RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 JMJD7-PLA2G4BH0Y9G9 81 aa5.83□□□□□ -1.48
PTPRD-209ENST00000477552 MALP21145 153 aa5.83□□□□□ -1.48
PTPRD-209ENST00000477552 CCL18P55774 89 aa5.83□□□□□ -1.48
PTPRD-209ENST00000477552 S100A7L2Q5SY68 101 aa5.83□□□□□ -1.48
PTPRD-209ENST00000477552 WFDC10AQ9H1F0 79 aa5.83□□□□□ -1.48
PTPRD-209ENST00000477552 KLK5Q9Y337 293 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-209ENST00000477552 TENM4Q6N022 2769 aa5.83□□□□□ -1.48
PTPRD-209ENST00000477552 NDUFV3P56181 108 aaKnown RBP5.82□□□□□ -1.48
PTPRD-209ENST00000477552 LELP1Q5T871 98 aa5.82□□□□□ -1.48
PTPRD-209ENST00000477552 SDIM1Q6ZPB5 146 aa5.82□□□□□ -1.48
PTPRD-209ENST00000477552 WFDC9Q8NEX5 89 aa5.82□□□□□ -1.48
PTPRD-209ENST00000477552 ZFHX3Q15911 3703 aa5.82□□□□□ -1.48
PTPRD-209ENST00000477552 A0A0U1RRA0 63 aa5.81□□□□□ -1.48
PTPRD-209ENST00000477552 C5orf38Q86SI9 138 aa5.81□□□□□ -1.48
PTPRD-209ENST00000477552 LINC00337Q8N6G1 96 aa5.81□□□□□ -1.48
PTPRD-209ENST00000477552 SMIM11BQ8TCY0 68 aa5.81□□□□□ -1.48
PTPRD-209ENST00000477552 ORMDL1Q9P0S3 153 aa5.81□□□□□ -1.48
PTPRD-209ENST00000477552 UNC79Q9P2D8 2635 aa5.8□□□□□ -1.48
PTPRD-209ENST00000477552 IGKV2-28A0A075B6P5 120 aa5.8□□□□□ -1.48
PTPRD-209ENST00000477552 IGKV3OR2-268A0A0C4DH90 116 aa5.8□□□□□ -1.48
PTPRD-209ENST00000477552 TMEM256-PLSCR3K7ERE1 68 aa5.8□□□□□ -1.48
PTPRD-209ENST00000477552 IGKV2D-28P01615 120 aa5.8□□□□□ -1.48
PTPRD-209ENST00000477552 XCL1P47992 114 aa5.8□□□□□ -1.48
PTPRD-209ENST00000477552 REG3AQ06141 175 aa5.8□□□□□ -1.48
PTPRD-209ENST00000477552 OR13C6PQ8NH95 151 aa5.8□□□□□ -1.48
PTPRD-209ENST00000477552 OBSCN-AS1Q96MR7 158 aa5.8□□□□□ -1.48
PTPRD-209ENST00000477552 ITPR2Q14571 2701 aa5.79□□□□□ -1.48
PTPRD-209ENST00000477552 NOTCH3Q9UM47 2321 aa5.79□□□□□ -1.48
PTPRD-209ENST00000477552 GVQW2A0A096LPI5 108 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-209ENST00000477552 ANGP03950 147 aaKnown RBP5.79□□□□□ -1.48
PTPRD-209ENST00000477552 PFN2P35080 140 aa5.79□□□□□ -1.48
PTPRD-209ENST00000477552 C4orf48Q5BLP8 95 aa5.79□□□□□ -1.48
PTPRD-209ENST00000477552 CHCHD10Q8WYQ3 142 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-209ENST00000477552 LINC00167Q96N53 147 aa5.79□□□□□ -1.48
PTPRD-209ENST00000477552 KMT2BQ9UMN6 2715 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-209ENST00000477552 JMJD1CQ15652 2540 aa5.79□□□□□ -1.48
PTPRD-209ENST00000477552 A0A0J9YWU9 116 aa5.78□□□□□ -1.48
PTPRD-209ENST00000477552 IGHV4-30-4P0DP06 118 aa5.78□□□□□ -1.48
PTPRD-209ENST00000477552 PDE6GP18545 87 aa5.78□□□□□ -1.48
PTPRD-209ENST00000477552 ATP5EP2Q5VTU8 51 aa5.78□□□□□ -1.48
PTPRD-209ENST00000477552 PRR34Q9NV39 138 aa5.78□□□□□ -1.48
PTPRD-209ENST00000477552 KIAA0087Q14695 138 aa5.77□□□□□ -1.49
PTPRD-209ENST00000477552 LINC00269Q8N2A0 174 aa5.77□□□□□ -1.49
PTPRD-209ENST00000477552 Q8NAQ8 132 aa5.77□□□□□ -1.49
PTPRD-209ENST00000477552 SETD2Q9BYW2 2564 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-209ENST00000477552 MTORP42345 2549 aa5.76□□□□□ -1.49
PTPRD-209ENST00000477552 TRBV7-6A0A0J9YX20 115 aa5.76□□□□□ -1.49
PTPRD-209ENST00000477552 KRTAP10-3P60369 221 aa5.76□□□□□ -1.49
PTPRD-209ENST00000477552 DEFB135Q30KP9 77 aa5.76□□□□□ -1.49
PTPRD-209ENST00000477552 HELZ2Q9BYK8 2649 aaKnown RBP5.76□□□□□ -1.49
PTPRD-209ENST00000477552 AKAP9Q99996 3911 aa5.75□□□□□ -1.49
PTPRD-209ENST00000477552 LECT2O14960 151 aa5.75□□□□□ -1.49
PTPRD-209ENST00000477552 C2CD3Q4AC94 2353 aa5.74□□□□□ -1.49
PTPRD-209ENST00000477552 ACANP16112 2415 aa5.74□□□□□ -1.49
PTPRD-209ENST00000477552 NIPBLQ6KC79 2804 aaeCLIP5.74□□□□□ -1.49
PTPRD-209ENST00000477552 SPAG11BQ08648 103 aa5.74□□□□□ -1.49
PTPRD-209ENST00000477552 Q6JHZ5 121 aa5.74□□□□□ -1.49
PTPRD-209ENST00000477552 GAGE2AQ6NT46 116 aa5.74□□□□□ -1.49
PTPRD-209ENST00000477552 Q8N814 137 aa5.74□□□□□ -1.49
PTPRD-209ENST00000477552 FAM218AQ96MZ4 157 aa5.74□□□□□ -1.49
PTPRD-209ENST00000477552 C11orf68Q9H3H3 251 aaKnown RBP5.74□□□□□ -1.49
PTPRD-209ENST00000477552 ATOX1O00244 68 aa5.73□□□□□ -1.49
PTPRD-209ENST00000477552 CCKP06307 115 aa5.73□□□□□ -1.49
PTPRD-209ENST00000477552 A0A087WYN8 130 aa5.72□□□□□ -1.49
PTPRD-209ENST00000477552 A0A096LPF7 62 aa5.72□□□□□ -1.49
PTPRD-209ENST00000477552 TRBV10-3A0A0K0K1G6 114 aa5.72□□□□□ -1.49
PTPRD-209ENST00000477552 INAFM1C9JVW0 142 aa5.72□□□□□ -1.49
PTPRD-209ENST00000477552 C2orf48Q96LS8 159 aa5.72□□□□□ -1.49
PTPRD-209ENST00000477552 CSMD2Q7Z408 3487 aa5.71□□□□□ -1.49
PTPRD-209ENST00000477552 GCN1Q92616 2671 aaKnown RBP5.71□□□□□ -1.5
PTPRD-209ENST00000477552 ZNF561-AS1K7EIQ3 104 aa5.71□□□□□ -1.5
PTPRD-209ENST00000477552 UQCRQO14949 82 aa5.71□□□□□ -1.5
PTPRD-209ENST00000477552 BCE1O60756 84 aa5.71□□□□□ -1.5
PTPRD-209ENST00000477552 NHLRC4P0CG21 123 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-209ENST00000477552 Q9HAA7 133 aa5.71□□□□□ -1.5
PTPRD-209ENST00000477552 C22orf24Q9Y442 160 aa5.71□□□□□ -1.5
PTPRD-209ENST00000477552 NSD1Q96L73 2696 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-209ENST00000477552 hADV29S1A0JD25 119 aa5.7□□□□□ -1.5
PTPRD-209ENST00000477552 IGLV6-57P01721 117 aa5.7□□□□□ -1.5
PTPRD-209ENST00000477552 EGFEM1PQ0D2K5 195 aa5.7□□□□□ -1.5
PTPRD-209ENST00000477552 LYPD5Q6UWN5 251 aa5.7□□□□□ -1.5
PTPRD-209ENST00000477552 LINC00575Q6W349 94 aa5.7□□□□□ -1.5
PTPRD-209ENST00000477552 NOTCH2Q04721 2471 aa5.7□□□□□ -1.5
PTPRD-209ENST00000477552 LOC110117498A0A087WWA1 95 aa5.69□□□□□ -1.5
PTPRD-209ENST00000477552 FAM236AA0A1B0GUQ0 79 aa5.69□□□□□ -1.5
PTPRD-209ENST00000477552 FAM236BA0A1B0GV22 79 aa5.69□□□□□ -1.5
PTPRD-209ENST00000477552 CYSRT1A8MQ03 144 aa5.69□□□□□ -1.5
PTPRD-209ENST00000477552 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-209ENST00000477552 DIRC1Q969H9 104 aa5.69□□□□□ -1.5
PTPRD-209ENST00000477552 SMR3AQ99954 134 aa5.69□□□□□ -1.5
PTPRD-209ENST00000477552 UBL5Q9BZL1 73 aa5.69□□□□□ -1.5
PTPRD-209ENST00000477552 KLK12Q9UKR0 248 aa5.69□□□□□ -1.5
PTPRD-209ENST00000477552 NANOS2P60321 138 aaKnown RBP5.68□□□□□ -1.5
PTPRD-209ENST00000477552 HIST1H4AP62805 103 aaKnown RBP5.68□□□□□ -1.5
PTPRD-209ENST00000477552 RBM3P98179 157 aaKnown RBP5.68□□□□□ -1.5
PTPRD-209ENST00000477552 C6orf99Q4VX62 202 aa5.68□□□□□ -1.5
PTPRD-209ENST00000477552 CLPSL2Q6UWE3 100 aa5.68□□□□□ -1.5
PTPRD-209ENST00000477552 C14orf132Q9NPU4 83 aa5.68□□□□□ -1.5
PTPRD-209ENST00000477552 FN1P02751 2386 aaKnown RBP5.67□□□□□ -1.5
PTPRD-209ENST00000477552 IGLV10-54A0A075B6I4 117 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms