RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 A0A1B0GXF2 115 aa11.9□□□□□ -0.5
VPS36-203ENST00000475375 GAGE10A6NGK3 116 aa11.9□□□□□ -0.5
VPS36-203ENST00000475375 F8VRH5 84 aa11.9□□□□□ -0.5
VPS36-203ENST00000475375 UBE2AP49459 152 aa11.9□□□□□ -0.5
VPS36-203ENST00000475375 LINC00167Q96N53 147 aa11.9□□□□□ -0.5
VPS36-203ENST00000475375 CYSLTR1Q9Y271 337 aa11.9□□□□□ -0.5
VPS36-203ENST00000475375 TPRXLQ17RH7 258 aa11.89□□□□□ -0.51
VPS36-203ENST00000475375 LINC00173Q6ZV60 143 aa11.89□□□□□ -0.51
VPS36-203ENST00000475375 MUC17Q685J3 4493 aa11.88□□□□□ -0.51
VPS36-203ENST00000475375 C2orf66Q6UXQ4 117 aa11.88□□□□□ -0.51
VPS36-203ENST00000475375 AMELXQ99217 191 aa11.87□□□□□ -0.51
VPS36-203ENST00000475375 IGKV2D-26A0A0A0MRZ7 120 aa11.86□□□□□ -0.51
VPS36-203ENST00000475375 MAP1LC3AQ9H492 121 aa11.86□□□□□ -0.51
VPS36-203ENST00000475375 FAM229BQ4G0N7 80 aa11.85□□□□□ -0.51
VPS36-203ENST00000475375 AKAP14Q86UN6 197 aa11.85□□□□□ -0.51
VPS36-203ENST00000475375 GEMIN7Q9H840 131 aaKnown RBP11.85□□□□□ -0.51
VPS36-203ENST00000475375 CDKN2A-AS1Q9UH64 79 aa11.85□□□□□ -0.51
VPS36-203ENST00000475375 HERVK_113P63121 156 aa11.84□□□□□ -0.51
VPS36-203ENST00000475375 C9JQL5 133 aa11.83□□□□□ -0.52
VPS36-203ENST00000475375 CXCL5P42830 114 aa11.83□□□□□ -0.52
VPS36-203ENST00000475375 SEC11AP67812 179 aa11.83□□□□□ -0.52
VPS36-203ENST00000475375 NKAPP1Q8N9T2 125 aa11.83□□□□□ -0.52
VPS36-203ENST00000475375 ATP5L2Q7Z4Y8 100 aa11.82□□□□□ -0.52
VPS36-203ENST00000475375 Q8N8P6 123 aa11.82□□□□□ -0.52
VPS36-203ENST00000475375 LAMTOR2Q9Y2Q5 125 aa11.82□□□□□ -0.52
VPS36-203ENST00000475375 PRSS47A8MTI9 375 aa11.81□□□□□ -0.52
VPS36-203ENST00000475375 PNRC1Q12796 327 aaPredicted RBP11.81□□□□□ -0.52
VPS36-203ENST00000475375 ORMDL2Q53FV1 153 aa11.81□□□□□ -0.52
VPS36-203ENST00000475375 FAM19A3Q7Z5A8 133 aa11.81□□□□□ -0.52
VPS36-203ENST00000475375 KRTAP13-1Q8IUC0 172 aa11.81□□□□□ -0.52
VPS36-203ENST00000475375 IGIPA6NJ69 53 aa11.8□□□□□ -0.52
VPS36-203ENST00000475375 NPSP0C0P6 89 aa11.8□□□□□ -0.52
VPS36-203ENST00000475375 RAB5BP61020 215 aa11.79□□□□□ -0.52
VPS36-203ENST00000475375 PAPPA-AS1Q5QFB9 102 aa11.79□□□□□ -0.52
VPS36-203ENST00000475375 PPDPFQ9H3Y8 114 aa11.79□□□□□ -0.52
VPS36-203ENST00000475375 IGKV2-28A0A075B6P5 120 aa11.78□□□□□ -0.52
VPS36-203ENST00000475375 IGKV2D-28P01615 120 aa11.78□□□□□ -0.52
VPS36-203ENST00000475375 PEA15Q15121 130 aa11.78□□□□□ -0.52
VPS36-203ENST00000475375 SRSF3P84103 164 aaKnown RBP11.77□□□□□ -0.53
VPS36-203ENST00000475375 COX7B2Q8TF08 81 aa11.77□□□□□ -0.53
VPS36-203ENST00000475375 IGLV5-37A0A075B6J1 123 aa11.76□□□□□ -0.53
VPS36-203ENST00000475375 PRLHP81277 87 aa11.76□□□□□ -0.53
VPS36-203ENST00000475375 SMIM1B2RUZ4 78 aa11.75□□□□□ -0.53
VPS36-203ENST00000475375 SCO1O75880 301 aa11.75□□□□□ -0.53
VPS36-203ENST00000475375 hCG_2014768A0A024R1R8 64 aa11.74□□□□□ -0.53
VPS36-203ENST00000475375 CTAG1AP78358 180 aa11.74□□□□□ -0.53
VPS36-203ENST00000475375 FAM19A1Q7Z5A9 133 aa11.74□□□□□ -0.53
VPS36-203ENST00000475375 K7EMI3 77 aa11.73□□□□□ -0.53
VPS36-203ENST00000475375 PDZD11Q5EBL8 140 aa11.73□□□□□ -0.53
VPS36-203ENST00000475375 LINC01547P58512 204 aaPredicted RBP11.72□□□□□ -0.53
VPS36-203ENST00000475375 NXT2Q9NPJ8 142 aaKnown RBP11.72□□□□□ -0.53
VPS36-203ENST00000475375 G0S2P27469 103 aa11.71□□□□□ -0.53
VPS36-203ENST00000475375 C3orf22Q8N5N4 141 aa11.71□□□□□ -0.53
VPS36-203ENST00000475375 LINC00337Q8N6G1 96 aa11.71□□□□□ -0.53
VPS36-203ENST00000475375 TIMM17AQ99595 171 aa11.71□□□□□ -0.53
VPS36-203ENST00000475375 TOMM6Q96B49 74 aa11.69□□□□□ -0.54
VPS36-203ENST00000475375 TMEM126AQ9H061 195 aa11.69□□□□□ -0.54
VPS36-203ENST00000475375 TMEM238C9JI98 176 aa11.68□□□□□ -0.54
VPS36-203ENST00000475375 SPINK8P0C7L1 97 aa11.68□□□□□ -0.54
VPS36-203ENST00000475375 SCGB3A1Q96QR1 104 aa11.68□□□□□ -0.54
VPS36-203ENST00000475375 TINCRA0A1B0GVN0 87 aa11.67□□□□□ -0.54
VPS36-203ENST00000475375 ATP5LO75964 103 aa11.67□□□□□ -0.54
VPS36-203ENST00000475375 PFN2P35080 140 aa11.66□□□□□ -0.54
VPS36-203ENST00000475375 SPAG11AQ6PDA7 123 aa11.66□□□□□ -0.54
VPS36-203ENST00000475375 FP248Q71RG6 208 aaPredicted RBP11.66□□□□□ -0.54
VPS36-203ENST00000475375 PLEKHB2Q96CS7 222 aa11.66□□□□□ -0.54
VPS36-203ENST00000475375 C4orf48Q5BLP8 95 aa11.65□□□□□ -0.54
VPS36-203ENST00000475375 ERASQ7Z444 233 aa11.65□□□□□ -0.54
VPS36-203ENST00000475375 CBLN2Q8IUK8 224 aa11.65□□□□□ -0.54
VPS36-203ENST00000475375 IGLV5-45A0A087WSX0 123 aa11.64□□□□□ -0.55
VPS36-203ENST00000475375 LCE2DQ5TA82 110 aaPredicted RBP11.64□□□□□ -0.55
VPS36-203ENST00000475375 HIGD2AQ9BW72 106 aa11.64□□□□□ -0.55
VPS36-203ENST00000475375 M0R378 163 aa11.62□□□□□ -0.55
VPS36-203ENST00000475375 VPREB1P12018 145 aa11.62□□□□□ -0.55
VPS36-203ENST00000475375 ADCYAP1P18509 176 aa11.62□□□□□ -0.55
VPS36-203ENST00000475375 ASB16-AS1Q495Z4 193 aa11.62□□□□□ -0.55
VPS36-203ENST00000475375 FSIP2Q5CZC0 6907 aa11.62□□□□□ -0.55
VPS36-203ENST00000475375 KRTAP13-3Q3SY46 172 aa11.61□□□□□ -0.55
VPS36-203ENST00000475375 GNB1LQ9BYB4 327 aa11.61□□□□□ -0.55
VPS36-203ENST00000475375 MT-ND4LP03901 98 aa11.6□□□□□ -0.55
VPS36-203ENST00000475375 RPL24P83731 157 aaKnown RBP11.6□□□□□ -0.55
VPS36-203ENST00000475375 CST9LQ9H4G1 147 aa11.6□□□□□ -0.55
VPS36-203ENST00000475375 SND1-IT1Q9HBX3 110 aa11.6□□□□□ -0.55
VPS36-203ENST00000475375 CRCT1Q9UGL9 99 aa11.6□□□□□ -0.55
VPS36-203ENST00000475375 H3BRM9 83 aa11.59□□□□□ -0.55
VPS36-203ENST00000475375 RAB14P61106 215 aa11.59□□□□□ -0.55
VPS36-203ENST00000475375 MRPL18Q9H0U6 180 aaKnown RBP11.59□□□□□ -0.55
VPS36-203ENST00000475375 KIAA1644Q3SXP7 199 aa11.58□□□□□ -0.56
VPS36-203ENST00000475375 ANAPC16Q96DE5 110 aa11.58□□□□□ -0.56
VPS36-203ENST00000475375 SEC61BP60468 96 aaKnown RBP11.57□□□□□ -0.56
VPS36-203ENST00000475375 DAND5Q8N907 189 aa11.56□□□□□ -0.56
VPS36-203ENST00000475375 Q8NBF4 154 aa11.56□□□□□ -0.56
VPS36-203ENST00000475375 SPRR4Q96PI1 79 aa11.56□□□□□ -0.56
VPS36-203ENST00000475375 KRTAP4-1Q9BYQ7 146 aa11.56□□□□□ -0.56
VPS36-203ENST00000475375 ERG28Q9UKR5 140 aa11.56□□□□□ -0.56
VPS36-203ENST00000475375 PMVKQ15126 192 aa11.55□□□□□ -0.56
VPS36-203ENST00000475375 ZNF706Q9Y5V0 76 aaPredicted RBP11.55□□□□□ -0.56
VPS36-203ENST00000475375 LINC01549A6NIU2 74 aa11.53□□□□□ -0.56
VPS36-203ENST00000475375 ZNF625Q96I27 306 aaPredicted RBP11.53□□□□□ -0.56
VPS36-203ENST00000475375 Q8NDZ9 215 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms