RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 DOT1LQ8TEK3 1739 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 ACACBO00763 2458 aa1.34□□□□□ -2.19
SMNDC1-205ENST00000477763 PTPRFP10586 1907 aa1.34□□□□□ -2.19
SMNDC1-205ENST00000477763 HEATR1Q9H583 2144 aaKnown RBP1.34□□□□□ -2.19
SMNDC1-205ENST00000477763 DNAH12Q6ZR08 3092 aa1.34□□□□□ -2.19
SMNDC1-205ENST00000477763 MYO7AQ13402 2215 aa1.34□□□□□ -2.19
SMNDC1-205ENST00000477763 TMEM14DPA8MWL7 114 aa1.34□□□□□ -2.19
SMNDC1-205ENST00000477763 ZNF720Q7Z2F6 126 aa1.34□□□□□ -2.19
SMNDC1-205ENST00000477763 C5orf56Q8N8D9 126 aa1.34□□□□□ -2.19
SMNDC1-205ENST00000477763 BPESC1Q9GZL8 116 aa1.34□□□□□ -2.19
SMNDC1-205ENST00000477763 V9GYH0 126 aa1.34□□□□□ -2.19
SMNDC1-205ENST00000477763 PLXNA2O75051 1894 aa1.34□□□□□ -2.19
SMNDC1-205ENST00000477763 PLXNA4Q9HCM2 1894 aa1.34□□□□□ -2.19
SMNDC1-205ENST00000477763 MYOFQ9NZM1 2061 aa1.34□□□□□ -2.19
SMNDC1-205ENST00000477763 MAP1BP46821 2468 aaKnown RBP1.34□□□□□ -2.2
SMNDC1-205ENST00000477763 CHD9Q3L8U1 2897 aa1.34□□□□□ -2.2
SMNDC1-205ENST00000477763 FAM186AA6NE01 2351 aa1.34□□□□□ -2.2
SMNDC1-205ENST00000477763 FREM1Q5H8C1 2179 aa1.34□□□□□ -2.2
SMNDC1-205ENST00000477763 ZFHX4Q86UP3 3567 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 NINQ8N4C6 2090 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 ZNF462Q96JM2 2506 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 CEP192Q8TEP8 1941 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 A0A0G2JND7 137 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 HMGN4O00479 90 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 PPP1R17O96001 155 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 SPAG11BQ08648 103 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 ADIRFQ15847 76 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 SPAG11AQ6PDA7 123 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 ALKAL2Q6UX46 152 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 LINC01600Q96MT4 127 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 AMELXQ99217 191 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 ST20Q9HBF5 79 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 SPCS1Q9Y6A9 102 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 V9GYV3 84 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 CDH23Q9H251 3354 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 KIF20BQ96Q89 1820 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 MYO18BQ8IUG5 2567 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 MAST4O15021 2626 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 CACNA1HO95180 2353 aa1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 GCN1Q92616 2671 aaKnown RBP1.33□□□□□ -2.2
SMNDC1-205ENST00000477763 FAM208AQ9UK61 1670 aaKnown RBP1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 EDC4Q6P2E9 1401 aaKnown RBP1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 DCHS1Q96JQ0 3298 aa1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 TIAM2Q8IVF5 1701 aa1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 TRBV25-1A0A075B6N4 114 aa1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 A0A087WTM6 91 aa1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 SMIM11AP58511 58 aa1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 PMCHL1Q16048 86 aa1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 ETDBQ3ZM63 59 aa1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 TMEM170BQ5T4T1 132 aa1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 LINC00208Q96KT6 92 aa1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 HIGD1BQ9P298 99 aa1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 R4GMQ9 66 aa1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 CEP250Q9BV73 2442 aa1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 BAZ2BQ9UIF8 2168 aaKnown RBP1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 MYH8P13535 1937 aa1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 BPTFQ12830 3046 aa1.32□□□□□ -2.2
SMNDC1-205ENST00000477763 XIRP2A4UGR9 3374 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 GVINP1Q7Z2Y8 2422 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 MED12LQ86YW9 2145 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 PARP14Q460N5 1801 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 TEP1Q99973 2627 aaKnown RBP1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 CHD7Q9P2D1 2997 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 USP24Q9UPU5 2620 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 SMIM31A0A1B0GVY4 71 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 A0A1W2PPM0 123 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 SAA2P0DJI9 122 aaPredicted RBP1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 CCL18P55774 89 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 CAV3P56539 151 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 Q6ZQY7 126 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 PIEZO2Q9H5I5 2752 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 DNAH14Q0VDD8 3507 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 PTPN13Q12923 2485 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 NRXN2Q9P2S2 1712 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 TECTAO75443 2155 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 SIP14410 1827 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 MYO15AQ9UKN7 3530 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 MRC1P22897 1456 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 C5orf42Q9H799 3197 aa1.31□□□□□ -2.2
SMNDC1-205ENST00000477763 PTPRDP23468 1912 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 CHD3Q12873 2000 aaKnown RBP1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 NBEAQ8NFP9 2946 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 ABCA12Q86UK0 2595 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 SPAG17Q6Q759 2223 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 UNC13CQ8NB66 2214 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 LTN1O94822 1766 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 KANTRA0A1W2PQU2 76 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 F2Z2F3 143 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 KRTAP10-4P60372 401 aaPredicted RBP1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 SNRPFP62306 86 aaKnown RBP1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 WFDC2Q14508 124 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 NMSQ5H8A3 153 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 SFTA2Q6UW10 78 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 FAM223AQ8IWN6 122 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 OBSCN-AS1Q96MR7 158 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 WFDC6Q9BQY6 131 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 TMEM14BQ9NUH8 114 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 DOCK2Q92608 1830 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 DSPP15924 2871 aaKnown RBP1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 FLG2Q5D862 2391 aaPredicted RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms