RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 SRRM2Q9UQ35 2752 aaKnown RBP4.79□□□□□ -1.64
LSAMP-204ENST00000475403 IGKV3D-20A0A0C4DH25 116 aa4.79□□□□□ -1.64
LSAMP-204ENST00000475403 IGIPA6NJ69 53 aa4.79□□□□□ -1.64
LSAMP-204ENST00000475403 GIG44P09565 113 aaPredicted RBP4.79□□□□□ -1.64
LSAMP-204ENST00000475403 TSPEAR-AS2P59090 65 aa4.79□□□□□ -1.64
LSAMP-204ENST00000475403 KRTAP10-2P60368 255 aa4.79□□□□□ -1.64
LSAMP-204ENST00000475403 RPL18AQ02543 176 aaKnown RBP4.79□□□□□ -1.64
LSAMP-204ENST00000475403 Q5XG85 94 aa4.79□□□□□ -1.64
LSAMP-204ENST00000475403 DCANP1Q8TF63 244 aa4.79□□□□□ -1.64
LSAMP-204ENST00000475403 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
LSAMP-204ENST00000475403 A0A0J9YXY3 114 aa4.78□□□□□ -1.64
LSAMP-204ENST00000475403 KNCNA6PVL3 124 aa4.78□□□□□ -1.64
LSAMP-204ENST00000475403 TIMM17BO60830 172 aa4.78□□□□□ -1.64
LSAMP-204ENST00000475403 NXPH4O95158 308 aa4.78□□□□□ -1.64
LSAMP-204ENST00000475403 ZNF415Q09FC8 603 aa4.78□□□□□ -1.64
LSAMP-204ENST00000475403 KLK9Q2XQG4 91 aa4.78□□□□□ -1.64
LSAMP-204ENST00000475403 SPANXN1Q5VSR9 72 aa4.78□□□□□ -1.64
LSAMP-204ENST00000475403 Q6ZSN1 163 aa4.78□□□□□ -1.64
LSAMP-204ENST00000475403 SERP2Q8N6R1 65 aa4.78□□□□□ -1.64
LSAMP-204ENST00000475403 UPK3BQ9BT76 320 aa4.78□□□□□ -1.64
LSAMP-204ENST00000475403 KLK9Q9UKQ9 250 aa4.78□□□□□ -1.64
LSAMP-204ENST00000475403 IGHV3OR16-12A0A075B7B8 117 aa4.77□□□□□ -1.65
LSAMP-204ENST00000475403 IGHV3-66A0A0C4DH42 116 aa4.77□□□□□ -1.65
LSAMP-204ENST00000475403 FAM229AH3BQW9 127 aa4.77□□□□□ -1.65
LSAMP-204ENST00000475403 NDUFC2O95298 119 aa4.77□□□□□ -1.65
LSAMP-204ENST00000475403 TSHBP01222 138 aa4.77□□□□□ -1.65
LSAMP-204ENST00000475403 ZNF22P17026 224 aaPredicted RBP4.77□□□□□ -1.65
LSAMP-204ENST00000475403 CCL18P55774 89 aa4.77□□□□□ -1.65
LSAMP-204ENST00000475403 RHOHQ15669 191 aa4.77□□□□□ -1.65
LSAMP-204ENST00000475403 SERTAD4-AS1Q5TG53 156 aa4.77□□□□□ -1.65
LSAMP-204ENST00000475403 Q6JHZ5 121 aa4.77□□□□□ -1.65
LSAMP-204ENST00000475403 C9orf47Q6ZRZ4 202 aa4.77□□□□□ -1.65
LSAMP-204ENST00000475403 MUSTN1Q8IVN3 82 aa4.77□□□□□ -1.65
LSAMP-204ENST00000475403 Q8TAT8 98 aa4.77□□□□□ -1.65
LSAMP-204ENST00000475403 ZFAND3Q9H8U3 227 aa4.77□□□□□ -1.65
LSAMP-204ENST00000475403 XCL2Q9UBD3 114 aa4.77□□□□□ -1.65
LSAMP-204ENST00000475403 TRBV6-5A0A0K0K1A5 114 aa4.76□□□□□ -1.65
LSAMP-204ENST00000475403 DAD1P61803 113 aa4.76□□□□□ -1.65
LSAMP-204ENST00000475403 MIAQ16674 131 aa4.76□□□□□ -1.65
LSAMP-204ENST00000475403 C14orf178Q8N769 122 aaPredicted RBP4.76□□□□□ -1.65
LSAMP-204ENST00000475403 CSNK1G2-AS1Q8NCQ2 148 aa4.76□□□□□ -1.65
LSAMP-204ENST00000475403 SMCR5Q8TEV8 140 aa4.76□□□□□ -1.65
LSAMP-204ENST00000475403 LITAFQ99732 161 aa4.76□□□□□ -1.65
LSAMP-204ENST00000475403 TIMM21Q9BVV7 248 aa4.76□□□□□ -1.65
LSAMP-204ENST00000475403 FAT1Q14517 4588 aa4.75□□□□□ -1.65
LSAMP-204ENST00000475403 TRAV13-1A0A0B4J241 112 aa4.75□□□□□ -1.65
LSAMP-204ENST00000475403 TRAV26-2A0A0B4J265 109 aa4.75□□□□□ -1.65
LSAMP-204ENST00000475403 BCE1O60756 84 aa4.75□□□□□ -1.65
LSAMP-204ENST00000475403 SMR3BP02814 79 aaPredicted RBP4.75□□□□□ -1.65
LSAMP-204ENST00000475403 POLR2KP53803 58 aaKnown RBP4.75□□□□□ -1.65
LSAMP-204ENST00000475403 COPS9Q8WXC6 57 aa4.75□□□□□ -1.65
LSAMP-204ENST00000475403 JPT2Q9H910 190 aa4.75□□□□□ -1.65
LSAMP-204ENST00000475403 PLA2G2DQ9UNK4 145 aa4.75□□□□□ -1.65
LSAMP-204ENST00000475403 TRBV27A0A0K0K1C4 114 aa4.74□□□□□ -1.65
LSAMP-204ENST00000475403 hADV29S1A0JD25 119 aa4.74□□□□□ -1.65
LSAMP-204ENST00000475403 COX7A2LO14548 114 aa4.74□□□□□ -1.65
LSAMP-204ENST00000475403 VCYO14598 125 aa4.74□□□□□ -1.65
LSAMP-204ENST00000475403 BUB3O43684 328 aa4.74□□□□□ -1.65
LSAMP-204ENST00000475403 OXTP01178 125 aa4.74□□□□□ -1.65
LSAMP-204ENST00000475403 CTSGP08311 255 aa4.74□□□□□ -1.65
LSAMP-204ENST00000475403 SNRPD3P62318 126 aaKnown RBP4.74□□□□□ -1.65
LSAMP-204ENST00000475403 C11orf21Q9P2W6 132 aa4.74□□□□□ -1.65
LSAMP-204ENST00000475403 PYGO1Q9Y3Y4 419 aa4.74□□□□□ -1.65
LSAMP-204ENST00000475403 VPS13BQ7Z7G8 4022 aa4.74□□□□□ -1.65
LSAMP-204ENST00000475403 TRAV12-2A0A075B6T6 113 aa4.73□□□□□ -1.65
LSAMP-204ENST00000475403 I3L3M4 83 aa4.73□□□□□ -1.65
LSAMP-204ENST00000475403 K7EQG2 157 aa4.73□□□□□ -1.65
LSAMP-204ENST00000475403 MRPS36P82909 103 aaKnown RBP4.73□□□□□ -1.65
LSAMP-204ENST00000475403 ATP5EP2Q5VTU8 51 aa4.73□□□□□ -1.65
LSAMP-204ENST00000475403 Q9H8V8 135 aa4.73□□□□□ -1.65
LSAMP-204ENST00000475403 SERP1Q9Y6X1 66 aa4.73□□□□□ -1.65
LSAMP-204ENST00000475403 TRAV21A0A0B4J279 112 aa4.72□□□□□ -1.65
LSAMP-204ENST00000475403 H7C2G1 150 aa4.72□□□□□ -1.65
LSAMP-204ENST00000475403 RNASE4P34096 147 aaKnown RBP4.72□□□□□ -1.65
LSAMP-204ENST00000475403 FUSP35637 526 aaKnown RBP eCLIP4.72□□□□□ -1.65
LSAMP-204ENST00000475403 NPC2P61916 151 aa4.72□□□□□ -1.65
LSAMP-204ENST00000475403 HRCT1Q6UXD1 115 aa4.72□□□□□ -1.65
LSAMP-204ENST00000475403 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.72□□□□□ -1.65
LSAMP-204ENST00000475403 RNF182Q8N6D2 247 aa4.72□□□□□ -1.65
LSAMP-204ENST00000475403 RPL39LQ96EH5 51 aaKnown RBP4.72□□□□□ -1.65
LSAMP-204ENST00000475403 FAM19A4Q96LR4 140 aa4.72□□□□□ -1.65
LSAMP-204ENST00000475403 C9orf85Q96MD7 179 aa4.72□□□□□ -1.65
LSAMP-204ENST00000475403 LINC00588Q9Y4M8 146 aa4.72□□□□□ -1.65
LSAMP-204ENST00000475403 HMCN2Q8NDA2 5059 aa4.71□□□□□ -1.66
LSAMP-204ENST00000475403 IGHV1-58A0A0C4DH39 117 aa4.71□□□□□ -1.66
LSAMP-204ENST00000475403 TINCRA0A1B0GVN0 87 aa4.71□□□□□ -1.66
LSAMP-204ENST00000475403 IGKV3-20P01619 116 aa4.71□□□□□ -1.66
LSAMP-204ENST00000475403 PFN2P35080 140 aa4.71□□□□□ -1.66
LSAMP-204ENST00000475403 ATP5EP56381 51 aaPredicted RBP4.71□□□□□ -1.66
LSAMP-204ENST00000475403 C4orf26Q17RF5 130 aa4.71□□□□□ -1.66
LSAMP-204ENST00000475403 S100A7L2Q5SY68 101 aa4.71□□□□□ -1.66
LSAMP-204ENST00000475403 VSIG2Q96IQ7 327 aa4.71□□□□□ -1.66
LSAMP-204ENST00000475403 KIF25-AS1Q9Y6Z4 181 aa4.71□□□□□ -1.66
LSAMP-204ENST00000475403 TRAV8-3A0A0A6YYJ7 113 aa4.7□□□□□ -1.66
LSAMP-204ENST00000475403 FAM236DA0A1B0GTK5 79 aa4.7□□□□□ -1.66
LSAMP-204ENST00000475403 KRTAP29-1A8MX34 341 aaPredicted RBP4.7□□□□□ -1.66
LSAMP-204ENST00000475403 RS1O15537 224 aa4.7□□□□□ -1.66
LSAMP-204ENST00000475403 FAM236CP0DP71 79 aa4.7□□□□□ -1.66
LSAMP-204ENST00000475403 DEFB130BP0DP73 79 aa4.7□□□□□ -1.66
LSAMP-204ENST00000475403 DEFB130AP0DP74 79 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms