RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 IGHV4-38-2P0DP08 117 aa3.39□□□□□ -1.87
NPHP3-206ENST00000474871 TSPEAR-AS2P59090 65 aa3.39□□□□□ -1.87
NPHP3-206ENST00000474871 Q8TAT8 98 aa3.39□□□□□ -1.87
NPHP3-206ENST00000474871 LITAFQ99732 161 aa3.39□□□□□ -1.87
NPHP3-206ENST00000474871 MRPL36Q9P0J6 103 aaKnown RBP3.39□□□□□ -1.87
NPHP3-206ENST00000474871 PRRC2CQ9Y520 2896 aaKnown RBP3.39□□□□□ -1.87
NPHP3-206ENST00000474871 H3BRN7 92 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 P0C880 135 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 ZFP36P26651 326 aaKnown RBP3.38□□□□□ -1.87
NPHP3-206ENST00000474871 C2orf82Q6UX34 121 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 LINC00846Q9NV44 126 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 ETDCA0A1B0GVM5 59 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 H3BQ85 93 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 CTSGP08311 255 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 LINC00242Q5T6M2 205 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 LINC00269Q8N2A0 174 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 DSCAML1Q8TD84 2053 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 SDHAF1A6NFY7 115 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 TMEM61Q8N0U2 210 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 NOP10Q9NPE3 64 aaKnown RBP3.38□□□□□ -1.87
NPHP3-206ENST00000474871 RELNP78509 3460 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 TRAV7A0A075B6U4 112 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 C8orf49Q96NF6 230 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 CAMK2N2Q96S95 79 aa3.38□□□□□ -1.87
NPHP3-206ENST00000474871 ITPR1Q14643 2758 aa3.37□□□□□ -1.87
NPHP3-206ENST00000474871 D6R8Y8 96 aa3.37□□□□□ -1.87
NPHP3-206ENST00000474871 KLK9Q9UKQ9 250 aa3.37□□□□□ -1.87
NPHP3-206ENST00000474871 FASNP49327 2511 aaKnown RBP3.37□□□□□ -1.87
NPHP3-206ENST00000474871 IGHV4-31P0DP07 118 aa3.37□□□□□ -1.87
NPHP3-206ENST00000474871 PRAC1Q96KF2 57 aa3.37□□□□□ -1.87
NPHP3-206ENST00000474871 PRO0255Q9UI72 69 aa3.37□□□□□ -1.87
NPHP3-206ENST00000474871 ZZEF1O43149 2961 aa3.37□□□□□ -1.87
NPHP3-206ENST00000474871 IGF2RP11717 2491 aa3.37□□□□□ -1.87
NPHP3-206ENST00000474871 LY6G6DO95868 133 aa3.37□□□□□ -1.87
NPHP3-206ENST00000474871 SLURP1P55000 103 aa3.37□□□□□ -1.87
NPHP3-206ENST00000474871 C5orf56Q8N8D9 126 aa3.37□□□□□ -1.87
NPHP3-206ENST00000474871 IGHV7-81A0A0B4J1V7 117 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 NDUFA1O15239 70 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 PROP1O75360 226 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 NDUFB1O75438 58 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 C7orf33Q8WU49 177 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 FAM104AQ969W3 186 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 PLAC8Q9NZF1 115 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 IGHV3-16A0A0C4DH30 117 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 A6NDX4 124 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 GAS8-AS1O95177 125 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 NBEAQ8NFP9 2946 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 TRAV10A0A0B4J240 114 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 UBE2AP49459 152 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 DEFB135Q30KP9 77 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 C2orf66Q6UXQ4 117 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 Q6YL49 198 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 SNURFQ9Y675 71 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 WT1-ASQ06250 92 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 DEFB136Q30KP8 78 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 C11orf21Q9P2W6 132 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 ZNF580Q9UK33 172 aa3.36□□□□□ -1.87
NPHP3-206ENST00000474871 TRBV10-1A0A0K0K1A3 114 aa3.35□□□□□ -1.87
NPHP3-206ENST00000474871 Q8N9W7 124 aa3.35□□□□□ -1.87
NPHP3-206ENST00000474871 SND1-IT1Q9HBX3 110 aa3.35□□□□□ -1.87
NPHP3-206ENST00000474871 IGHV4OR15-8A0A075B7B6 117 aa3.35□□□□□ -1.87
NPHP3-206ENST00000474871 A0A087WW49 117 aa3.35□□□□□ -1.87
NPHP3-206ENST00000474871 TRAV12-1A0A0B4J245 112 aa3.35□□□□□ -1.87
NPHP3-206ENST00000474871 LCE6AA0A183 80 aa3.35□□□□□ -1.87
NPHP3-206ENST00000474871 KIF25-AS1Q9Y6Z4 181 aa3.35□□□□□ -1.87
NPHP3-206ENST00000474871 MTORP42345 2549 aa3.35□□□□□ -1.87
NPHP3-206ENST00000474871 NDUFC1O43677 76 aa3.35□□□□□ -1.87
NPHP3-206ENST00000474871 CEP295Q9C0D2 2601 aa3.35□□□□□ -1.87
NPHP3-206ENST00000474871 IGLV11-55A0A075B6I3 123 aa3.34□□□□□ -1.87
NPHP3-206ENST00000474871 IGHV3-64A0A075B6Q5 118 aa3.34□□□□□ -1.87
NPHP3-206ENST00000474871 FSHBP01225 129 aa3.34□□□□□ -1.87
NPHP3-206ENST00000474871 PRM2P04554 102 aa3.34□□□□□ -1.87
NPHP3-206ENST00000474871 IGFL4Q6B9Z1 124 aa3.34□□□□□ -1.87
NPHP3-206ENST00000474871 C11orf71Q6IPW1 123 aa3.34□□□□□ -1.87
NPHP3-206ENST00000474871 NDUFA12Q9UI09 145 aa3.34□□□□□ -1.87
NPHP3-206ENST00000474871 IGKV3D-7A0A0C4DH55 119 aa3.34□□□□□ -1.87
NPHP3-206ENST00000474871 DEFB131BA0A096LNP1 70 aa3.34□□□□□ -1.87
NPHP3-206ENST00000474871 IGLV1-47P01700 117 aa3.34□□□□□ -1.87
NPHP3-206ENST00000474871 IGLV2-23P01705 113 aa3.34□□□□□ -1.87
NPHP3-206ENST00000474871 SUMO4Q6EEV6 95 aa3.34□□□□□ -1.87
NPHP3-206ENST00000474871 B9D2Q9BPU9 175 aa3.34□□□□□ -1.87
NPHP3-206ENST00000474871 CDC42SE2Q9NRR3 84 aa3.34□□□□□ -1.87
NPHP3-206ENST00000474871 FN1P02751 2386 aaKnown RBP3.34□□□□□ -1.88
NPHP3-206ENST00000474871 A0A096LPF7 62 aa3.34□□□□□ -1.88
NPHP3-206ENST00000474871 TRBV10-3A0A0K0K1G6 114 aa3.34□□□□□ -1.88
NPHP3-206ENST00000474871 NUPR2A6NF83 97 aa3.34□□□□□ -1.88
NPHP3-206ENST00000474871 UBL5Q9BZL1 73 aa3.34□□□□□ -1.88
NPHP3-206ENST00000474871 ADGRG4Q8IZF6 3080 aa3.34□□□□□ -1.88
NPHP3-206ENST00000474871 IGLV4-69A0A075B6H9 119 aa3.33□□□□□ -1.88
NPHP3-206ENST00000474871 FAM167A-AS1Q96KT0 104 aa3.33□□□□□ -1.88
NPHP3-206ENST00000474871 A0A087X002 238 aa3.33□□□□□ -1.88
NPHP3-206ENST00000474871 HCG22E2RYF7 251 aa3.33□□□□□ -1.88
NPHP3-206ENST00000474871 C20orf203Q8NBC4 194 aa3.33□□□□□ -1.88
NPHP3-206ENST00000474871 TLN1Q9Y490 2541 aaKnown RBP3.33□□□□□ -1.88
NPHP3-206ENST00000474871 ERC2-IT1O76042 136 aa3.33□□□□□ -1.88
NPHP3-206ENST00000474871 MRPL51Q4U2R6 128 aaKnown RBP3.33□□□□□ -1.88
NPHP3-206ENST00000474871 Q8N6K4 173 aa3.33□□□□□ -1.88
NPHP3-206ENST00000474871 HRNRQ86YZ3 2850 aaPredicted RBP3.33□□□□□ -1.88
NPHP3-206ENST00000474871 LRCOL1A6NCL2 159 aa3.32□□□□□ -1.88
NPHP3-206ENST00000474871 RTL8CO15255 209 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms