RNA–Protein interactions for RNA: ENST00000477434.5

PDZRN3-206, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-206ENST00000477434 TMEM243Q9BU79 118 aa2.59□□□□□ -1.99
PDZRN3-206ENST00000477434 LINC00588Q9Y4M8 146 aa2.59□□□□□ -1.99
PDZRN3-206ENST00000477434 CSDC2Q9Y534 153 aaKnown RBP2.59□□□□□ -1.99
PDZRN3-206ENST00000477434 OBSCNQ5VST9 7968 aa2.59□□□□□ -2
PDZRN3-206ENST00000477434 FLG2Q5D862 2391 aaPredicted RBP2.59□□□□□ -2
PDZRN3-206ENST00000477434 FSIP2Q5CZC0 6907 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 TRAV8-6A0A0B4J262 113 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 NBDYA0A0U1RRE5 68 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 IGIPA6NJ69 53 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 HBDP02042 147 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 PKIAP61925 76 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 RPL39P62891 51 aaKnown RBP2.58□□□□□ -2
PDZRN3-206ENST00000477434 SMAGPQ0VAQ4 97 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 PMCHL1Q16048 86 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 PDZD11Q5EBL8 140 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 RNASEKQ6P5S7 137 aaKnown RBP2.58□□□□□ -2
PDZRN3-206ENST00000477434 C2orf66Q6UXQ4 117 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 Q6ZRN7 208 aaPredicted RBP2.58□□□□□ -2
PDZRN3-206ENST00000477434 ERASQ7Z444 233 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 SPATA12Q7Z6I5 190 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 MRPL52Q86TS9 123 aaKnown RBP2.58□□□□□ -2
PDZRN3-206ENST00000477434 FAM19A2Q8N3H0 131 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 FAM104AQ969W3 186 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 TOMM6Q96B49 74 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 PACRGQ96M98 296 aaPredicted RBP2.58□□□□□ -2
PDZRN3-206ENST00000477434 TIMM21Q9BVV7 248 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 PRO0461Q9UI25 63 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 CYSLTR1Q9Y271 337 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 UBE2D4Q9Y2X8 147 aa2.58□□□□□ -2
PDZRN3-206ENST00000477434 MRPS16Q9Y3D3 137 aaKnown RBP2.58□□□□□ -2
PDZRN3-206ENST00000477434 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.57□□□□□ -2
PDZRN3-206ENST00000477434 A0A087WX48 190 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 IGKV2-29A2NJV5 120 aaPredicted RBP2.57□□□□□ -2
PDZRN3-206ENST00000477434 TMEM262E9PQX1 116 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 K7EP13 123 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 UBE2L6O14933 153 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 SIVA1O15304 175 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 FGF6P10767 208 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 ZNF25P17030 456 aaPredicted RBP2.57□□□□□ -2
PDZRN3-206ENST00000477434 KRTAP10-1P60331 282 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 KRTAP10-8P60410 259 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 RBX1P62877 108 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 MRPS36P82909 103 aaKnown RBP2.57□□□□□ -2
PDZRN3-206ENST00000477434 MPV17L2Q567V2 206 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 LINC01556Q5JQF7 62 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 C1orf134Q5TEV5 83 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 WFDC10BQ8IUB3 73 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 UBE2DNLQ8IWF7 75 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 HIST3H2BBQ8N257 126 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 TMEM141Q96I45 108 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 SCGB3A1Q96QR1 104 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 TIMM17AQ99595 171 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 CDC42SE2Q9NRR3 84 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 SPANXA1Q9NS26 97 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 FAT4Q6V0I7 4981 aa2.57□□□□□ -2
PDZRN3-206ENST00000477434 IGLV4-60A0A075B6I1 120 aa2.56□□□□□ -2
PDZRN3-206ENST00000477434 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.56□□□□□ -2
PDZRN3-206ENST00000477434 ATP5LO75964 103 aa2.56□□□□□ -2
PDZRN3-206ENST00000477434 LEPROTL1O95214 131 aa2.56□□□□□ -2
PDZRN3-206ENST00000477434 FABP4P15090 132 aa2.56□□□□□ -2
PDZRN3-206ENST00000477434 S100A2P29034 98 aa2.56□□□□□ -2
PDZRN3-206ENST00000477434 AMMECR1LQ6DCA0 310 aa2.56□□□□□ -2
PDZRN3-206ENST00000477434 C6orf223Q8N319 242 aa2.56□□□□□ -2
PDZRN3-206ENST00000477434 ZNF664Q8N3J9 261 aa2.56□□□□□ -2
PDZRN3-206ENST00000477434 Q8N976 141 aa2.56□□□□□ -2
PDZRN3-206ENST00000477434 OR5A1Q8NGJ0 315 aa2.56□□□□□ -2
PDZRN3-206ENST00000477434 BAALCQ8WXS3 180 aa2.56□□□□□ -2
PDZRN3-206ENST00000477434 TMEM101Q96IK0 257 aa2.56□□□□□ -2
PDZRN3-206ENST00000477434 HIST1H2BLQ99880 126 aa2.56□□□□□ -2
PDZRN3-206ENST00000477434 VCX2Q9H322 139 aa2.56□□□□□ -2
PDZRN3-206ENST00000477434 HSPB8Q9UJY1 196 aa2.56□□□□□ -2
PDZRN3-206ENST00000477434 IBA57-AS1B1ANH7 110 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 H0Y9J4 135 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 CCL25O15444 150 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 PMVKQ15126 192 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 Q6ZN92 141 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 Q6ZUT4 128 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 LINC00173Q6ZV60 143 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 LINC00269Q8N2A0 174 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 C10orf126Q8N4M7 172 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 IFI27L1Q96BM0 104 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 LINC00167Q96N53 147 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 AMELXQ99217 191 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 MAP1LC3CQ9BXW4 147 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 CST9LQ9H4G1 147 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 KLK12Q9UKR0 248 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 LRP2P98164 4655 aa2.55□□□□□ -2
PDZRN3-206ENST00000477434 TRAV8-3A0A0A6YYJ7 113 aa2.54□□□□□ -2
PDZRN3-206ENST00000477434 TRAV12-1A0A0B4J245 112 aa2.54□□□□□ -2
PDZRN3-206ENST00000477434 TRAV8-4A0A0B4J246 113 aa2.54□□□□□ -2
PDZRN3-206ENST00000477434 SYS1-DBNDD2H3BUS1 97 aa2.54□□□□□ -2
PDZRN3-206ENST00000477434 IGHV3-30P01768 117 aa2.54□□□□□ -2
PDZRN3-206ENST00000477434 IGHV3-33P01772 117 aa2.54□□□□□ -2
PDZRN3-206ENST00000477434 SMR3BP02814 79 aaPredicted RBP2.54□□□□□ -2
PDZRN3-206ENST00000477434 ANGP03950 147 aaKnown RBP2.54□□□□□ -2
PDZRN3-206ENST00000477434 C3orf79P0CE67 100 aa2.54□□□□□ -2
PDZRN3-206ENST00000477434 IGHV3-30-3P0DP02 117 aa2.54□□□□□ -2
PDZRN3-206ENST00000477434 IGHV3-30-5P0DP03 117 aa2.54□□□□□ -2
PDZRN3-206ENST00000477434 UBE2D1P51668 147 aa2.54□□□□□ -2
PDZRN3-206ENST00000477434 REG3AQ06141 175 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms