aa-0.65□□□□□ -2.51
TMF1-202ENST00000477872 UNC13AQ9UPW8 1703 aa-0.65□□□□□ -2.51
TMF1-202ENST00000477872 FASNP49327 2511 aaKnown RBP-0.65□□□□□ -2.51
TMF1-202ENST00000477872 CUL7Q14999 1698 aa-0.65□□□□□ -2.51
TMF1-202ENST00000477872 CCDC141Q6ZP82 1450 aa-0.66□□□□□ -2.51
TMF1-202ENST00000477872 PLEKHH2Q8IVE3 1493 aa-0.66□□□□□ -2.51
TMF1-202ENST00000477872 MBD5Q9P267 1494 aa-0.66□□□□□ -2.51
TMF1-202ENST00000477872 RYR1P21817 5038 aa-0.66□□□□□ -2.51
TMF1-202ENST00000477872 ANKRD11Q6UB99 2663 aaPredicted RBP-0.66□□□□□ -2.51
TMF1-202ENST00000477872 LRRC37AA6NMS7 1700 aa-0.66□□□□□ -2.51
TMF1-202ENST00000477872 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.66□□□□□ -2.51
TMF1-202ENST00000477872 TOP2BQ02880 1626 aa-0.66□□□□□ -2.51
TMF1-202ENST00000477872 CHKB-CPT1BH3BT56 60 aa-0.66□□□□□ -2.52
TMF1-202ENST00000477872 UBA52P62987 128 aaKnown RBP-0.66□□□□□ -2.52
TMF1-202ENST00000477872 Q56UQ5 140 aa-0.66□□□□□ -2.52
TMF1-202ENST00000477872 MEIG1Q5JSS6 88 aa-0.66□□□□□ -2.52
TMF1-202ENST00000477872 C5orf38Q86SI9 138 aa-0.66□□□□□ -2.52
TMF1-202ENST00000477872 C8orf59Q8N0T1 100 aaPredicted RBP-0.66□□□□□ -2.52
TMF1-202ENST00000477872 PFDN5Q99471 154 aa-0.66□□□□□ -2.52
TMF1-202ENST00000477872 PRO1933Q9H354 126 aa-0.66□□□□□ -2.52
TMF1-202ENST00000477872 PAIP2BQ9ULR5 123 aaKnown RBP-0.66□□□□□ -2.52
TMF1-202ENST00000477872 ARL2-SNX15V9GYD0 113 aa-0.66□□□□□ -2.52
TMF1-202ENST00000477872 SACSQ9NZJ4 4579 aa-0.66□□□□□ -2.52
TMF1-202ENST00000477872 RYR3Q15413 4870 aa-0.66□□□□□ -2.52
TMF1-202ENST00000477872 CHD1O14646 1710 aa-0.67□□□□□ -2.52
TMF1-202ENST00000477872 NLRP1Q9C000 1473 aa-0.67□□□□□ -2.52
TMF1-202ENST00000477872 RELNP78509 3460 aa-0.67□□□□□ -2.52
TMF1-202ENST00000477872 NEBP20929 6669 aa-0.67□□□□□ -2.52
TMF1-202ENST00000477872 SHPRHQ149N8 1683 aa-0.67□□□□□ -2.52
TMF1-202ENST00000477872 LOC100130705A0A1B0GUX0 176 aa-0.67□□□□□ -2.52
TMF1-202ENST00000477872 MIF4GDA9UHW6 222 aaKnown RBP-0.67□□□□□ -2.52
TMF1-202ENST00000477872 FDCSPQ8NFU4 85 aa-0.67□□□□□ -2.52
TMF1-202ENST00000477872 ARL11Q969Q4 196 aa-0.67□□□□□ -2.52
TMF1-202ENST00000477872 UQCR10Q9UDW1 63 aa-0.67□□□□□ -2.52
TMF1-202ENST00000477872 TARBP1Q13395 1621 aaKnown RBP-0.67□□□□□ -2.52
TMF1-202ENST00000477872 BCORQ6W2J9 1755 aa-0.68□□□□□ -2.52
TMF1-202ENST00000477872 NBEAQ8NFP9 2946 aa-0.68□□□□□ -2.52
TMF1-202ENST00000477872 SLIT1O75093 1534 aa-0.68□□□□□ -2.52
TMF1-202ENST00000477872 KIF20BQ96Q89 1820 aa-0.68□□□□□ -2.52
TMF1-202ENST00000477872 APOC2P02655 101 aa-0.68□□□□□ -2.52
TMF1-202ENST00000477872 SELENOWP63302 87 aa-0.68□□□□□ -2.52
TMF1-202ENST00000477872 CATR1Q13166 79 aa-0.68□□□□□ -2.52
TMF1-202ENST00000477872 EDC4Q6P2E9 1401 aaKnown RBP-0.68□□□□□ -2.52
TMF1-202ENST00000477872 LINC00470Q9BZP3 86 aa-0.68□□□□□ -2.52
TMF1-202ENST00000477872 LINC00846Q9NV44 126 aa-0.68□□□□□ -2.52
TMF1-202ENST00000477872 RNF213Q63HN8 5207 aa-0.68□□□□□ -2.52
TMF1-202ENST00000477872 A2ML1A8K2U0 1454 aa-0.68□□□□□ -2.52
TMF1-202ENST00000477872 KNDC1Q76NI1 1749 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 TROQ12816 1431 aaPredicted RBP-0.69□□□□□ -2.52
TMF1-202ENST00000477872 NAIPQ13075 1403 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 NCOA3Q9Y6Q9 1424 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 LOC105371267A0A1B0GV96 52 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 A0A1B0GWA3 101 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 FAM223BA6NKX1 122 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 OOSP1A8MZH6 123 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 FGF7P21781 194 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 UBE2D3P61077 147 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 UBE2D2P62837 147 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 SEC11AP67812 179 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.69□□□□□ -2.52
TMF1-202ENST00000477872 CRIPTQ9P021 101 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 LAMA3Q16787 3333 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 CICQ96RK0 1608 aaPredicted RBP-0.69□□□□□ -2.52
TMF1-202ENST00000477872 TRIOO75962 3097 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 PLECQ15149 4684 aaKnown RBP-0.69□□□□□ -2.52
TMF1-202ENST00000477872 DNHD1Q96M86 4753 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 MON2Q7Z3U7 1717 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 NALCNQ8IZF0 1738 aa-0.69□□□□□ -2.52
TMF1-202ENST00000477872 DOPEY1Q5JWR5 2465 aa-0.7□□□□□ -2.52
TMF1-202ENST00000477872 WDR87Q6ZQQ6 2873 aa-0.7□□□□□ -2.52
TMF1-202ENST00000477872 PDE4DIPQ5VU43 2346 aa-0.7□□□□□ -2.52
TMF1-202ENST00000477872 KIAA1109Q2LD37 5005 aa-0.7□□□□□ -2.52
TMF1-202ENST00000477872 NIPBLQ6KC79 2804 aaeCLIP-0.7□□□□□ -2.52
TMF1-202ENST00000477872 A0A1B0GU69 56 aa-0.7□□□□□ -2.52
TMF1-202ENST00000477872 UBE2L5PA0A1B0GUS4 154 aa-0.7□□□□□ -2.52
TMF1-202ENST00000477872 FAM25AB3EWG3 89 aa-0.7□□□□□ -2.52
TMF1-202ENST00000477872 FAM25CB3EWG5 89 aa-0.7□□□□□ -2.52
TMF1-202ENST00000477872 FAM25GB3EWG6 89 aa-0.7□□□□□ -2.52
TMF1-202ENST00000477872 F6UZH7 168 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms