RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CCL25O15444 150 aa2.72□□□□□ -1.97
CKS1B-207ENST00000477676 ATP5LO75964 103 aa2.72□□□□□ -1.97
CKS1B-207ENST00000477676 FGF6P10767 208 aa2.72□□□□□ -1.97
CKS1B-207ENST00000477676 KRTAP12-2P59991 146 aa2.72□□□□□ -1.97
CKS1B-207ENST00000477676 MEF2BQ02080 365 aaPredicted RBP2.72□□□□□ -1.97
CKS1B-207ENST00000477676 SYCNQ0VAF6 134 aa2.72□□□□□ -1.97
CKS1B-207ENST00000477676 C9orf116Q5BN46 136 aaPredicted RBP2.72□□□□□ -1.97
CKS1B-207ENST00000477676 LINC00242Q5T6M2 205 aa2.72□□□□□ -1.97
CKS1B-207ENST00000477676 NUP35Q8NFH5 326 aa2.72□□□□□ -1.97
CKS1B-207ENST00000477676 MED28Q9H204 178 aa2.72□□□□□ -1.97
CKS1B-207ENST00000477676 IGLV4-69A0A075B6H9 119 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 BORCS7-ASMTA0A0B4J1R7 106 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 IGHV1-58A0A0C4DH39 117 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 FAM168BA1KXE4 195 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 IGLV7-43P04211 117 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 ESDP10768 282 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 CTRLP40313 264 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 CACNG7P62955 275 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 CD164Q04900 197 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 CENPWQ5EE01 88 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 C1orf137Q5JT78 98 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 FAM19A5Q7Z5A7 132 aaPredicted RBP2.71□□□□□ -1.98
CKS1B-207ENST00000477676 ZNF664Q8N3J9 261 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 OR5A1Q8NGJ0 315 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 SFT2D1Q8WV19 159 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 CNFNQ9BYD5 112 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 LINC00474Q9P2X8 69 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 PRO0628Q9UI54 55 aa2.71□□□□□ -1.98
CKS1B-207ENST00000477676 IGLV4-3A0A075B6K6 122 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 TGIF2-C20orf24A0A0A6YYL0 155 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 LOC107984640A0A0U1RRK4 108 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 SDHAF1A6NFY7 115 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 H0Y9J4 135 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 MT-ND6P03923 174 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 AKR1D1P51857 326 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 PRR4Q16378 134 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 FA2HQ7L5A8 372 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 C9orf62Q8N4C0 152 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 KCNRGQ8N5I3 272 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 FAM213BQ8TBF2 198 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 FAM104AQ969W3 186 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 C14orf144Q96I85 54 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 SIGMAR1Q99720 223 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 RNASE7Q9H1E1 156 aaKnown RBP2.7□□□□□ -1.98
CKS1B-207ENST00000477676 PPDPFQ9H3Y8 114 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 MAP1LC3AQ9H492 121 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 CDC42SE2Q9NRR3 84 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 PYGO1Q9Y3Y4 419 aa2.7□□□□□ -1.98
CKS1B-207ENST00000477676 TINCRA0A1B0GVN0 87 aa2.69□□□□□ -1.98
CKS1B-207ENST00000477676 F2Z2F3 143 aa2.69□□□□□ -1.98
CKS1B-207ENST00000477676 K7EN84 100 aa2.69□□□□□ -1.98
CKS1B-207ENST00000477676 BCL2L11O43521 198 aa2.69□□□□□ -1.98
CKS1B-207ENST00000477676 NCR2O95944 276 aa2.69□□□□□ -1.98
CKS1B-207ENST00000477676 APCSP02743 223 aa2.69□□□□□ -1.98
CKS1B-207ENST00000477676 TRGC1P0CF51 173 aa2.69□□□□□ -1.98
CKS1B-207ENST00000477676 POLR2KP53803 58 aaKnown RBP2.69□□□□□ -1.98
CKS1B-207ENST00000477676 NDUFV3P56181 108 aaKnown RBP2.69□□□□□ -1.98
CKS1B-207ENST00000477676 RNASE13Q5GAN3 156 aaKnown RBP2.69□□□□□ -1.98
CKS1B-207ENST00000477676 AMMECR1LQ6DCA0 310 aa2.69□□□□□ -1.98
CKS1B-207ENST00000477676 DIRC1Q969H9 104 aa2.69□□□□□ -1.98
CKS1B-207ENST00000477676 BORCS7Q96B45 105 aa2.69□□□□□ -1.98
CKS1B-207ENST00000477676 TMEM126AQ9H061 195 aa2.69□□□□□ -1.98
CKS1B-207ENST00000477676 TMEM242Q9NWH2 141 aa2.69□□□□□ -1.98
CKS1B-207ENST00000477676 IGLV1-50A0A075B6I6 118 aa2.68□□□□□ -1.98
CKS1B-207ENST00000477676 TRBV6-5A0A0K0K1A5 114 aa2.68□□□□□ -1.98
CKS1B-207ENST00000477676 C20orf202A1L168 122 aa2.68□□□□□ -1.98
CKS1B-207ENST00000477676 APOMO95445 188 aa2.68□□□□□ -1.98
CKS1B-207ENST00000477676 ZNF25P17030 456 aaPredicted RBP2.68□□□□□ -1.98
CKS1B-207ENST00000477676 RAB5AP20339 215 aa2.68□□□□□ -1.98
CKS1B-207ENST00000477676 CKS1BP61024 79 aa2.68□□□□□ -1.98
CKS1B-207ENST00000477676 RPL18AQ02543 176 aaKnown RBP2.68□□□□□ -1.98
CKS1B-207ENST00000477676 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
CKS1B-207ENST00000477676 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
CKS1B-207ENST00000477676 C5orf38Q86SI9 138 aa2.68□□□□□ -1.98
CKS1B-207ENST00000477676 MRAP2Q96G30 205 aa2.68□□□□□ -1.98
CKS1B-207ENST00000477676 GNG13Q9P2W3 67 aa2.68□□□□□ -1.98
CKS1B-207ENST00000477676 FSIP2Q5CZC0 6907 aa2.68□□□□□ -1.98
CKS1B-207ENST00000477676 A0A087X002 238 aa2.67□□□□□ -1.98
CKS1B-207ENST00000477676 TRAV1-1A0A0B4J248 108 aa2.67□□□□□ -1.98
CKS1B-207ENST00000477676 A0A0U1RQV1 116 aa2.67□□□□□ -1.98
CKS1B-207ENST00000477676 UMAD1C9J7I0 102 aa2.67□□□□□ -1.98
CKS1B-207ENST00000477676 E9PLD3 99 aa2.67□□□□□ -1.98
CKS1B-207ENST00000477676 I3L3M4 83 aa2.67□□□□□ -1.98
CKS1B-207ENST00000477676 COX7A2LO14548 114 aa2.67□□□□□ -1.98
CKS1B-207ENST00000477676 DDTP30046 118 aa2.67□□□□□ -1.98
CKS1B-207ENST00000477676 GNG4P50150 75 aa2.67□□□□□ -1.98
CKS1B-207ENST00000477676 SS18Q15532 418 aa2.67□□□□□ -1.98
CKS1B-207ENST00000477676 BATFQ16520 125 aa2.67□□□□□ -1.98
CKS1B-207ENST00000477676 Q6ZUT4 128 aa2.67□□□□□ -1.98
CKS1B-207ENST00000477676 COMMD7Q86VX2 200 aa2.67□□□□□ -1.98
CKS1B-207ENST00000477676 SMIM20Q8N5G0 67 aa2.67□□□□□ -1.98
CKS1B-207ENST00000477676 CAMK2N2Q96S95 79 aa2.67□□□□□ -1.98
CKS1B-207ENST00000477676 RPP21Q9H633 154 aaKnown RBP2.67□□□□□ -1.98
CKS1B-207ENST00000477676 TRAV13-1A0A0B4J241 112 aa2.66□□□□□ -1.98
CKS1B-207ENST00000477676 TRBV27A0A0K0K1C4 114 aa2.66□□□□□ -1.98
CKS1B-207ENST00000477676 A8MU10 97 aa2.66□□□□□ -1.98
CKS1B-207ENST00000477676 SMKR1H3BMG3 65 aa2.66□□□□□ -1.98
CKS1B-207ENST00000477676 RAB5BP61020 215 aa2.66□□□□□ -1.98
CKS1B-207ENST00000477676 RPS28P62857 69 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms