RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CXCL5P42830 114 aa18.91■□□□□ 0.62
HOXB3-208ENST00000476342 C10orf25Q5T742 122 aa18.91■□□□□ 0.62
HOXB3-208ENST00000476342 C2orf82Q6UX34 121 aa18.91■□□□□ 0.62
HOXB3-208ENST00000476342 SCXQ7RTU7 201 aa18.91■□□□□ 0.62
HOXB3-208ENST00000476342 COX7B2Q8TF08 81 aa18.91■□□□□ 0.62
HOXB3-208ENST00000476342 TRBV30A0A0K0K1B3 111 aa18.9■□□□□ 0.62
HOXB3-208ENST00000476342 CIRBPQ14011 172 aaKnown RBP18.9■□□□□ 0.62
HOXB3-208ENST00000476342 ODF1Q14990 250 aa18.9■□□□□ 0.62
HOXB3-208ENST00000476342 HERC2O95714 4834 aa18.89■□□□□ 0.61
HOXB3-208ENST00000476342 C6orf48Q9UBA6 75 aa18.89■□□□□ 0.61
HOXB3-208ENST00000476342 IGKV2-24A0A0C4DH68 120 aa18.88■□□□□ 0.61
HOXB3-208ENST00000476342 CHTF8P0CG12 524 aa18.88■□□□□ 0.61
HOXB3-208ENST00000476342 CIRBP-AS1Q8TBR5 109 aa18.88■□□□□ 0.61
HOXB3-208ENST00000476342 LINC00474Q9P2X8 69 aa18.88■□□□□ 0.61
HOXB3-208ENST00000476342 PANO1I0J062 215 aa18.87■□□□□ 0.61
HOXB3-208ENST00000476342 SPACA4Q8TDM5 124 aa18.87■□□□□ 0.61
HOXB3-208ENST00000476342 DPH3Q96FX2 82 aa18.87■□□□□ 0.61
HOXB3-208ENST00000476342 A0A096LNI7 61 aa18.86■□□□□ 0.61
HOXB3-208ENST00000476342 IGLV5-39A0A0G2JS06 123 aa18.85■□□□□ 0.61
HOXB3-208ENST00000476342 RPL18AQ02543 176 aaKnown RBP18.84■□□□□ 0.61
HOXB3-208ENST00000476342 MAJINQ3KP22 176 aa18.83■□□□□ 0.61
HOXB3-208ENST00000476342 PLNP26678 52 aa18.83■□□□□ 0.6
HOXB3-208ENST00000476342 PTTG1IPP53801 180 aa18.83■□□□□ 0.6
HOXB3-208ENST00000476342 GAGE2BQ13066 116 aa18.83■□□□□ 0.6
HOXB3-208ENST00000476342 TLX1NBP0CAT3 122 aa18.82■□□□□ 0.6
HOXB3-208ENST00000476342 TMEM223A0PJW6 202 aa18.81■□□□□ 0.6
HOXB3-208ENST00000476342 Q8N1X5 172 aa18.81■□□□□ 0.6
HOXB3-208ENST00000476342 SMR3BP02814 79 aaPredicted RBP18.8■□□□□ 0.6
HOXB3-208ENST00000476342 A0A087WYN8 130 aa18.79■□□□□ 0.6
HOXB3-208ENST00000476342 SYS1-DBNDD2H3BUS1 97 aa18.79■□□□□ 0.6
HOXB3-208ENST00000476342 DPM2O94777 84 aa18.79■□□□□ 0.6
HOXB3-208ENST00000476342 S100A6P06703 90 aa18.77■□□□□ 0.6
HOXB3-208ENST00000476342 IGKCP01834 107 aa18.76■□□□□ 0.59
HOXB3-208ENST00000476342 C9orf116Q5BN46 136 aaPredicted RBP18.76■□□□□ 0.59
HOXB3-208ENST00000476342 STPG4Q8N801 248 aa18.76■□□□□ 0.59
HOXB3-208ENST00000476342 PMCHL2Q9BQD1 86 aa18.76■□□□□ 0.59
HOXB3-208ENST00000476342 NDUFC2-KCTD14E9PQ53 114 aa18.75■□□□□ 0.59
HOXB3-208ENST00000476342 Q6ZRP5 223 aa18.75■□□□□ 0.59
HOXB3-208ENST00000476342 PET117Q6UWS5 81 aa18.74■□□□□ 0.59
HOXB3-208ENST00000476342 PLAC8Q9NZF1 115 aa18.74■□□□□ 0.59
HOXB3-208ENST00000476342 SFTA2Q6UW10 78 aa18.74■□□□□ 0.59
HOXB3-208ENST00000476342 FAM229AH3BQW9 127 aa18.72■□□□□ 0.59
HOXB3-208ENST00000476342 C3orf79P0CE67 100 aa18.72■□□□□ 0.59
HOXB3-208ENST00000476342 GAGE2EQ4V326 116 aa18.72■□□□□ 0.59
HOXB3-208ENST00000476342 GAGE2DQ9UEU5 116 aa18.72■□□□□ 0.59
HOXB3-208ENST00000476342 LINC00528Q8N1L1 170 aa18.71■□□□□ 0.59
HOXB3-208ENST00000476342 EPM2AB3EWF7 344 aa18.7■□□□□ 0.58
HOXB3-208ENST00000476342 S100A2P29034 98 aa18.7■□□□□ 0.58
HOXB3-208ENST00000476342 KRTDAPP60985 99 aa18.7■□□□□ 0.58
HOXB3-208ENST00000476342 LINC01545Q5VT33 79 aa18.7■□□□□ 0.58
HOXB3-208ENST00000476342 HERVK_113P61574 105 aa18.69■□□□□ 0.58
HOXB3-208ENST00000476342 KRTAP17-1Q9BYP8 105 aa18.69■□□□□ 0.58
HOXB3-208ENST00000476342 FAT1Q14517 4588 aa18.69■□□□□ 0.58
HOXB3-208ENST00000476342 Q5VSD8 79 aa18.68■□□□□ 0.58
HOXB3-208ENST00000476342 HIST3H2BBQ8N257 126 aa18.68■□□□□ 0.58
HOXB3-208ENST00000476342 ZNF625Q96I27 306 aaPredicted RBP18.65■□□□□ 0.58
HOXB3-208ENST00000476342 C20orf202A1L168 122 aa18.64■□□□□ 0.57
HOXB3-208ENST00000476342 LEPROTO15243 131 aa18.63■□□□□ 0.57
HOXB3-208ENST00000476342 PLEKHB2Q96CS7 222 aa18.63■□□□□ 0.57
HOXB3-208ENST00000476342 HIST1H2BLQ99880 126 aa18.62■□□□□ 0.57
HOXB3-208ENST00000476342 A0A1W2PNN7 141 aa18.61■□□□□ 0.57
HOXB3-208ENST00000476342 PLA2G1BP04054 148 aaKnown RBP18.61■□□□□ 0.57
HOXB3-208ENST00000476342 ERG28Q9UKR5 140 aa18.61■□□□□ 0.57
HOXB3-208ENST00000476342 SNRPEP62304 92 aaKnown RBP18.6■□□□□ 0.57
HOXB3-208ENST00000476342 C7orf33Q8WU49 177 aa18.6■□□□□ 0.57
HOXB3-208ENST00000476342 COX17Q14061 63 aa18.59■□□□□ 0.57
HOXB3-208ENST00000476342 C9orf129Q5T035 196 aaKnown RBP18.59■□□□□ 0.57
HOXB3-208ENST00000476342 PFN2P35080 140 aa18.58■□□□□ 0.57
HOXB3-208ENST00000476342 NDUFA12Q9UI09 145 aa18.58■□□□□ 0.57
HOXB3-208ENST00000476342 KRTAP4-5Q9BYR2 181 aa18.57■□□□□ 0.56
HOXB3-208ENST00000476342 XAGE1AQ9HD64 81 aa18.57■□□□□ 0.56
HOXB3-208ENST00000476342 J3QQQ9 107 aa18.57■□□□□ 0.56
HOXB3-208ENST00000476342 AKR1D1P51857 326 aa18.57■□□□□ 0.56
HOXB3-208ENST00000476342 HERV-K104P63124 156 aa18.57■□□□□ 0.56
HOXB3-208ENST00000476342 MYMXA0A1B0GTQ4 84 aa18.56■□□□□ 0.56
HOXB3-208ENST00000476342 FAM168BA1KXE4 195 aa18.55■□□□□ 0.56
HOXB3-208ENST00000476342 E9PLD3 99 aa18.55■□□□□ 0.56
HOXB3-208ENST00000476342 LGALS3P17931 250 aaKnown RBP18.55■□□□□ 0.56
HOXB3-208ENST00000476342 TSPEAR-AS2P59090 65 aa18.55■□□□□ 0.56
HOXB3-208ENST00000476342 FAM19A5Q7Z5A7 132 aaPredicted RBP18.55■□□□□ 0.56
HOXB3-208ENST00000476342 C5orf52A6NGY3 159 aa18.54■□□□□ 0.56
HOXB3-208ENST00000476342 RPL37AP61513 92 aaKnown RBP18.54■□□□□ 0.56
HOXB3-208ENST00000476342 NMUP48645 174 aa18.53■□□□□ 0.56
HOXB3-208ENST00000476342 VPS13BQ7Z7G8 4022 aa18.52■□□□□ 0.56
HOXB3-208ENST00000476342 MEIG1Q5JSS6 88 aa18.51■□□□□ 0.55
HOXB3-208ENST00000476342 LINC00587B1AMM8 73 aa18.5■□□□□ 0.55
HOXB3-208ENST00000476342 LINC00158P58513 81 aa18.49■□□□□ 0.55
HOXB3-208ENST00000476342 M0QXV9 152 aa18.48■□□□□ 0.55
HOXB3-208ENST00000476342 PHF5AQ7RTV0 110 aaKnown RBP18.48■□□□□ 0.55
HOXB3-208ENST00000476342 KRTAP7-1Q8IUC3 87 aa18.46■□□□□ 0.55
HOXB3-208ENST00000476342 SRRM2Q9UQ35 2752 aaKnown RBP18.46■□□□□ 0.55
HOXB3-208ENST00000476342 A0A0U1RRA0 63 aa18.45■□□□□ 0.54
HOXB3-208ENST00000476342 SND1-IT1Q9HBX3 110 aa18.45■□□□□ 0.54
HOXB3-208ENST00000476342 SMIM13P0DJ93 91 aa18.44■□□□□ 0.54
HOXB3-208ENST00000476342 SERTAD4-AS1Q5TG53 156 aa18.44■□□□□ 0.54
HOXB3-208ENST00000476342 ATOH7Q8N100 152 aa18.44■□□□□ 0.54
HOXB3-208ENST00000476342 PLA2G2DQ9UNK4 145 aa18.44■□□□□ 0.54
HOXB3-208ENST00000476342 KRTAP10-4P60372 401 aaPredicted RBP18.43■□□□□ 0.54
HOXB3-208ENST00000476342 ABCA13Q86UQ4 5058 aa18.43■□□□□ 0.54
HOXB3-208ENST00000476342 C22orf24Q9Y442 160 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms