RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 SEC11AP67812 179 aa6.18□□□□□ -1.42
SMARCB1-206ENST00000477836 LINC00269Q8N2A0 174 aa6.18□□□□□ -1.42
SMARCB1-206ENST00000477836 RMI2Q96E14 147 aa6.18□□□□□ -1.42
SMARCB1-206ENST00000477836 VAMP8Q9BV40 100 aa6.18□□□□□ -1.42
SMARCB1-206ENST00000477836 GEMIN7Q9H840 131 aaKnown RBP6.18□□□□□ -1.42
SMARCB1-206ENST00000477836 KLK12Q9UKR0 248 aa6.18□□□□□ -1.42
SMARCB1-206ENST00000477836 TINCRA0A1B0GVN0 87 aa6.17□□□□□ -1.42
SMARCB1-206ENST00000477836 C11orf86A6NJI1 115 aa6.17□□□□□ -1.42
SMARCB1-206ENST00000477836 HERVK_113P63121 156 aa6.17□□□□□ -1.42
SMARCB1-206ENST00000477836 S100A12P80511 92 aa6.17□□□□□ -1.42
SMARCB1-206ENST00000477836 REG3AQ06141 175 aa6.17□□□□□ -1.42
SMARCB1-206ENST00000477836 C12orf57Q99622 126 aa6.17□□□□□ -1.42
SMARCB1-206ENST00000477836 LINC00959A0A1B0GUT2 108 aa6.16□□□□□ -1.42
SMARCB1-206ENST00000477836 HERVK_113P61574 105 aa6.16□□□□□ -1.42
SMARCB1-206ENST00000477836 SS18Q15532 418 aa6.16□□□□□ -1.42
SMARCB1-206ENST00000477836 LINC00242Q5T6M2 205 aa6.16□□□□□ -1.42
SMARCB1-206ENST00000477836 LINC00469Q8N7U9 141 aa6.16□□□□□ -1.42
SMARCB1-206ENST00000477836 PRR34Q9NV39 138 aa6.16□□□□□ -1.42
SMARCB1-206ENST00000477836 hDV102S1A0JD36 115 aa6.15□□□□□ -1.42
SMARCB1-206ENST00000477836 H3BRM9 83 aa6.15□□□□□ -1.42
SMARCB1-206ENST00000477836 CCL25O15444 150 aa6.15□□□□□ -1.42
SMARCB1-206ENST00000477836 ZNF22P17026 224 aaPredicted RBP6.15□□□□□ -1.42
SMARCB1-206ENST00000477836 XCL1P47992 114 aa6.15□□□□□ -1.42
SMARCB1-206ENST00000477836 MIAQ16674 131 aa6.15□□□□□ -1.42
SMARCB1-206ENST00000477836 C14orf177Q52M58 125 aa6.15□□□□□ -1.42
SMARCB1-206ENST00000477836 TMEM170BQ5T4T1 132 aa6.15□□□□□ -1.42
SMARCB1-206ENST00000477836 FAM19A3Q7Z5A8 133 aa6.15□□□□□ -1.42
SMARCB1-206ENST00000477836 LINC00518Q8N0U6 118 aa6.15□□□□□ -1.42
SMARCB1-206ENST00000477836 UBE2WQ96B02 151 aa6.15□□□□□ -1.42
SMARCB1-206ENST00000477836 PAM16Q9Y3D7 125 aa6.15□□□□□ -1.42
SMARCB1-206ENST00000477836 MAJINQ3KP22 176 aa6.14□□□□□ -1.43
SMARCB1-206ENST00000477836 CRCT1Q9UGL9 99 aa6.14□□□□□ -1.43
SMARCB1-206ENST00000477836 IGLV10-54A0A075B6I4 117 aa6.13□□□□□ -1.43
SMARCB1-206ENST00000477836 IGLV5-45A0A087WSX0 123 aa6.13□□□□□ -1.43
SMARCB1-206ENST00000477836 SPATA45Q537H7 98 aa6.13□□□□□ -1.43
SMARCB1-206ENST00000477836 ENHOQ6UWT2 76 aa6.13□□□□□ -1.43
SMARCB1-206ENST00000477836 STPG4Q8N801 248 aa6.13□□□□□ -1.43
SMARCB1-206ENST00000477836 C9orf163Q8N9P6 203 aa6.13□□□□□ -1.43
SMARCB1-206ENST00000477836 CHCHD10Q8WYQ3 142 aaPredicted RBP6.13□□□□□ -1.43
SMARCB1-206ENST00000477836 DPH3Q96FX2 82 aa6.13□□□□□ -1.43
SMARCB1-206ENST00000477836 CDKN2A-AS1Q9UH64 79 aa6.13□□□□□ -1.43
SMARCB1-206ENST00000477836 TRAV8-4A0A0B4J246 113 aa6.12□□□□□ -1.43
SMARCB1-206ENST00000477836 TMEM223A0PJW6 202 aa6.12□□□□□ -1.43
SMARCB1-206ENST00000477836 ANKRD39Q53RE8 183 aa6.12□□□□□ -1.43
SMARCB1-206ENST00000477836 CD164L2Q6UWJ8 174 aa6.12□□□□□ -1.43
SMARCB1-206ENST00000477836 C1orf43Q9BWL3 253 aa6.12□□□□□ -1.43
SMARCB1-206ENST00000477836 IGHV3-64A0A075B6Q5 118 aa6.11□□□□□ -1.43
SMARCB1-206ENST00000477836 IGHV3OR16-9A0A0B4J2B5 98 aa6.11□□□□□ -1.43
SMARCB1-206ENST00000477836 GAGE12HA6NDE8 117 aa6.11□□□□□ -1.43
SMARCB1-206ENST00000477836 E9PLD3 99 aa6.11□□□□□ -1.43
SMARCB1-206ENST00000477836 COX7A2LO14548 114 aa6.11□□□□□ -1.43
SMARCB1-206ENST00000477836 SPINK8P0C7L1 97 aa6.11□□□□□ -1.43
SMARCB1-206ENST00000477836 NMUP48645 174 aa6.11□□□□□ -1.43
SMARCB1-206ENST00000477836 COX6A2Q02221 97 aa6.11□□□□□ -1.43
SMARCB1-206ENST00000477836 REG3GQ6UW15 175 aa6.11□□□□□ -1.43
SMARCB1-206ENST00000477836 SDIM1Q6ZPB5 146 aa6.11□□□□□ -1.43
SMARCB1-206ENST00000477836 A0A087WZ39 114 aa6.1□□□□□ -1.43
SMARCB1-206ENST00000477836 SMIM1B2RUZ4 78 aa6.1□□□□□ -1.43
SMARCB1-206ENST00000477836 FOXI1Q12951 378 aa6.1□□□□□ -1.43
SMARCB1-206ENST00000477836 A0A087WYN8 130 aa6.09□□□□□ -1.43
SMARCB1-206ENST00000477836 IGKV2D-26A0A0A0MRZ7 120 aa6.09□□□□□ -1.43
SMARCB1-206ENST00000477836 IGHV1-58A0A0C4DH39 117 aa6.09□□□□□ -1.43
SMARCB1-206ENST00000477836 USP17L23D6RBM5 183 aa6.09□□□□□ -1.43
SMARCB1-206ENST00000477836 TSTD3H0UI37 97 aa6.09□□□□□ -1.43
SMARCB1-206ENST00000477836 LEPROTO15243 131 aa6.09□□□□□ -1.43
SMARCB1-206ENST00000477836 LGALS3P17931 250 aaKnown RBP6.09□□□□□ -1.43
SMARCB1-206ENST00000477836 MALP21145 153 aa6.09□□□□□ -1.43
SMARCB1-206ENST00000477836 CIRBPQ14011 172 aaKnown RBP6.09□□□□□ -1.43
SMARCB1-206ENST00000477836 C5orf38Q86SI9 138 aa6.09□□□□□ -1.43
SMARCB1-206ENST00000477836 LINC01561Q8N1V8 128 aa6.09□□□□□ -1.43
SMARCB1-206ENST00000477836 C7orf33Q8WU49 177 aa6.09□□□□□ -1.43
SMARCB1-206ENST00000477836 PLEKHB2Q96CS7 222 aa6.09□□□□□ -1.43
SMARCB1-206ENST00000477836 IGLV5-39A0A0G2JS06 123 aa6.08□□□□□ -1.44
SMARCB1-206ENST00000477836 J3QQQ9 107 aa6.07□□□□□ -1.44
SMARCB1-206ENST00000477836 APOMO95445 188 aa6.07□□□□□ -1.44
SMARCB1-206ENST00000477836 PRSS2P07478 247 aa6.07□□□□□ -1.44
SMARCB1-206ENST00000477836 CHTF8P0CG12 524 aa6.07□□□□□ -1.44
SMARCB1-206ENST00000477836 COX8AP10176 69 aa6.07□□□□□ -1.44
SMARCB1-206ENST00000477836 TSPEAR-AS2P59090 65 aa6.07□□□□□ -1.44
SMARCB1-206ENST00000477836 PRR3P79522 188 aaKnown RBP6.07□□□□□ -1.44
SMARCB1-206ENST00000477836 KRTAP26-1Q6PEX3 210 aa6.07□□□□□ -1.44
SMARCB1-206ENST00000477836 SPINK6Q6UWN8 80 aa6.07□□□□□ -1.44
SMARCB1-206ENST00000477836 ORAOV1Q8WV07 137 aa6.07□□□□□ -1.44
SMARCB1-206ENST00000477836 PRO1933Q9H354 126 aa6.07□□□□□ -1.44
SMARCB1-206ENST00000477836 ZNF815PA8K554 130 aa6.06□□□□□ -1.44
SMARCB1-206ENST00000477836 SLC25A34Q6PIV7 304 aa6.06□□□□□ -1.44
SMARCB1-206ENST00000477836 PCP2Q8IVA1 136 aa6.06□□□□□ -1.44
SMARCB1-206ENST00000477836 COX7B2Q8TF08 81 aa6.06□□□□□ -1.44
SMARCB1-206ENST00000477836 C14orf144Q96I85 54 aa6.06□□□□□ -1.44
SMARCB1-206ENST00000477836 TOMM7Q9P0U1 55 aa6.06□□□□□ -1.44
SMARCB1-206ENST00000477836 UQCR10Q9UDW1 63 aa6.06□□□□□ -1.44
SMARCB1-206ENST00000477836 SPAG11BQ08648 103 aa6.05□□□□□ -1.44
SMARCB1-206ENST00000477836 SFTA2Q6UW10 78 aa6.05□□□□□ -1.44
SMARCB1-206ENST00000477836 Q8IZM0 81 aa6.05□□□□□ -1.44
SMARCB1-206ENST00000477836 TP73-AS1Q9UF72 201 aa6.05□□□□□ -1.44
SMARCB1-206ENST00000477836 MYMXA0A1B0GTQ4 84 aa6.04□□□□□ -1.44
SMARCB1-206ENST00000477836 NDUFA1O15239 70 aa6.04□□□□□ -1.44
SMARCB1-206ENST00000477836 DLEU1O43261 78 aa6.04□□□□□ -1.44
SMARCB1-206ENST00000477836 LCE2DQ5TA82 110 aaPredicted RBP6.04□□□□□ -1.44
SMARCB1-206ENST00000477836 CFAP161Q6P656 301 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms