RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 KLK12Q9UKR0 248 aa4.77□□□□□ -1.65
SHQ1-207ENST00000475558 LINC00588Q9Y4M8 146 aa4.77□□□□□ -1.65
SHQ1-207ENST00000475558 IGHV3OR16-9A0A0B4J2B5 98 aa4.76□□□□□ -1.65
SHQ1-207ENST00000475558 hDV102S1A0JD36 115 aa4.76□□□□□ -1.65
SHQ1-207ENST00000475558 COX7A2LO14548 114 aa4.76□□□□□ -1.65
SHQ1-207ENST00000475558 ZNF22P17026 224 aaPredicted RBP4.76□□□□□ -1.65
SHQ1-207ENST00000475558 MALP21145 153 aa4.76□□□□□ -1.65
SHQ1-207ENST00000475558 HERV-K104P63124 156 aa4.76□□□□□ -1.65
SHQ1-207ENST00000475558 MAJINQ3KP22 176 aa4.76□□□□□ -1.65
SHQ1-207ENST00000475558 ATOH7Q8N100 152 aa4.76□□□□□ -1.65
SHQ1-207ENST00000475558 COPS9Q8WXC6 57 aa4.76□□□□□ -1.65
SHQ1-207ENST00000475558 MYMXA0A1B0GTQ4 84 aa4.75□□□□□ -1.65
SHQ1-207ENST00000475558 J3QQQ9 107 aa4.75□□□□□ -1.65
SHQ1-207ENST00000475558 CXCL5P42830 114 aa4.75□□□□□ -1.65
SHQ1-207ENST00000475558 Q6ZVH6 145 aa4.75□□□□□ -1.65
SHQ1-207ENST00000475558 CHCHD10Q8WYQ3 142 aaPredicted RBP4.75□□□□□ -1.65
SHQ1-207ENST00000475558 UBE2WQ96B02 151 aa4.75□□□□□ -1.65
SHQ1-207ENST00000475558 C1orf43Q9BWL3 253 aa4.75□□□□□ -1.65
SHQ1-207ENST00000475558 HIGD1BQ9P298 99 aa4.75□□□□□ -1.65
SHQ1-207ENST00000475558 CDKN2A-AS1Q9UH64 79 aa4.75□□□□□ -1.65
SHQ1-207ENST00000475558 IGLV5-39A0A0G2JS06 123 aa4.74□□□□□ -1.65
SHQ1-207ENST00000475558 H3BS24 57 aa4.74□□□□□ -1.65
SHQ1-207ENST00000475558 IGHV3-30P01768 117 aa4.74□□□□□ -1.65
SHQ1-207ENST00000475558 IGHV3-33P01772 117 aa4.74□□□□□ -1.65
SHQ1-207ENST00000475558 PRSS2P07478 247 aa4.74□□□□□ -1.65
SHQ1-207ENST00000475558 IGHV3-30-3P0DP02 117 aa4.74□□□□□ -1.65
SHQ1-207ENST00000475558 IGHV3-30-5P0DP03 117 aa4.74□□□□□ -1.65
SHQ1-207ENST00000475558 TAL2Q16559 108 aa4.74□□□□□ -1.65
SHQ1-207ENST00000475558 RNASE13Q5GAN3 156 aaKnown RBP4.74□□□□□ -1.65
SHQ1-207ENST00000475558 C6orf226Q5I0X4 101 aa4.74□□□□□ -1.65
SHQ1-207ENST00000475558 ENHOQ6UWT2 76 aa4.74□□□□□ -1.65
SHQ1-207ENST00000475558 WFDC10BQ8IUB3 73 aa4.74□□□□□ -1.65
SHQ1-207ENST00000475558 NACAE9PAV3 2078 aa4.73□□□□□ -1.65
SHQ1-207ENST00000475558 IGKV3OR2-268A0A0C4DH90 116 aa4.73□□□□□ -1.65
SHQ1-207ENST00000475558 RTL8CO15255 209 aa4.73□□□□□ -1.65
SHQ1-207ENST00000475558 DDTP30046 118 aa4.73□□□□□ -1.65
SHQ1-207ENST00000475558 XCL1P47992 114 aa4.73□□□□□ -1.65
SHQ1-207ENST00000475558 COX6A2Q02221 97 aa4.73□□□□□ -1.65
SHQ1-207ENST00000475558 SCGB1D4Q6XE38 83 aa4.73□□□□□ -1.65
SHQ1-207ENST00000475558 C14orf144Q96I85 54 aa4.73□□□□□ -1.65
SHQ1-207ENST00000475558 PKD1P98161 4303 aa4.73□□□□□ -1.65
SHQ1-207ENST00000475558 HSPG2P98160 4391 aa4.72□□□□□ -1.65
SHQ1-207ENST00000475558 IGHV3-64A0A075B6Q5 118 aa4.72□□□□□ -1.65
SHQ1-207ENST00000475558 A0A0J9YXY3 114 aa4.72□□□□□ -1.65
SHQ1-207ENST00000475558 GAGE12HA6NDE8 117 aa4.72□□□□□ -1.65
SHQ1-207ENST00000475558 ZNF815PA8K554 130 aa4.72□□□□□ -1.65
SHQ1-207ENST00000475558 TIMM17BO60830 172 aa4.72□□□□□ -1.65
SHQ1-207ENST00000475558 HNRNPA3P51991 378 aaKnown RBP4.72□□□□□ -1.65
SHQ1-207ENST00000475558 COX17Q14061 63 aa4.72□□□□□ -1.65
SHQ1-207ENST00000475558 Q8IZM0 81 aa4.72□□□□□ -1.65
SHQ1-207ENST00000475558 NDUFA12Q9UI09 145 aa4.72□□□□□ -1.65
SHQ1-207ENST00000475558 SMIM1B2RUZ4 78 aa4.71□□□□□ -1.66
SHQ1-207ENST00000475558 M0R143 59 aa4.71□□□□□ -1.66
SHQ1-207ENST00000475558 M0R2N4 97 aa4.71□□□□□ -1.66
SHQ1-207ENST00000475558 NDUFA1O15239 70 aa4.71□□□□□ -1.66
SHQ1-207ENST00000475558 CKS1BP61024 79 aa4.71□□□□□ -1.66
SHQ1-207ENST00000475558 FOXI1Q12951 378 aa4.71□□□□□ -1.66
SHQ1-207ENST00000475558 SRSF9Q13242 221 aaKnown RBP eCLIP4.71□□□□□ -1.66
SHQ1-207ENST00000475558 C14orf177Q52M58 125 aa4.71□□□□□ -1.66
SHQ1-207ENST00000475558 LBHQ53QV2 105 aaPredicted RBP4.71□□□□□ -1.66
SHQ1-207ENST00000475558 C5orf38Q86SI9 138 aa4.71□□□□□ -1.66
SHQ1-207ENST00000475558 COX7B2Q8TF08 81 aa4.71□□□□□ -1.66
SHQ1-207ENST00000475558 PRO1933Q9H354 126 aa4.71□□□□□ -1.66
SHQ1-207ENST00000475558 PPDPFQ9H3Y8 114 aa4.71□□□□□ -1.66
SHQ1-207ENST00000475558 IGKV2D-24A0A075B6R9 120 aa4.7□□□□□ -1.66
SHQ1-207ENST00000475558 TMEM238C9JI98 176 aa4.7□□□□□ -1.66
SHQ1-207ENST00000475558 ZNF561-AS1K7EIQ3 104 aa4.7□□□□□ -1.66
SHQ1-207ENST00000475558 SPINK8P0C7L1 97 aa4.7□□□□□ -1.66
SHQ1-207ENST00000475558 IFITM1P13164 125 aa4.7□□□□□ -1.66
SHQ1-207ENST00000475558 CTAG1AP78358 180 aa4.7□□□□□ -1.66
SHQ1-207ENST00000475558 PCP2Q8IVA1 136 aa4.7□□□□□ -1.66
SHQ1-207ENST00000475558 C2orf48Q96LS8 159 aa4.7□□□□□ -1.66
SHQ1-207ENST00000475558 PKIGQ9Y2B9 76 aa4.7□□□□□ -1.66
SHQ1-207ENST00000475558 IGLV10-54A0A075B6I4 117 aa4.69□□□□□ -1.66
SHQ1-207ENST00000475558 IGKV2D-26A0A0A0MRZ7 120 aa4.69□□□□□ -1.66
SHQ1-207ENST00000475558 NBDYA0A0U1RRE5 68 aa4.69□□□□□ -1.66
SHQ1-207ENST00000475558 PTTG1IPP53801 180 aa4.69□□□□□ -1.66
SHQ1-207ENST00000475558 HSD52Q0P140 79 aa4.69□□□□□ -1.66
SHQ1-207ENST00000475558 SPANXB1Q9NS25 103 aaPredicted RBP4.69□□□□□ -1.66
SHQ1-207ENST00000475558 TP73-AS1Q9UF72 201 aa4.69□□□□□ -1.66
SHQ1-207ENST00000475558 GVQW2A0A096LPI5 108 aaPredicted RBP4.68□□□□□ -1.66
SHQ1-207ENST00000475558 PCP4L1A6NKN8 68 aa4.68□□□□□ -1.66
SHQ1-207ENST00000475558 CDK2AP2O75956 126 aa4.68□□□□□ -1.66
SHQ1-207ENST00000475558 RNF151Q2KHN1 245 aa4.68□□□□□ -1.66
SHQ1-207ENST00000475558 MEIG1Q5JSS6 88 aa4.68□□□□□ -1.66
SHQ1-207ENST00000475558 CLPSL2Q6UWE3 100 aa4.68□□□□□ -1.66
SHQ1-207ENST00000475558 Q6ZR54 194 aa4.68□□□□□ -1.66
SHQ1-207ENST00000475558 MAPKAPK5-AS1Q8N8E1 139 aa4.68□□□□□ -1.66
SHQ1-207ENST00000475558 ORAOV1Q8WV07 137 aa4.68□□□□□ -1.66
SHQ1-207ENST00000475558 ZNF625Q96I27 306 aaPredicted RBP4.68□□□□□ -1.66
SHQ1-207ENST00000475558 HIST1H4GQ99525 98 aa4.68□□□□□ -1.66
SHQ1-207ENST00000475558 TOMM7Q9P0U1 55 aa4.68□□□□□ -1.66
SHQ1-207ENST00000475558 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.67□□□□□ -1.66
SHQ1-207ENST00000475558 TRBV30A0A0K0K1B3 111 aa4.67□□□□□ -1.66
SHQ1-207ENST00000475558 PSCAO43653 123 aa4.67□□□□□ -1.66
SHQ1-207ENST00000475558 RPL24P83731 157 aaKnown RBP4.67□□□□□ -1.66
SHQ1-207ENST00000475558 KIAA0087Q14695 138 aa4.67□□□□□ -1.66
SHQ1-207ENST00000475558 C1orf134Q5TEV5 83 aa4.67□□□□□ -1.66
SHQ1-207ENST00000475558 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
SHQ1-207ENST00000475558 KRTAP26-1Q6PEX3 210 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms