RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 S100A6P06703 90 aa6.65□□□□□ -1.34
CASC3-204ENST00000474190 TSPEAR-AS2P59090 65 aa6.65□□□□□ -1.34
CASC3-204ENST00000474190 C2orf82Q6UX34 121 aa6.65□□□□□ -1.34
CASC3-204ENST00000474190 UNQ6190/PRO20217Q6UXQ8 127 aa6.65□□□□□ -1.34
CASC3-204ENST00000474190 Q6ZSA8 131 aa6.65□□□□□ -1.34
CASC3-204ENST00000474190 C6orf48Q9UBA6 75 aa6.65□□□□□ -1.34
CASC3-204ENST00000474190 KRTDAPP60985 99 aa6.64□□□□□ -1.35
CASC3-204ENST00000474190 Q8IZM0 81 aa6.64□□□□□ -1.35
CASC3-204ENST00000474190 TMA7Q9Y2S6 64 aaKnown RBP6.64□□□□□ -1.35
CASC3-204ENST00000474190 VPS13BQ7Z7G8 4022 aa6.64□□□□□ -1.35
CASC3-204ENST00000474190 DPM2O94777 84 aa6.63□□□□□ -1.35
CASC3-204ENST00000474190 APOMO95445 188 aa6.63□□□□□ -1.35
CASC3-204ENST00000474190 IGKCP01834 107 aa6.63□□□□□ -1.35
CASC3-204ENST00000474190 TMEM170BQ5T4T1 132 aa6.63□□□□□ -1.35
CASC3-204ENST00000474190 ZNF625Q96I27 306 aaPredicted RBP6.63□□□□□ -1.35
CASC3-204ENST00000474190 C16orf90A8MZG2 172 aa6.62□□□□□ -1.35
CASC3-204ENST00000474190 EREGO14944 169 aa6.62□□□□□ -1.35
CASC3-204ENST00000474190 GCSHP23434 173 aa6.62□□□□□ -1.35
CASC3-204ENST00000474190 PLNP26678 52 aa6.62□□□□□ -1.35
CASC3-204ENST00000474190 SYCNQ0VAF6 134 aa6.62□□□□□ -1.35
CASC3-204ENST00000474190 CIRBPQ14011 172 aaKnown RBP6.62□□□□□ -1.35
CASC3-204ENST00000474190 C9orf116Q5BN46 136 aaPredicted RBP6.62□□□□□ -1.35
CASC3-204ENST00000474190 COX7B2Q8TF08 81 aa6.62□□□□□ -1.35
CASC3-204ENST00000474190 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.62□□□□□ -1.35
CASC3-204ENST00000474190 H3BRM9 83 aa6.61□□□□□ -1.35
CASC3-204ENST00000474190 ZNF561-AS1K7EIQ3 104 aa6.61□□□□□ -1.35
CASC3-204ENST00000474190 XGP55808 180 aa6.61□□□□□ -1.35
CASC3-204ENST00000474190 STPG4Q8N801 248 aa6.61□□□□□ -1.35
CASC3-204ENST00000474190 CARD19Q96LW7 228 aa6.61□□□□□ -1.35
CASC3-204ENST00000474190 IGKV2D-26A0A0A0MRZ7 120 aa6.6□□□□□ -1.35
CASC3-204ENST00000474190 F8WDY8 70 aa6.6□□□□□ -1.35
CASC3-204ENST00000474190 S100A2P29034 98 aa6.6□□□□□ -1.35
CASC3-204ENST00000474190 RNF151Q2KHN1 245 aa6.6□□□□□ -1.35
CASC3-204ENST00000474190 MAJINQ3KP22 176 aa6.6□□□□□ -1.35
CASC3-204ENST00000474190 CAMK2N2Q96S95 79 aa6.6□□□□□ -1.35
CASC3-204ENST00000474190 TOMM7Q9P0U1 55 aa6.6□□□□□ -1.35
CASC3-204ENST00000474190 A0A096LNI7 61 aa6.59□□□□□ -1.35
CASC3-204ENST00000474190 EPM2AB3EWF7 344 aa6.59□□□□□ -1.35
CASC3-204ENST00000474190 NDUFA1O15239 70 aa6.59□□□□□ -1.35
CASC3-204ENST00000474190 TLX1NBP0CAT3 122 aa6.59□□□□□ -1.35
CASC3-204ENST00000474190 CHTF8P0CG12 524 aa6.59□□□□□ -1.35
CASC3-204ENST00000474190 ANKRD39Q53RE8 183 aa6.59□□□□□ -1.35
CASC3-204ENST00000474190 Q6ZRP5 223 aa6.59□□□□□ -1.35
CASC3-204ENST00000474190 KRTAP7-1Q8IUC3 87 aa6.59□□□□□ -1.35
CASC3-204ENST00000474190 ATOH7Q8N100 152 aa6.59□□□□□ -1.35
CASC3-204ENST00000474190 TRBV30A0A0K0K1B3 111 aa6.58□□□□□ -1.36
CASC3-204ENST00000474190 E9PLD3 99 aa6.58□□□□□ -1.36
CASC3-204ENST00000474190 LEPROTO15243 131 aa6.58□□□□□ -1.36
CASC3-204ENST00000474190 C6orf226Q5I0X4 101 aa6.58□□□□□ -1.36
CASC3-204ENST00000474190 TTTY13Q9BZ97 58 aa6.58□□□□□ -1.36
CASC3-204ENST00000474190 HAMPP81172 84 aa6.57□□□□□ -1.36
CASC3-204ENST00000474190 SPACA4Q8TDM5 124 aa6.57□□□□□ -1.36
CASC3-204ENST00000474190 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.56□□□□□ -1.36
CASC3-204ENST00000474190 CXCL5P42830 114 aa6.56□□□□□ -1.36
CASC3-204ENST00000474190 PTTG1IPP53801 180 aa6.56□□□□□ -1.36
CASC3-204ENST00000474190 PYY3Q5JQD4 70 aa6.56□□□□□ -1.36
CASC3-204ENST00000474190 J3QQQ9 107 aa6.55□□□□□ -1.36
CASC3-204ENST00000474190 PRSS2P07478 247 aa6.55□□□□□ -1.36
CASC3-204ENST00000474190 JOSD1Q15040 202 aaPredicted RBP6.55□□□□□ -1.36
CASC3-204ENST00000474190 C9orf129Q5T035 196 aaKnown RBP6.55□□□□□ -1.36
CASC3-204ENST00000474190 Q8NDZ9 215 aa6.55□□□□□ -1.36
CASC3-204ENST00000474190 LOC107984640A0A0U1RRK4 108 aa6.54□□□□□ -1.36
CASC3-204ENST00000474190 A0A1W2PNN7 141 aa6.54□□□□□ -1.36
CASC3-204ENST00000474190 NDUFC2-KCTD14E9PQ53 114 aa6.54□□□□□ -1.36
CASC3-204ENST00000474190 CDK2AP2O75956 126 aa6.54□□□□□ -1.36
CASC3-204ENST00000474190 CKS1BP61024 79 aa6.54□□□□□ -1.36
CASC3-204ENST00000474190 SCXQ7RTU7 201 aa6.54□□□□□ -1.36
CASC3-204ENST00000474190 CIRBP-AS1Q8TBR5 109 aa6.54□□□□□ -1.36
CASC3-204ENST00000474190 PLEKHB2Q96CS7 222 aa6.54□□□□□ -1.36
CASC3-204ENST00000474190 LITAFQ99732 161 aa6.54□□□□□ -1.36
CASC3-204ENST00000474190 NDUFA12Q9UI09 145 aa6.54□□□□□ -1.36
CASC3-204ENST00000474190 DMBT1Q9UGM3 2413 aaPredicted RBP6.54□□□□□ -1.36
CASC3-204ENST00000474190 PKHD1L1Q86WI1 4243 aa6.53□□□□□ -1.36
CASC3-204ENST00000474190 C20orf202A1L168 122 aa6.53□□□□□ -1.36
CASC3-204ENST00000474190 PLAC8Q9NZF1 115 aa6.53□□□□□ -1.36
CASC3-204ENST00000474190 A0A087WYN8 130 aa6.52□□□□□ -1.37
CASC3-204ENST00000474190 IGKV2-24A0A0C4DH68 120 aa6.52□□□□□ -1.37
CASC3-204ENST00000474190 FAM168BA1KXE4 195 aa6.52□□□□□ -1.37
CASC3-204ENST00000474190 EIF4EBP3O60516 100 aaPredicted RBP6.52□□□□□ -1.37
CASC3-204ENST00000474190 PCP2Q8IVA1 136 aa6.52□□□□□ -1.37
CASC3-204ENST00000474190 TP73-AS1Q9UF72 201 aa6.52□□□□□ -1.37
CASC3-204ENST00000474190 ERG28Q9UKR5 140 aa6.52□□□□□ -1.37
CASC3-204ENST00000474190 A0A0J9YXY3 114 aa6.51□□□□□ -1.37
CASC3-204ENST00000474190 LOC105371267A0A1B0GV96 52 aa6.51□□□□□ -1.37
CASC3-204ENST00000474190 SCGB1D1O95968 90 aa6.51□□□□□ -1.37
CASC3-204ENST00000474190 HERVK_113P61574 105 aa6.51□□□□□ -1.37
CASC3-204ENST00000474190 GAGE2BQ13066 116 aa6.51□□□□□ -1.37
CASC3-204ENST00000474190 ADAMTSL4-AS1Q5T5F5 129 aa6.51□□□□□ -1.37
CASC3-204ENST00000474190 SMIM13P0DJ93 91 aa6.5□□□□□ -1.37
CASC3-204ENST00000474190 NMUP48645 174 aa6.5□□□□□ -1.37
CASC3-204ENST00000474190 KRTAP10-4P60372 401 aaPredicted RBP6.5□□□□□ -1.37
CASC3-204ENST00000474190 RPL18AQ02543 176 aaKnown RBP6.5□□□□□ -1.37
CASC3-204ENST00000474190 GAGE2EQ4V326 116 aa6.5□□□□□ -1.37
CASC3-204ENST00000474190 SERTAD4-AS1Q5TG53 156 aa6.5□□□□□ -1.37
CASC3-204ENST00000474190 KRTAP11-1Q8IUC1 163 aa6.5□□□□□ -1.37
CASC3-204ENST00000474190 XAGE1AQ9HD64 81 aa6.5□□□□□ -1.37
CASC3-204ENST00000474190 GAGE2DQ9UEU5 116 aa6.5□□□□□ -1.37
CASC3-204ENST00000474190 MYMXA0A1B0GTQ4 84 aa6.49□□□□□ -1.37
CASC3-204ENST00000474190 PFN2P35080 140 aa6.49□□□□□ -1.37
CASC3-204ENST00000474190 HERV-K104P63124 156 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms