RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ALKBH7Q9BT30 221 aaPredicted RBP3.91□□□□□ -1.78
RTFDC1-206ENST00000477485 IGLV7-46A0A075B6I9 117 aa3.9□□□□□ -1.79
RTFDC1-206ENST00000477485 IGKV2D-26A0A0A0MRZ7 120 aa3.9□□□□□ -1.79
RTFDC1-206ENST00000477485 S100A8P05109 93 aa3.9□□□□□ -1.79
RTFDC1-206ENST00000477485 RPL32P62910 135 aaKnown RBP3.9□□□□□ -1.79
RTFDC1-206ENST00000477485 ZC2HC1BQ5TFG8 222 aa3.9□□□□□ -1.79
RTFDC1-206ENST00000477485 NKAPP1Q8N9T2 125 aa3.9□□□□□ -1.79
RTFDC1-206ENST00000477485 LOC100996750A0A140TA64 210 aa3.89□□□□□ -1.79
RTFDC1-206ENST00000477485 A0A1B0GW15 77 aa3.89□□□□□ -1.79
RTFDC1-206ENST00000477485 SMIM27A0A1W2PRY6 76 aa3.89□□□□□ -1.79
RTFDC1-206ENST00000477485 SRP19P09132 144 aaKnown RBP3.89□□□□□ -1.79
RTFDC1-206ENST00000477485 RPL23P62829 140 aaKnown RBP3.89□□□□□ -1.79
RTFDC1-206ENST00000477485 KRTAP13-2Q52LG2 175 aa3.89□□□□□ -1.79
RTFDC1-206ENST00000477485 Q8IZM0 81 aa3.89□□□□□ -1.79
RTFDC1-206ENST00000477485 TCTE3Q8IZS6 198 aa3.89□□□□□ -1.79
RTFDC1-206ENST00000477485 ORMDL3Q8N138 153 aa3.89□□□□□ -1.79
RTFDC1-206ENST00000477485 PRELID3AQ96N28 172 aa3.89□□□□□ -1.79
RTFDC1-206ENST00000477485 LINC00167Q96N53 147 aa3.89□□□□□ -1.79
RTFDC1-206ENST00000477485 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
RTFDC1-206ENST00000477485 VCX2Q9H322 139 aa3.89□□□□□ -1.79
RTFDC1-206ENST00000477485 CYSLTR1Q9Y271 337 aa3.89□□□□□ -1.79
RTFDC1-206ENST00000477485 IGKV2-28A0A075B6P5 120 aa3.88□□□□□ -1.79
RTFDC1-206ENST00000477485 F8VRH5 84 aa3.88□□□□□ -1.79
RTFDC1-206ENST00000477485 IGKV2D-28P01615 120 aa3.88□□□□□ -1.79
RTFDC1-206ENST00000477485 PPBPP02775 128 aa3.88□□□□□ -1.79
RTFDC1-206ENST00000477485 RAB5BP61020 215 aa3.88□□□□□ -1.79
RTFDC1-206ENST00000477485 TPRXLQ17RH7 258 aa3.88□□□□□ -1.79
RTFDC1-206ENST00000477485 TMEM136Q6ZRR5 245 aa3.88□□□□□ -1.79
RTFDC1-206ENST00000477485 MAP1LC3AQ9H492 121 aa3.88□□□□□ -1.79
RTFDC1-206ENST00000477485 GEMIN7Q9H840 131 aaKnown RBP3.88□□□□□ -1.79
RTFDC1-206ENST00000477485 NAT8Q9UHE5 227 aa3.88□□□□□ -1.79
RTFDC1-206ENST00000477485 PYGO1Q9Y3Y4 419 aa3.88□□□□□ -1.79
RTFDC1-206ENST00000477485 LINC01547P58512 204 aaPredicted RBP3.87□□□□□ -1.79
RTFDC1-206ENST00000477485 PRLHP81277 87 aa3.87□□□□□ -1.79
RTFDC1-206ENST00000477485 PNRC1Q12796 327 aaPredicted RBP3.87□□□□□ -1.79
RTFDC1-206ENST00000477485 C2orf66Q6UXQ4 117 aa3.87□□□□□ -1.79
RTFDC1-206ENST00000477485 LINC01561Q8N1V8 128 aa3.87□□□□□ -1.79
RTFDC1-206ENST00000477485 LINC00337Q8N6G1 96 aa3.87□□□□□ -1.79
RTFDC1-206ENST00000477485 PPDPFQ9H3Y8 114 aa3.87□□□□□ -1.79
RTFDC1-206ENST00000477485 TP73-AS1Q9UF72 201 aa3.87□□□□□ -1.79
RTFDC1-206ENST00000477485 FAT4Q6V0I7 4981 aa3.86□□□□□ -1.79
RTFDC1-206ENST00000477485 SCO1O75880 301 aa3.86□□□□□ -1.79
RTFDC1-206ENST00000477485 CXCL5P42830 114 aa3.86□□□□□ -1.79
RTFDC1-206ENST00000477485 HERVK_113P63121 156 aa3.86□□□□□ -1.79
RTFDC1-206ENST00000477485 FAM229BQ4G0N7 80 aa3.86□□□□□ -1.79
RTFDC1-206ENST00000477485 FAM19A1Q7Z5A9 133 aa3.86□□□□□ -1.79
RTFDC1-206ENST00000477485 CDKN2A-AS1Q9UH64 79 aa3.86□□□□□ -1.79
RTFDC1-206ENST00000477485 A0A1B0GXF2 115 aa3.85□□□□□ -1.79
RTFDC1-206ENST00000477485 SEC11AP67812 179 aa3.85□□□□□ -1.79
RTFDC1-206ENST00000477485 ORMDL2Q53FV1 153 aa3.85□□□□□ -1.79
RTFDC1-206ENST00000477485 AKAP14Q86UN6 197 aa3.85□□□□□ -1.79
RTFDC1-206ENST00000477485 COX7B2Q8TF08 81 aa3.85□□□□□ -1.79
RTFDC1-206ENST00000477485 PAPPA-AS1Q5QFB9 102 aa3.84□□□□□ -1.79
RTFDC1-206ENST00000477485 C3orf22Q8N5N4 141 aa3.84□□□□□ -1.79
RTFDC1-206ENST00000477485 Q8N8P6 123 aa3.84□□□□□ -1.79
RTFDC1-206ENST00000477485 AMELXQ99217 191 aa3.84□□□□□ -1.79
RTFDC1-206ENST00000477485 SMIM1B2RUZ4 78 aa3.83□□□□□ -1.8
RTFDC1-206ENST00000477485 TMEM238C9JI98 176 aa3.83□□□□□ -1.8
RTFDC1-206ENST00000477485 SPINK8P0C7L1 97 aa3.83□□□□□ -1.8
RTFDC1-206ENST00000477485 PFN2P35080 140 aa3.83□□□□□ -1.8
RTFDC1-206ENST00000477485 PEA15Q15121 130 aa3.83□□□□□ -1.8
RTFDC1-206ENST00000477485 ATP5L2Q7Z4Y8 100 aa3.83□□□□□ -1.8
RTFDC1-206ENST00000477485 KRTAP13-1Q8IUC0 172 aa3.83□□□□□ -1.8
RTFDC1-206ENST00000477485 HIGD2AQ9BW72 106 aa3.83□□□□□ -1.8
RTFDC1-206ENST00000477485 LAMTOR2Q9Y2Q5 125 aa3.83□□□□□ -1.8
RTFDC1-206ENST00000477485 IGIPA6NJ69 53 aa3.82□□□□□ -1.8
RTFDC1-206ENST00000477485 C9JQL5 133 aa3.82□□□□□ -1.8
RTFDC1-206ENST00000477485 ATP5LO75964 103 aa3.82□□□□□ -1.8
RTFDC1-206ENST00000477485 SRSF3P84103 164 aaKnown RBP3.82□□□□□ -1.8
RTFDC1-206ENST00000477485 PDZD11Q5EBL8 140 aa3.82□□□□□ -1.8
RTFDC1-206ENST00000477485 FAM19A3Q7Z5A8 133 aa3.82□□□□□ -1.8
RTFDC1-206ENST00000477485 CBLN2Q8IUK8 224 aa3.82□□□□□ -1.8
RTFDC1-206ENST00000477485 TMEM126AQ9H061 195 aa3.82□□□□□ -1.8
RTFDC1-206ENST00000477485 IGLV5-37A0A075B6J1 123 aa3.81□□□□□ -1.8
RTFDC1-206ENST00000477485 NPSP0C0P6 89 aa3.81□□□□□ -1.8
RTFDC1-206ENST00000477485 G0S2P27469 103 aa3.81□□□□□ -1.8
RTFDC1-206ENST00000477485 RAB14P61106 215 aa3.81□□□□□ -1.8
RTFDC1-206ENST00000477485 DAND5Q8N907 189 aa3.81□□□□□ -1.8
RTFDC1-206ENST00000477485 SCGB3A1Q96QR1 104 aa3.81□□□□□ -1.8
RTFDC1-206ENST00000477485 NXT2Q9NPJ8 142 aaKnown RBP3.81□□□□□ -1.8
RTFDC1-206ENST00000477485 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
RTFDC1-206ENST00000477485 PRSS47A8MTI9 375 aa3.8□□□□□ -1.8
RTFDC1-206ENST00000477485 SEC61BP60468 96 aaKnown RBP3.8□□□□□ -1.8
RTFDC1-206ENST00000477485 RPL24P83731 157 aaKnown RBP3.8□□□□□ -1.8
RTFDC1-206ENST00000477485 SPAG11AQ6PDA7 123 aa3.8□□□□□ -1.8
RTFDC1-206ENST00000477485 FP248Q71RG6 208 aaPredicted RBP3.8□□□□□ -1.8
RTFDC1-206ENST00000477485 TIMM17AQ99595 171 aa3.8□□□□□ -1.8
RTFDC1-206ENST00000477485 TINCRA0A1B0GVN0 87 aa3.79□□□□□ -1.8
RTFDC1-206ENST00000477485 H3BRM9 83 aa3.79□□□□□ -1.8
RTFDC1-206ENST00000477485 K7EMI3 77 aa3.79□□□□□ -1.8
RTFDC1-206ENST00000477485 NDUFA6P56556 154 aa3.79□□□□□ -1.8
RTFDC1-206ENST00000477485 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
RTFDC1-206ENST00000477485 ASB16-AS1Q495Z4 193 aa3.79□□□□□ -1.8
RTFDC1-206ENST00000477485 ERASQ7Z444 233 aa3.79□□□□□ -1.8
RTFDC1-206ENST00000477485 Q8NBF4 154 aa3.79□□□□□ -1.8
RTFDC1-206ENST00000477485 TOMM6Q96B49 74 aa3.79□□□□□ -1.8
RTFDC1-206ENST00000477485 PLEKHB2Q96CS7 222 aa3.79□□□□□ -1.8
RTFDC1-206ENST00000477485 ZNF625Q96I27 306 aaPredicted RBP3.79□□□□□ -1.8
RTFDC1-206ENST00000477485 NDUFA12Q9UI09 145 aa3.79□□□□□ -1.8
RTFDC1-206ENST00000477485 M0R378 163 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms