RNA–Protein interactions for RNA: ENST00000474311.1

NEPRO-215, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 1,671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-215ENST00000474311 ZNF831Q5JPB2 1677 aa3.34□□□□□ -1.88
NEPRO-215ENST00000474311 F5P12259 2224 aa3.34□□□□□ -1.88
NEPRO-215ENST00000474311 PKD1L3Q7Z443 1732 aa3.34□□□□□ -1.88
NEPRO-215ENST00000474311 C10orf113Q5VZT2 155 aa3.33□□□□□ -1.88
NEPRO-215ENST00000474311 FXYD6-FXYD2A0A087WZ82 144 aa3.33□□□□□ -1.88
NEPRO-215ENST00000474311 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.33□□□□□ -1.88
NEPRO-215ENST00000474311 COL4A4P53420 1690 aaPredicted RBP3.33□□□□□ -1.88
NEPRO-215ENST00000474311 LRP6O75581 1613 aa3.32□□□□□ -1.88
NEPRO-215ENST00000474311 KIF1AQ12756 1690 aa3.32□□□□□ -1.88
NEPRO-215ENST00000474311 ASCC3Q8N3C0 2202 aaKnown RBP3.32□□□□□ -1.88
NEPRO-215ENST00000474311 GNG13Q9P2W3 67 aa3.32□□□□□ -1.88
NEPRO-215ENST00000474311 MAP2P11137 1827 aaKnown RBP3.31□□□□□ -1.88
NEPRO-215ENST00000474311 A0A096LNT2 108 aa3.31□□□□□ -1.88
NEPRO-215ENST00000474311 IFI6P09912 130 aa3.31□□□□□ -1.88
NEPRO-215ENST00000474311 Q6ZRX8 168 aa3.3□□□□□ -1.88
NEPRO-215ENST00000474311 PLCH1Q4KWH8 1693 aa3.3□□□□□ -1.88
NEPRO-215ENST00000474311 XRN1Q8IZH2 1706 aaKnown RBP3.3□□□□□ -1.88
NEPRO-215ENST00000474311 G3V318 75 aa3.3□□□□□ -1.88
NEPRO-215ENST00000474311 SMIM5Q71RC9 77 aa3.3□□□□□ -1.88
NEPRO-215ENST00000474311 PREX1Q8TCU6 1659 aa3.29□□□□□ -1.88
NEPRO-215ENST00000474311 DIP2AQ14689 1571 aa3.29□□□□□ -1.88
NEPRO-215ENST00000474311 GVQW2A0A096LPI5 108 aaPredicted RBP3.29□□□□□ -1.88
NEPRO-215ENST00000474311 NCR3O14931 201 aa3.29□□□□□ -1.88
NEPRO-215ENST00000474311 HMGA1P17096 107 aaKnown RBP3.29□□□□□ -1.88
NEPRO-215ENST00000474311 KRTAP12-2P59991 146 aa3.29□□□□□ -1.88
NEPRO-215ENST00000474311 PLAC4Q8WY50 150 aa3.29□□□□□ -1.88
NEPRO-215ENST00000474311 PAPPAQ13219 1627 aa3.28□□□□□ -1.88
NEPRO-215ENST00000474311 LY6G6CO95867 125 aa3.28□□□□□ -1.88
NEPRO-215ENST00000474311 SMIM11BQ8TCY0 68 aa3.28□□□□□ -1.88
NEPRO-215ENST00000474311 UBR3Q6ZT12 1888 aa3.27□□□□□ -1.89
NEPRO-215ENST00000474311 PAPPA2Q9BXP8 1791 aa3.27□□□□□ -1.89
NEPRO-215ENST00000474311 SSC5DA1L4H1 1573 aa3.27□□□□□ -1.89
NEPRO-215ENST00000474311 WIZO95785 1651 aa3.26□□□□□ -1.89
NEPRO-215ENST00000474311 SAMD9Q5K651 1589 aa3.26□□□□□ -1.89
NEPRO-215ENST00000474311 ATXN8Q156A1 80 aa3.26□□□□□ -1.89
NEPRO-215ENST00000474311 LRRC37A2A6NM11 1700 aa3.26□□□□□ -1.89
NEPRO-215ENST00000474311 ABCA6Q8N139 1617 aa3.25□□□□□ -1.89
NEPRO-215ENST00000474311 CACNA1CQ13936 2221 aa3.25□□□□□ -1.89
NEPRO-215ENST00000474311 TIAM2Q8IVF5 1701 aa3.25□□□□□ -1.89
NEPRO-215ENST00000474311 LINC00575Q6W349 94 aa3.25□□□□□ -1.89
NEPRO-215ENST00000474311 CACNA1BQ00975 2339 aa3.25□□□□□ -1.89
NEPRO-215ENST00000474311 TRAV21A0A0B4J279 112 aa3.24□□□□□ -1.89
NEPRO-215ENST00000474311 KRTAP12-1P59990 96 aa3.24□□□□□ -1.89
NEPRO-215ENST00000474311 RALGAPBQ86X10 1494 aa3.24□□□□□ -1.89
NEPRO-215ENST00000474311 USP32Q8NFA0 1604 aa3.24□□□□□ -1.89
NEPRO-215ENST00000474311 PRB1P04280 392 aa3.24□□□□□ -1.89
NEPRO-215ENST00000474311 PARP4Q9UKK3 1724 aaKnown RBP3.24□□□□□ -1.89
NEPRO-215ENST00000474311 HAMPP81172 84 aa3.23□□□□□ -1.89
NEPRO-215ENST00000474311 KRTAP13-3Q3SY46 172 aa3.22□□□□□ -1.89
NEPRO-215ENST00000474311 FAM103A1Q9BTL3 118 aaKnown RBP3.22□□□□□ -1.89
NEPRO-215ENST00000474311 PRXQ9BXM0 1461 aa3.22□□□□□ -1.89
NEPRO-215ENST00000474311 KMT2BQ9UMN6 2715 aaPredicted RBP3.21□□□□□ -1.9
NEPRO-215ENST00000474311 GLI2P10070 1586 aa3.21□□□□□ -1.9
NEPRO-215ENST00000474311 CADP27708 2225 aa3.21□□□□□ -1.9
NEPRO-215ENST00000474311 ITSN2Q9NZM3 1697 aa3.21□□□□□ -1.9
NEPRO-215ENST00000474311 NDUFB1O75438 58 aa3.2□□□□□ -1.9
NEPRO-215ENST00000474311 NHSQ6T4R5 1651 aa3.2□□□□□ -1.9
NEPRO-215ENST00000474311 CICQ96RK0 1608 aaPredicted RBP3.2□□□□□ -1.9
NEPRO-215ENST00000474311 TRBV6-1A0A0K0K1D8 114 aa3.2□□□□□ -1.9
NEPRO-215ENST00000474311 SPINK13Q1W4C9 94 aa3.2□□□□□ -1.9
NEPRO-215ENST00000474311 LRRC7Q96NW7 1537 aa3.19□□□□□ -1.9
NEPRO-215ENST00000474311 A0A1B0GU69 56 aa3.19□□□□□ -1.9
NEPRO-215ENST00000474311 KRTAP10-10P60014 251 aa3.19□□□□□ -1.9
NEPRO-215ENST00000474311 RPL37P61927 97 aaKnown RBP3.19□□□□□ -1.9
NEPRO-215ENST00000474311 NREPQ16612 68 aa3.19□□□□□ -1.9
NEPRO-215ENST00000474311 DEFB112Q30KQ8 113 aa3.19□□□□□ -1.9
NEPRO-215ENST00000474311 WFDC9Q8NEX5 89 aa3.19□□□□□ -1.9
NEPRO-215ENST00000474311 NESP48681 1621 aa3.19□□□□□ -1.9
NEPRO-215ENST00000474311 COL14A1Q05707 1796 aaKnown RBP3.18□□□□□ -1.9
NEPRO-215ENST00000474311 BCORQ6W2J9 1755 aa3.18□□□□□ -1.9
NEPRO-215ENST00000474311 ANKRD17O75179 2603 aaKnown RBP3.18□□□□□ -1.9
NEPRO-215ENST00000474311 RNF17Q9BXT8 1623 aaKnown RBP3.18□□□□□ -1.9
NEPRO-215ENST00000474311 LINC00959A0A1B0GUT2 108 aa3.17□□□□□ -1.9
NEPRO-215ENST00000474311 GAFA1Q96PS6 74 aa3.16□□□□□ -1.9
NEPRO-215ENST00000474311 ALS2Q96Q42 1657 aa3.16□□□□□ -1.9
NEPRO-215ENST00000474311 ANKRD50Q9ULJ7 1429 aa3.15□□□□□ -1.9
NEPRO-215ENST00000474311 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.9
NEPRO-215ENST00000474311 ZDBF2Q9HCK1 2354 aa3.15□□□□□ -1.91
NEPRO-215ENST00000474311 CFAP43Q8NDM7 1665 aa3.15□□□□□ -1.91
NEPRO-215ENST00000474311 KIAA0556O60303 1618 aa3.14□□□□□ -1.91
NEPRO-215ENST00000474311 TECTAO75443 2155 aa3.14□□□□□ -1.91
NEPRO-215ENST00000474311 ASXL3Q9C0F0 2248 aa3.14□□□□□ -1.91
NEPRO-215ENST00000474311 SSBP3-AS1Q7Z2R9 100 aa3.14□□□□□ -1.91
NEPRO-215ENST00000474311 EIF2AK4Q9P2K8 1649 aaKnown RBP3.14□□□□□ -1.91
NEPRO-215ENST00000474311 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
NEPRO-215ENST00000474311 TSC2P49815 1807 aa3.12□□□□□ -1.91
NEPRO-215ENST00000474311 LINC01549A6NIU2 74 aa3.12□□□□□ -1.91
NEPRO-215ENST00000474311 FMN2Q9NZ56 1722 aa3.12□□□□□ -1.91
NEPRO-215ENST00000474311 LCE6AA0A183 80 aa3.11□□□□□ -1.91
NEPRO-215ENST00000474311 KRTAP10-5P60370 271 aa3.11□□□□□ -1.91
NEPRO-215ENST00000474311 SLIT1O75093 1534 aa3.11□□□□□ -1.91
NEPRO-215ENST00000474311 PIN1P1O15428 100 aa3.11□□□□□ -1.91
NEPRO-215ENST00000474311 RICTORQ6R327 1708 aa3.11□□□□□ -1.91
NEPRO-215ENST00000474311 CLASP1Q7Z460 1538 aa3.11□□□□□ -1.91
NEPRO-215ENST00000474311 FLG2Q5D862 2391 aaPredicted RBP3.1□□□□□ -1.91
NEPRO-215ENST00000474311 MROH2AA6NES4 1674 aa3.09□□□□□ -1.91
NEPRO-215ENST00000474311 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
NEPRO-215ENST00000474311 KNTC1P50748 2209 aa3.09□□□□□ -1.92
NEPRO-215ENST00000474311 POLR1AO95602 1720 aaPredicted RBP3.08□□□□□ -1.92
NEPRO-215ENST00000474311 PLXNB2O15031 1838 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms