RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 APOMO95445 188 aa8.56□□□□□ -1.04
CCDC78-209ENST00000474647 G0S2P27469 103 aa8.56□□□□□ -1.04
CCDC78-209ENST00000474647 RNASE13Q5GAN3 156 aaKnown RBP8.56□□□□□ -1.04
CCDC78-209ENST00000474647 PHF5AQ7RTV0 110 aaKnown RBP8.56□□□□□ -1.04
CCDC78-209ENST00000474647 TOMM6Q96B49 74 aa8.56□□□□□ -1.04
CCDC78-209ENST00000474647 TIMM21Q9BVV7 248 aa8.56□□□□□ -1.04
CCDC78-209ENST00000474647 SPANXA1Q9NS26 97 aa8.56□□□□□ -1.04
CCDC78-209ENST00000474647 CSDC2Q9Y534 153 aaKnown RBP8.56□□□□□ -1.04
CCDC78-209ENST00000474647 LINC01549A6NIU2 74 aa8.55□□□□□ -1.04
CCDC78-209ENST00000474647 NUPR1O60356 82 aa8.55□□□□□ -1.04
CCDC78-209ENST00000474647 PYY3Q5JQD4 70 aa8.55□□□□□ -1.04
CCDC78-209ENST00000474647 PYGO1Q9Y3Y4 419 aa8.55□□□□□ -1.04
CCDC78-209ENST00000474647 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.54□□□□□ -1.04
CCDC78-209ENST00000474647 HSBP1O75506 76 aa8.54□□□□□ -1.04
CCDC78-209ENST00000474647 HBDP02042 147 aa8.54□□□□□ -1.04
CCDC78-209ENST00000474647 PRR26Q8N8Z3 221 aa8.54□□□□□ -1.04
CCDC78-209ENST00000474647 PACRGQ96M98 296 aaPredicted RBP8.54□□□□□ -1.04
CCDC78-209ENST00000474647 OPRPNQ99935 248 aaPredicted RBP8.54□□□□□ -1.04
CCDC78-209ENST00000474647 TRAV13-1A0A0B4J241 112 aa8.53□□□□□ -1.04
CCDC78-209ENST00000474647 NPSP0C0P6 89 aa8.53□□□□□ -1.04
CCDC78-209ENST00000474647 PMCHL1Q16048 86 aa8.53□□□□□ -1.04
CCDC78-209ENST00000474647 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
CCDC78-209ENST00000474647 IGIPA6NJ69 53 aa8.52□□□□□ -1.05
CCDC78-209ENST00000474647 MRPS36P82909 103 aaKnown RBP8.52□□□□□ -1.05
CCDC78-209ENST00000474647 SPAG11BQ08648 103 aa8.52□□□□□ -1.05
CCDC78-209ENST00000474647 Q6ZUT4 128 aa8.52□□□□□ -1.05
CCDC78-209ENST00000474647 C5orf38Q86SI9 138 aa8.52□□□□□ -1.05
CCDC78-209ENST00000474647 DIRC1Q969H9 104 aa8.52□□□□□ -1.05
CCDC78-209ENST00000474647 FAM104AQ969W3 186 aa8.52□□□□□ -1.05
CCDC78-209ENST00000474647 IGLV4-3A0A075B6K6 122 aa8.51□□□□□ -1.05
CCDC78-209ENST00000474647 ERASQ7Z444 233 aa8.51□□□□□ -1.05
CCDC78-209ENST00000474647 FAM19A2Q8N3H0 131 aa8.51□□□□□ -1.05
CCDC78-209ENST00000474647 C2orf48Q96LS8 159 aa8.51□□□□□ -1.05
CCDC78-209ENST00000474647 IGLV7-43P04211 117 aa8.5□□□□□ -1.05
CCDC78-209ENST00000474647 TMEM141Q96I45 108 aa8.5□□□□□ -1.05
CCDC78-209ENST00000474647 SCGB3A1Q96QR1 104 aa8.5□□□□□ -1.05
CCDC78-209ENST00000474647 A0A087WZ39 114 aa8.49□□□□□ -1.05
CCDC78-209ENST00000474647 JOSD1Q15040 202 aaPredicted RBP8.49□□□□□ -1.05
CCDC78-209ENST00000474647 FAM168BA1KXE4 195 aa8.48□□□□□ -1.05
CCDC78-209ENST00000474647 H0Y9J4 135 aa8.48□□□□□ -1.05
CCDC78-209ENST00000474647 ATP5LO75964 103 aa8.48□□□□□ -1.05
CCDC78-209ENST00000474647 S100A12P80511 92 aa8.48□□□□□ -1.05
CCDC78-209ENST00000474647 PAPPA-AS1Q5QFB9 102 aa8.48□□□□□ -1.05
CCDC78-209ENST00000474647 Q6ZN92 141 aa8.48□□□□□ -1.05
CCDC78-209ENST00000474647 FAM19A5Q7Z5A7 132 aaPredicted RBP8.48□□□□□ -1.05
CCDC78-209ENST00000474647 ORAOV1Q8WV07 137 aa8.48□□□□□ -1.05
CCDC78-209ENST00000474647 AMELXQ99217 191 aa8.48□□□□□ -1.05
CCDC78-209ENST00000474647 TEX43Q6ZNM6 134 aa8.47□□□□□ -1.05
CCDC78-209ENST00000474647 LINC00173Q6ZV60 143 aa8.47□□□□□ -1.05
CCDC78-209ENST00000474647 LEPROTL1O95214 131 aa8.46□□□□□ -1.06
CCDC78-209ENST00000474647 UBE2D1P51668 147 aa8.46□□□□□ -1.06
CCDC78-209ENST00000474647 PRR4Q16378 134 aa8.46□□□□□ -1.06
CCDC78-209ENST00000474647 RNF151Q2KHN1 245 aa8.46□□□□□ -1.06
CCDC78-209ENST00000474647 KRTAP11-1Q8IUC1 163 aa8.46□□□□□ -1.06
CCDC78-209ENST00000474647 MUC2Q02817 5179 aa8.46□□□□□ -1.06
CCDC78-209ENST00000474647 NDUFA1O15239 70 aa8.45□□□□□ -1.06
CCDC78-209ENST00000474647 IFI27L1Q96BM0 104 aa8.45□□□□□ -1.06
CCDC78-209ENST00000474647 C2orf88Q9BSF0 95 aa8.45□□□□□ -1.06
CCDC78-209ENST00000474647 VCX2Q9H322 139 aa8.45□□□□□ -1.06
CCDC78-209ENST00000474647 MRPL35Q9NZE8 188 aaKnown RBP8.45□□□□□ -1.06
CCDC78-209ENST00000474647 IGLV1-50A0A075B6I6 118 aa8.44□□□□□ -1.06
CCDC78-209ENST00000474647 UBE2BP63146 152 aa8.44□□□□□ -1.06
CCDC78-209ENST00000474647 GAGE2EQ4V326 116 aa8.44□□□□□ -1.06
CCDC78-209ENST00000474647 ZC2HC1BQ5TFG8 222 aa8.44□□□□□ -1.06
CCDC78-209ENST00000474647 GAGE2DQ9UEU5 116 aa8.44□□□□□ -1.06
CCDC78-209ENST00000474647 HSPB8Q9UJY1 196 aa8.44□□□□□ -1.06
CCDC78-209ENST00000474647 PMVKQ15126 192 aa8.43□□□□□ -1.06
CCDC78-209ENST00000474647 C10orf25Q5T742 122 aa8.43□□□□□ -1.06
CCDC78-209ENST00000474647 FAM19A3Q7Z5A8 133 aa8.43□□□□□ -1.06
CCDC78-209ENST00000474647 LINC00587B1AMM8 73 aa8.42□□□□□ -1.06
CCDC78-209ENST00000474647 M0QXV9 152 aa8.42□□□□□ -1.06
CCDC78-209ENST00000474647 KRTAP1-4P0C5Y4 121 aa8.42□□□□□ -1.06
CCDC78-209ENST00000474647 UNQ6190/PRO20217Q6UXQ8 127 aa8.42□□□□□ -1.06
CCDC78-209ENST00000474647 CST9LQ9H4G1 147 aa8.42□□□□□ -1.06
CCDC78-209ENST00000474647 C6orf48Q9UBA6 75 aa8.42□□□□□ -1.06
CCDC78-209ENST00000474647 TRAV12-1A0A0B4J245 112 aa8.41□□□□□ -1.06
CCDC78-209ENST00000474647 F8WDY8 70 aa8.41□□□□□ -1.06
CCDC78-209ENST00000474647 SCGB1D1O95968 90 aa8.41□□□□□ -1.06
CCDC78-209ENST00000474647 TLX1NBP0CAT3 122 aa8.4□□□□□ -1.06
CCDC78-209ENST00000474647 LINC00242Q5T6M2 205 aa8.4□□□□□ -1.06
CCDC78-209ENST00000474647 PRO1933Q9H354 126 aa8.4□□□□□ -1.06
CCDC78-209ENST00000474647 IGHV3OR16-9A0A0B4J2B5 98 aa8.39□□□□□ -1.07
CCDC78-209ENST00000474647 A0A0U1RQV1 116 aa8.39□□□□□ -1.07
CCDC78-209ENST00000474647 RPL13AP40429 203 aaKnown RBP8.39□□□□□ -1.07
CCDC78-209ENST00000474647 MAP1LC3CQ9BXW4 147 aa8.39□□□□□ -1.07
CCDC78-209ENST00000474647 TINCRA0A1B0GVN0 87 aa8.38□□□□□ -1.07
CCDC78-209ENST00000474647 IGLC3P0DOY3 106 aa8.38□□□□□ -1.07
CCDC78-209ENST00000474647 HERVK_113P63121 156 aa8.38□□□□□ -1.07
CCDC78-209ENST00000474647 SEC11AP67812 179 aa8.38□□□□□ -1.07
CCDC78-209ENST00000474647 KRTAP7-1Q8IUC3 87 aa8.38□□□□□ -1.07
CCDC78-209ENST00000474647 CHTOPQ9Y3Y2 248 aaKnown RBP8.38□□□□□ -1.07
CCDC78-209ENST00000474647 H0Y8G0 127 aa8.37□□□□□ -1.07
CCDC78-209ENST00000474647 SYS1-DBNDD2H3BUS1 97 aa8.37□□□□□ -1.07
CCDC78-209ENST00000474647 KRTDAPP60985 99 aa8.37□□□□□ -1.07
CCDC78-209ENST00000474647 F8VRH5 84 aa8.36□□□□□ -1.07
CCDC78-209ENST00000474647 C3orf79P0CE67 100 aa8.36□□□□□ -1.07
CCDC78-209ENST00000474647 KRTAP9-2Q9BYQ4 174 aa8.36□□□□□ -1.07
CCDC78-209ENST00000474647 GEMIN7Q9H840 131 aaKnown RBP8.36□□□□□ -1.07
CCDC78-209ENST00000474647 IGLV5-45A0A087WSX0 123 aa8.35□□□□□ -1.07
CCDC78-209ENST00000474647 TSPAN13O95857 204 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms