RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 FLGP20930 4061 aaPredicted RBP0.89□□□□□ -2.27
CCDC39-203ENST00000473854 IGLV4-60A0A075B6I1 120 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 TRBV7-3A0A075B6L6 115 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.88□□□□□ -2.27
CCDC39-203ENST00000473854 A0A087WX48 190 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 TRGV1A0A0A0MS02 117 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 TRAV12-1A0A0B4J245 112 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 TRAV4A0A0B4J268 109 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 TRAV25A0A0B4J276 109 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 TRBV27A0A0K0K1C4 114 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 C20orf202A1L168 122 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 IGKV2-29A2NJV5 120 aaPredicted RBP0.88□□□□□ -2.27
CCDC39-203ENST00000473854 IGIPA6NJ69 53 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 F8VRH5 84 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 K7EMI3 77 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 K7ERJ3 54 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 M0R143 59 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 M0R2P5 195 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 TAX1BP3O14907 124 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 DPM2O94777 84 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 IGHV3-53P01767 116 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 IGKCP01834 107 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 PPBPP02775 128 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 SMIM17P0DL12 118 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 ZNF22P17026 224 aaPredicted RBP0.88□□□□□ -2.27
CCDC39-203ENST00000473854 G0S2P27469 103 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 NMUP48645 174 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 HINT1P49773 126 aaPredicted RBP0.88□□□□□ -2.27
CCDC39-203ENST00000473854 FXYD2P54710 66 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 UBE2D3P61077 147 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 UBE2D2P62837 147 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 BATFQ16520 125 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 DEFB135Q30KP9 77 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 LINC01620Q4KN68 170 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 RNASE13Q5GAN3 156 aaKnown RBP0.88□□□□□ -2.27
CCDC39-203ENST00000473854 BVES-AS1Q5T3Y7 98 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 SLC25A34Q6PIV7 304 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 CEMP1Q6PRD7 247 aaPredicted RBP0.88□□□□□ -2.27
CCDC39-203ENST00000473854 Q6ZN92 141 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 NTM-AS1Q6ZSK4 140 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 SMIM15Q7Z3B0 74 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 MRPL52Q86TS9 123 aaKnown RBP0.88□□□□□ -2.27
CCDC39-203ENST00000473854 SBSPONQ8IVN8 264 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 BOD1L2Q8IYS8 172 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 LINC00469Q8N7U9 141 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 C20orf203Q8NBC4 194 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 TMEM263Q8WUH6 116 aaKnown RBP0.88□□□□□ -2.27
CCDC39-203ENST00000473854 PTH2Q96A98 100 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 IFI27L1Q96BM0 104 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 PLEKHB2Q96CS7 222 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 C20orf78Q9BR46 151 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 CHCHD7Q9BUK0 85 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 CHAC1Q9BUX1 264 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 RETNQ9HD89 108 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 NOP10Q9NPE3 64 aaKnown RBP0.88□□□□□ -2.27
CCDC39-203ENST00000473854 NXT2Q9NPJ8 142 aaKnown RBP0.88□□□□□ -2.27
CCDC39-203ENST00000473854 HHLA3Q9XRX5 114 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 CYSLTR1Q9Y271 337 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 MRPS16Q9Y3D3 137 aaKnown RBP0.88□□□□□ -2.27
CCDC39-203ENST00000473854 GOLT1BQ9Y3E0 138 aa0.88□□□□□ -2.27
CCDC39-203ENST00000473854 RNF213Q63HN8 5207 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 TRBV25-1A0A075B6N4 114 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 IGHV3-64A0A075B6Q5 118 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 TRAV8-3A0A0A6YYJ7 113 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 A0A0J9YXV3 536 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 A0A0J9YXY3 114 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 A0A0J9YY99 117 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 TMEM223A0PJW6 202 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 A8MWV9 139 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 HSBP1L1C9JCN9 74 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 G3V4G9 280 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 H7C1H1 209 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 I3L3M4 83 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 DEFB4AO15263 64 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 DLEU1O43261 78 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 ATP5LO75964 103 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 HTN1P15515 57 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 ZNF25P17030 456 aaPredicted RBP0.87□□□□□ -2.27
CCDC39-203ENST00000473854 UBE2D1P51668 147 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 COX6A2Q02221 97 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 HSD52Q0P140 79 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 DAZ2Q13117 558 aaKnown RBP0.87□□□□□ -2.27
CCDC39-203ENST00000473854 SCGB2A2Q13296 93 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 PMVKQ15126 192 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 RHOHQ15669 191 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 ORMDL2Q53FV1 153 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 MPV17L2Q567V2 206 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 FAM222AQ5U5X8 452 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 C10orf126Q8N4M7 172 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 SLC25A29Q8N8R3 303 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 Q8NAQ8 132 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 OR5A1Q8NGJ0 315 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 C7orf33Q8WU49 177 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 DNAJC30Q96LL9 226 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 SCGB3A1Q96QR1 104 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 LINC01587Q99440 93 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 TIMM17AQ99595 171 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 NAA38Q9BRA0 125 aaKnown RBP0.87□□□□□ -2.27
CCDC39-203ENST00000473854 PRADC1Q9BSG0 188 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 TMEM208Q9BTX3 173 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms