RNA–Protein interactions for RNA: ENST00000476559.2

RPGR-207, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 1,047 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-207ENST00000476559 RGPD2P0DJD1 1756 aa0.7□□□□□ -2.3
RPGR-207ENST00000476559 CUX1P39880 1505 aa0.7□□□□□ -2.3
RPGR-207ENST00000476559 MAP3K1Q13233 1512 aa0.7□□□□□ -2.3
RPGR-207ENST00000476559 ABCC2Q92887 1545 aa0.7□□□□□ -2.3
RPGR-207ENST00000476559 A0A1B0GWA3 101 aa0.7□□□□□ -2.3
RPGR-207ENST00000476559 ZNF815PA8K554 130 aa0.7□□□□□ -2.3
RPGR-207ENST00000476559 ARMS2P0C7Q2 107 aa0.7□□□□□ -2.3
RPGR-207ENST00000476559 HAMPP81172 84 aa0.7□□□□□ -2.3
RPGR-207ENST00000476559 ETDBQ3ZM63 59 aa0.7□□□□□ -2.3
RPGR-207ENST00000476559 SSBP3-AS1Q7Z2R9 100 aa0.7□□□□□ -2.3
RPGR-207ENST00000476559 TMEM263Q8WUH6 116 aaKnown RBP0.7□□□□□ -2.3
RPGR-207ENST00000476559 LINC00846Q9NV44 126 aa0.7□□□□□ -2.3
RPGR-207ENST00000476559 ARFGEF2Q9Y6D5 1785 aa0.7□□□□□ -2.3
RPGR-207ENST00000476559 H3BQF6 201 aa0.69□□□□□ -2.3
RPGR-207ENST00000476559 BCE1O60756 84 aa0.69□□□□□ -2.3
RPGR-207ENST00000476559 FXYD6P3P58550 94 aa0.69□□□□□ -2.3
RPGR-207ENST00000476559 SPATA8Q6RVD6 105 aa0.69□□□□□ -2.3
RPGR-207ENST00000476559 DEFB107AQ8IZN7 70 aa0.69□□□□□ -2.3
RPGR-207ENST00000476559 LINC01600Q96MT4 127 aa0.69□□□□□ -2.3
RPGR-207ENST00000476559 ERCC6L2Q5T890 1561 aa0.69□□□□□ -2.3
RPGR-207ENST00000476559 A0A0G2JMZ2 1700 aa0.69□□□□□ -2.3
RPGR-207ENST00000476559 QSER1Q2KHR3 1735 aa0.69□□□□□ -2.3
RPGR-207ENST00000476559 TTC28Q96AY4 2481 aa0.69□□□□□ -2.3
RPGR-207ENST00000476559 DOPEY2Q9Y3R5 2298 aa0.68□□□□□ -2.3
RPGR-207ENST00000476559 IQGAP3Q86VI3 1631 aa0.68□□□□□ -2.3
RPGR-207ENST00000476559 RGPD8O14715 1765 aaPredicted RBP0.68□□□□□ -2.3
RPGR-207ENST00000476559 RGPD5Q99666 1765 aa0.68□□□□□ -2.3
RPGR-207ENST00000476559 I3L2K1 104 aa0.68□□□□□ -2.3
RPGR-207ENST00000476559 ABCA8O94911 1581 aa0.68□□□□□ -2.3
RPGR-207ENST00000476559 POLR1AO95602 1720 aaPredicted RBP0.68□□□□□ -2.3
RPGR-207ENST00000476559 WFDC2Q14508 124 aa0.68□□□□□ -2.3
RPGR-207ENST00000476559 PEA15Q15121 130 aa0.68□□□□□ -2.3
RPGR-207ENST00000476559 NMSQ5H8A3 153 aa0.68□□□□□ -2.3
RPGR-207ENST00000476559 KRTAP19-3Q7Z4W3 81 aa0.68□□□□□ -2.3
RPGR-207ENST00000476559 UBE2DNLQ8IWF7 75 aa0.68□□□□□ -2.3
RPGR-207ENST00000476559 CEP170BQ9Y4F5 1589 aaPredicted RBP0.68□□□□□ -2.3
RPGR-207ENST00000476559 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.68□□□□□ -2.3
RPGR-207ENST00000476559 SAMD9Q5K651 1589 aa0.67□□□□□ -2.3
RPGR-207ENST00000476559 CFAP74Q9C0B2 1584 aa0.67□□□□□ -2.3
RPGR-207ENST00000476559 C2CD3Q4AC94 2353 aa0.67□□□□□ -2.3
RPGR-207ENST00000476559 USF3Q68DE3 2245 aa0.67□□□□□ -2.3
RPGR-207ENST00000476559 PIN1P1O15428 100 aa0.67□□□□□ -2.3
RPGR-207ENST00000476559 POLQO75417 2590 aa0.67□□□□□ -2.3
RPGR-207ENST00000476559 MYO5CQ9NQX4 1742 aa0.67□□□□□ -2.3
RPGR-207ENST00000476559 LINC00959A0A1B0GUT2 108 aa0.66□□□□□ -2.3
RPGR-207ENST00000476559 HMGN2P05204 90 aaKnown RBP0.66□□□□□ -2.3
RPGR-207ENST00000476559 BIVM-ERCC5R4GMW8 1640 aa0.66□□□□□ -2.3
RPGR-207ENST00000476559 GOLGA4Q13439 2230 aaKnown RBP0.66□□□□□ -2.3
RPGR-207ENST00000476559 KIAA0556O60303 1618 aa0.65□□□□□ -2.31
RPGR-207ENST00000476559 DOT1LQ8TEK3 1739 aa0.65□□□□□ -2.31
RPGR-207ENST00000476559 FMN2Q9NZ56 1722 aa0.65□□□□□ -2.31
RPGR-207ENST00000476559 IQCF6A8MYZ5 107 aa0.65□□□□□ -2.31
RPGR-207ENST00000476559 ALKAL2Q6UX46 152 aa0.65□□□□□ -2.31
RPGR-207ENST00000476559 UBE2D4Q9Y2X8 147 aa0.65□□□□□ -2.31
RPGR-207ENST00000476559 SPCS1Q9Y6A9 102 aa0.65□□□□□ -2.31
RPGR-207ENST00000476559 F8P00451 2351 aa0.65□□□□□ -2.31
RPGR-207ENST00000476559 DNMBPQ6XZF7 1577 aa0.65□□□□□ -2.31
RPGR-207ENST00000476559 COL14A1Q05707 1796 aaKnown RBP0.65□□□□□ -2.31
RPGR-207ENST00000476559 RRBP1Q9P2E9 1410 aaKnown RBP0.64□□□□□ -2.31
RPGR-207ENST00000476559 PIK3C2BO00750 1634 aa0.64□□□□□ -2.31
RPGR-207ENST00000476559 USP32Q8NFA0 1604 aa0.64□□□□□ -2.31
RPGR-207ENST00000476559 TSC2P49815 1807 aa0.64□□□□□ -2.31
RPGR-207ENST00000476559 H0Y9P7 68 aa0.64□□□□□ -2.31
RPGR-207ENST00000476559 KRTAP2-3P0C7H8 128 aa0.64□□□□□ -2.31
RPGR-207ENST00000476559 ZNF720Q7Z2F6 126 aa0.64□□□□□ -2.31
RPGR-207ENST00000476559 KRTAP2-4Q9BYR9 128 aa0.64□□□□□ -2.31
RPGR-207ENST00000476559 KRTAP2-1Q9BYU5 128 aa0.64□□□□□ -2.31
RPGR-207ENST00000476559 ITSN1Q15811 1721 aa0.64□□□□□ -2.31
RPGR-207ENST00000476559 PARP4Q9UKK3 1724 aaKnown RBP0.64□□□□□ -2.31
RPGR-207ENST00000476559 PTPN23Q9H3S7 1636 aa0.64□□□□□ -2.31
RPGR-207ENST00000476559 ATP7BP35670 1465 aa0.63□□□□□ -2.31
RPGR-207ENST00000476559 TRBV6-1A0A0K0K1D8 114 aa0.63□□□□□ -2.31
RPGR-207ENST00000476559 BCORQ6W2J9 1755 aa0.62□□□□□ -2.31
RPGR-207ENST00000476559 CELSR2Q9HCU4 2923 aa0.62□□□□□ -2.31
RPGR-207ENST00000476559 CCDC88BA6NC98 1476 aa0.62□□□□□ -2.31
RPGR-207ENST00000476559 LRRC37AA6NMS7 1700 aa0.62□□□□□ -2.31
RPGR-207ENST00000476559 LEPROTL1O95214 131 aa0.62□□□□□ -2.31
RPGR-207ENST00000476559 HMGN3Q15651 99 aa0.62□□□□□ -2.31
RPGR-207ENST00000476559 C6orf201Q7Z4U5 140 aa0.62□□□□□ -2.31
RPGR-207ENST00000476559 ST20Q9HBF5 79 aa0.62□□□□□ -2.31
RPGR-207ENST00000476559 RABAC1Q9UI14 185 aa0.62□□□□□ -2.31
RPGR-207ENST00000476559 TIAM2Q8IVF5 1701 aa0.61□□□□□ -2.31
RPGR-207ENST00000476559 D6R8Y8 96 aa0.61□□□□□ -2.31
RPGR-207ENST00000476559 SNRPFP62306 86 aaKnown RBP0.61□□□□□ -2.31
RPGR-207ENST00000476559 MUSTN1Q8IVN3 82 aa0.61□□□□□ -2.31
RPGR-207ENST00000476559 BDP1A6H8Y1 2624 aa0.61□□□□□ -2.31
RPGR-207ENST00000476559 PTPRZ1P23471 2315 aaPredicted RBP0.6□□□□□ -2.31
RPGR-207ENST00000476559 CSMD3Q7Z407 3707 aa0.6□□□□□ -2.31
RPGR-207ENST00000476559 LRRC7Q96NW7 1537 aa0.6□□□□□ -2.31
RPGR-207ENST00000476559 PIEZO2Q9H5I5 2752 aa0.6□□□□□ -2.31
RPGR-207ENST00000476559 MYMXA0A1B0GTQ4 84 aa0.6□□□□□ -2.31
RPGR-207ENST00000476559 A0A1B0GU69 56 aa0.6□□□□□ -2.31
RPGR-207ENST00000476559 IGLC2P0DOY2 106 aa0.6□□□□□ -2.31
RPGR-207ENST00000476559 IGLC3P0DOY3 106 aa0.6□□□□□ -2.31
RPGR-207ENST00000476559 BVES-AS1Q5T3Y7 98 aa0.6□□□□□ -2.31
RPGR-207ENST00000476559 LINC00643Q86TS7 51 aa0.6□□□□□ -2.31
RPGR-207ENST00000476559 CNFNQ9BYD5 112 aa0.6□□□□□ -2.31
RPGR-207ENST00000476559 TP53AIP1Q9HCN2 124 aa0.6□□□□□ -2.31
RPGR-207ENST00000476559 CHD9Q3L8U1 2897 aa0.6□□□□□ -2.31
RPGR-207ENST00000476559 LRRC9Q6ZRR7 1453 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms