RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TMEM223A0PJW6 202 aa9.94□□□□□ -0.82
SEC13-215ENST00000477547 SLPIP03973 132 aa9.94□□□□□ -0.82
SEC13-215ENST00000477547 KIAA0087Q14695 138 aa9.94□□□□□ -0.82
SEC13-215ENST00000477547 COX7B2Q8TF08 81 aa9.94□□□□□ -0.82
SEC13-215ENST00000477547 IGLV5-39A0A0G2JS06 123 aa9.93□□□□□ -0.82
SEC13-215ENST00000477547 NDUFA1O15239 70 aa9.93□□□□□ -0.82
SEC13-215ENST00000477547 LINC01620Q4KN68 170 aa9.93□□□□□ -0.82
SEC13-215ENST00000477547 Q6ZRU5 148 aa9.93□□□□□ -0.82
SEC13-215ENST00000477547 GCSHP23434 173 aa9.92□□□□□ -0.82
SEC13-215ENST00000477547 CKS1BP61024 79 aa9.92□□□□□ -0.82
SEC13-215ENST00000477547 C2orf82Q6UX34 121 aa9.92□□□□□ -0.82
SEC13-215ENST00000477547 APOBP04114 4563 aaKnown RBP9.91□□□□□ -0.82
SEC13-215ENST00000477547 F8WDY8 70 aa9.91□□□□□ -0.82
SEC13-215ENST00000477547 CXCL5P42830 114 aa9.91□□□□□ -0.82
SEC13-215ENST00000477547 HERVK_113P61574 105 aa9.91□□□□□ -0.82
SEC13-215ENST00000477547 C6orf226Q5I0X4 101 aa9.91□□□□□ -0.82
SEC13-215ENST00000477547 C9orf163Q8N9P6 203 aa9.91□□□□□ -0.82
SEC13-215ENST00000477547 C10orf25Q5T742 122 aa9.89□□□□□ -0.83
SEC13-215ENST00000477547 UNQ6190/PRO20217Q6UXQ8 127 aa9.89□□□□□ -0.83
SEC13-215ENST00000477547 KRTAP10-1P60331 282 aa9.88□□□□□ -0.83
SEC13-215ENST00000477547 ATOH7Q8N100 152 aa9.88□□□□□ -0.83
SEC13-215ENST00000477547 C6orf48Q9UBA6 75 aa9.88□□□□□ -0.83
SEC13-215ENST00000477547 TRBV30A0A0K0K1B3 111 aa9.87□□□□□ -0.83
SEC13-215ENST00000477547 CDK2AP2O75956 126 aa9.87□□□□□ -0.83
SEC13-215ENST00000477547 AKR1D1P51857 326 aa9.87□□□□□ -0.83
SEC13-215ENST00000477547 PKIGQ9Y2B9 76 aa9.87□□□□□ -0.83
SEC13-215ENST00000477547 LEPROTO15243 131 aa9.85□□□□□ -0.83
SEC13-215ENST00000477547 TSPEAR-AS2P59090 65 aa9.85□□□□□ -0.83
SEC13-215ENST00000477547 RNF151Q2KHN1 245 aa9.85□□□□□ -0.83
SEC13-215ENST00000477547 PLEKHB2Q96CS7 222 aa9.85□□□□□ -0.83
SEC13-215ENST00000477547 LOC107984640A0A0U1RRK4 108 aa9.84□□□□□ -0.83
SEC13-215ENST00000477547 E9PLD3 99 aa9.84□□□□□ -0.83
SEC13-215ENST00000477547 RPL18AQ02543 176 aaKnown RBP9.84□□□□□ -0.83
SEC13-215ENST00000477547 SFTA2Q6UW10 78 aa9.84□□□□□ -0.83
SEC13-215ENST00000477547 Q8N1X5 172 aa9.84□□□□□ -0.83
SEC13-215ENST00000477547 STPG4Q8N801 248 aa9.84□□□□□ -0.83
SEC13-215ENST00000477547 DNAH5Q8TE73 4624 aa9.84□□□□□ -0.83
SEC13-215ENST00000477547 J3QQQ9 107 aa9.83□□□□□ -0.84
SEC13-215ENST00000477547 SCGB1D1O95968 90 aa9.83□□□□□ -0.84
SEC13-215ENST00000477547 LGALS3P17931 250 aaKnown RBP9.83□□□□□ -0.84
SEC13-215ENST00000477547 C9orf116Q5BN46 136 aaPredicted RBP9.83□□□□□ -0.84
SEC13-215ENST00000477547 SDIM1Q6ZPB5 146 aa9.83□□□□□ -0.84
SEC13-215ENST00000477547 A0A096LNI7 61 aa9.82□□□□□ -0.84
SEC13-215ENST00000477547 ZNF625Q96I27 306 aaPredicted RBP9.82□□□□□ -0.84
SEC13-215ENST00000477547 NDUFA12Q9UI09 145 aa9.82□□□□□ -0.84
SEC13-215ENST00000477547 IGKV2-24A0A0C4DH68 120 aa9.82□□□□□ -0.84
SEC13-215ENST00000477547 CHTF8P0CG12 524 aa9.82□□□□□ -0.84
SEC13-215ENST00000477547 ANKRD39Q53RE8 183 aa9.81□□□□□ -0.84
SEC13-215ENST00000477547 Q6ZSA8 131 aa9.81□□□□□ -0.84
SEC13-215ENST00000477547 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.81□□□□□ -0.84
SEC13-215ENST00000477547 IGKV2D-26A0A0A0MRZ7 120 aa9.8□□□□□ -0.84
SEC13-215ENST00000477547 MYMXA0A1B0GTQ4 84 aa9.8□□□□□ -0.84
SEC13-215ENST00000477547 NDUFC2-KCTD14E9PQ53 114 aa9.8□□□□□ -0.84
SEC13-215ENST00000477547 TLX1NBP0CAT3 122 aa9.8□□□□□ -0.84
SEC13-215ENST00000477547 GAGE2BQ13066 116 aa9.8□□□□□ -0.84
SEC13-215ENST00000477547 FAM30AQ9NZY2 134 aa9.8□□□□□ -0.84
SEC13-215ENST00000477547 ERG28Q9UKR5 140 aa9.8□□□□□ -0.84
SEC13-215ENST00000477547 HSBP1L1C9JCN9 74 aa9.79□□□□□ -0.84
SEC13-215ENST00000477547 PANO1I0J062 215 aa9.79□□□□□ -0.84
SEC13-215ENST00000477547 NMUP48645 174 aa9.79□□□□□ -0.84
SEC13-215ENST00000477547 PTTG1IPP53801 180 aa9.79□□□□□ -0.84
SEC13-215ENST00000477547 HERV-K104P63124 156 aa9.79□□□□□ -0.84
SEC13-215ENST00000477547 MAJINQ3KP22 176 aa9.79□□□□□ -0.84
SEC13-215ENST00000477547 SPACA4Q8TDM5 124 aa9.79□□□□□ -0.84
SEC13-215ENST00000477547 HAMPP81172 84 aa9.78□□□□□ -0.84
SEC13-215ENST00000477547 JOSD1Q15040 202 aaPredicted RBP9.78□□□□□ -0.84
SEC13-215ENST00000477547 Q6ZRP5 223 aa9.78□□□□□ -0.84
SEC13-215ENST00000477547 DMBT1Q9UGM3 2413 aaPredicted RBP9.77□□□□□ -0.85
SEC13-215ENST00000477547 PFN2P35080 140 aa9.77□□□□□ -0.85
SEC13-215ENST00000477547 CIRBPQ14011 172 aaKnown RBP9.77□□□□□ -0.85
SEC13-215ENST00000477547 GAGE2EQ4V326 116 aa9.77□□□□□ -0.85
SEC13-215ENST00000477547 MEIG1Q5JSS6 88 aa9.77□□□□□ -0.85
SEC13-215ENST00000477547 LINC00474Q9P2X8 69 aa9.77□□□□□ -0.85
SEC13-215ENST00000477547 GAGE2DQ9UEU5 116 aa9.77□□□□□ -0.85
SEC13-215ENST00000477547 SCXQ7RTU7 201 aa9.76□□□□□ -0.85
SEC13-215ENST00000477547 TTTY13Q9BZ97 58 aa9.76□□□□□ -0.85
SEC13-215ENST00000477547 ZNF815PA8K554 130 aa9.75□□□□□ -0.85
SEC13-215ENST00000477547 COX17Q14061 63 aa9.74□□□□□ -0.85
SEC13-215ENST00000477547 PYY3Q5JQD4 70 aa9.74□□□□□ -0.85
SEC13-215ENST00000477547 A0A0U1RRA0 63 aa9.73□□□□□ -0.85
SEC13-215ENST00000477547 SMIM13P0DJ93 91 aa9.73□□□□□ -0.85
SEC13-215ENST00000477547 LINC00158P58513 81 aa9.73□□□□□ -0.85
SEC13-215ENST00000477547 XAGE1AQ9HD64 81 aa9.73□□□□□ -0.85
SEC13-215ENST00000477547 A0A087WYN8 130 aa9.72□□□□□ -0.85
SEC13-215ENST00000477547 A0A0J9YXY3 114 aa9.72□□□□□ -0.85
SEC13-215ENST00000477547 DPH3Q96FX2 82 aa9.72□□□□□ -0.85
SEC13-215ENST00000477547 VAMP8Q9BV40 100 aa9.72□□□□□ -0.85
SEC13-215ENST00000477547 UBR4Q5T4S7 5183 aa9.71□□□□□ -0.85
SEC13-215ENST00000477547 LINC00587B1AMM8 73 aa9.71□□□□□ -0.86
SEC13-215ENST00000477547 C9orf129Q5T035 196 aaKnown RBP9.71□□□□□ -0.86
SEC13-215ENST00000477547 PCP2Q8IVA1 136 aa9.71□□□□□ -0.86
SEC13-215ENST00000477547 CIRBP-AS1Q8TBR5 109 aa9.71□□□□□ -0.86
SEC13-215ENST00000477547 PAM16Q9Y3D7 125 aa9.71□□□□□ -0.86
SEC13-215ENST00000477547 XGP55808 180 aa9.7□□□□□ -0.86
SEC13-215ENST00000477547 FAM19A5Q7Z5A7 132 aaPredicted RBP9.7□□□□□ -0.86
SEC13-215ENST00000477547 SND1-IT1Q9HBX3 110 aa9.7□□□□□ -0.86
SEC13-215ENST00000477547 FAT1Q14517 4588 aa9.69□□□□□ -0.86
SEC13-215ENST00000477547 FAM168BA1KXE4 195 aa9.69□□□□□ -0.86
SEC13-215ENST00000477547 INAFM2P0DMQ5 153 aa9.69□□□□□ -0.86
SEC13-215ENST00000477547 SPATA45Q537H7 98 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms