RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 CBLN2Q8IUK8 224 aa8.16□□□□□ -1.1
SHROOM3-204ENST00000473602 FABP9Q0Z7S8 132 aa8.15□□□□□ -1.1
SHROOM3-204ENST00000473602 ERASQ7Z444 233 aa8.15□□□□□ -1.1
SHROOM3-204ENST00000473602 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.14□□□□□ -1.11
SHROOM3-204ENST00000473602 HERVK_113P63121 156 aa8.14□□□□□ -1.11
SHROOM3-204ENST00000473602 C5orf52A6NGY3 159 aa8.13□□□□□ -1.11
SHROOM3-204ENST00000473602 AKR1D1P51857 326 aa8.13□□□□□ -1.11
SHROOM3-204ENST00000473602 GAGE2BQ13066 116 aa8.13□□□□□ -1.11
SHROOM3-204ENST00000473602 FA2HQ7L5A8 372 aa8.13□□□□□ -1.11
SHROOM3-204ENST00000473602 SCGB3A1Q96QR1 104 aa8.13□□□□□ -1.11
SHROOM3-204ENST00000473602 TLX1NBP0CAT3 122 aa8.12□□□□□ -1.11
SHROOM3-204ENST00000473602 RPL18AQ02543 176 aaKnown RBP8.12□□□□□ -1.11
SHROOM3-204ENST00000473602 KIAA0087Q14695 138 aa8.12□□□□□ -1.11
SHROOM3-204ENST00000473602 ZC2HC1BQ5TFG8 222 aa8.12□□□□□ -1.11
SHROOM3-204ENST00000473602 TRAPPC1Q9Y5R8 145 aa8.12□□□□□ -1.11
SHROOM3-204ENST00000473602 TRBV30A0A0K0K1B3 111 aa8.11□□□□□ -1.11
SHROOM3-204ENST00000473602 S100A2P29034 98 aa8.11□□□□□ -1.11
SHROOM3-204ENST00000473602 GEMIN7Q9H840 131 aaKnown RBP8.11□□□□□ -1.11
SHROOM3-204ENST00000473602 C10orf25Q5T742 122 aa8.1□□□□□ -1.11
SHROOM3-204ENST00000473602 UNQ6190/PRO20217Q6UXQ8 127 aa8.1□□□□□ -1.11
SHROOM3-204ENST00000473602 C12orf57Q99622 126 aa8.1□□□□□ -1.11
SHROOM3-204ENST00000473602 C6orf48Q9UBA6 75 aa8.1□□□□□ -1.11
SHROOM3-204ENST00000473602 A0A0J9YXV3 536 aa8.09□□□□□ -1.11
SHROOM3-204ENST00000473602 PRSS2P07478 247 aa8.09□□□□□ -1.11
SHROOM3-204ENST00000473602 PRR3P79522 188 aaKnown RBP8.09□□□□□ -1.11
SHROOM3-204ENST00000473602 Q8IZM0 81 aa8.09□□□□□ -1.11
SHROOM3-204ENST00000473602 C18orf32Q8TCD1 76 aa8.09□□□□□ -1.11
SHROOM3-204ENST00000473602 PACRGQ96M98 296 aaPredicted RBP8.09□□□□□ -1.11
SHROOM3-204ENST00000473602 CDKN2A-AS1Q9UH64 79 aa8.09□□□□□ -1.11
SHROOM3-204ENST00000473602 TINCRA0A1B0GVN0 87 aa8.08□□□□□ -1.12
SHROOM3-204ENST00000473602 PMVKQ15126 192 aa8.08□□□□□ -1.12
SHROOM3-204ENST00000473602 C9orf116Q5BN46 136 aaPredicted RBP8.08□□□□□ -1.12
SHROOM3-204ENST00000473602 IGLV5-45A0A087WSX0 123 aa8.07□□□□□ -1.12
SHROOM3-204ENST00000473602 A0A1W2PNN7 141 aa8.07□□□□□ -1.12
SHROOM3-204ENST00000473602 LINC00614P0C842 121 aa8.07□□□□□ -1.12
SHROOM3-204ENST00000473602 CKS1BP61024 79 aa8.07□□□□□ -1.12
SHROOM3-204ENST00000473602 SNRPEP62304 92 aaKnown RBP8.07□□□□□ -1.12
SHROOM3-204ENST00000473602 C6orf226Q5I0X4 101 aa8.07□□□□□ -1.12
SHROOM3-204ENST00000473602 C2orf82Q6UX34 121 aa8.07□□□□□ -1.12
SHROOM3-204ENST00000473602 YPEL4Q96NS1 127 aa8.07□□□□□ -1.12
SHROOM3-204ENST00000473602 CST9LQ9H4G1 147 aa8.07□□□□□ -1.12
SHROOM3-204ENST00000473602 TOMM7Q9P0U1 55 aa8.07□□□□□ -1.12
SHROOM3-204ENST00000473602 CXCL5P42830 114 aa8.06□□□□□ -1.12
SHROOM3-204ENST00000473602 Q6ZRP5 223 aa8.06□□□□□ -1.12
SHROOM3-204ENST00000473602 LINC00469Q8N7U9 141 aa8.06□□□□□ -1.12
SHROOM3-204ENST00000473602 A0A096LNJ9 63 aa8.05□□□□□ -1.12
SHROOM3-204ENST00000473602 NDUFC2-KCTD14E9PQ53 114 aa8.05□□□□□ -1.12
SHROOM3-204ENST00000473602 HBDP02042 147 aa8.05□□□□□ -1.12
SHROOM3-204ENST00000473602 PDZD11Q5EBL8 140 aa8.05□□□□□ -1.12
SHROOM3-204ENST00000473602 URB1-AS1Q96HZ7 61 aa8.05□□□□□ -1.12
SHROOM3-204ENST00000473602 SMIM1B2RUZ4 78 aa8.04□□□□□ -1.12
SHROOM3-204ENST00000473602 F8VRH5 84 aa8.03□□□□□ -1.12
SHROOM3-204ENST00000473602 ATP5LO75964 103 aa8.03□□□□□ -1.12
SHROOM3-204ENST00000473602 GAGE2EQ4V326 116 aa8.03□□□□□ -1.12
SHROOM3-204ENST00000473602 GAGE2DQ9UEU5 116 aa8.03□□□□□ -1.12
SHROOM3-204ENST00000473602 H3BRM9 83 aa8.02□□□□□ -1.13
SHROOM3-204ENST00000473602 SPINK6Q6UWN8 80 aa8.02□□□□□ -1.13
SHROOM3-204ENST00000473602 IGLC3P0DOY3 106 aa8.01□□□□□ -1.13
SHROOM3-204ENST00000473602 PHF5AQ7RTV0 110 aaKnown RBP8.01□□□□□ -1.13
SHROOM3-204ENST00000473602 COX7B2Q8TF08 81 aa8.01□□□□□ -1.13
SHROOM3-204ENST00000473602 CHCHD1Q96BP2 118 aaKnown RBP8.01□□□□□ -1.13
SHROOM3-204ENST00000473602 FAM168BA1KXE4 195 aa8□□□□□ -1.13
SHROOM3-204ENST00000473602 NDUFA6P56556 154 aa8□□□□□ -1.13
SHROOM3-204ENST00000473602 PMCHL1Q16048 86 aa8□□□□□ -1.13
SHROOM3-204ENST00000473602 COA6Q5JTJ3 125 aaKnown RBP8□□□□□ -1.13
SHROOM3-204ENST00000473602 FAM19A5Q7Z5A7 132 aaPredicted RBP8□□□□□ -1.13
SHROOM3-204ENST00000473602 PSORS1C2Q9UIG4 136 aa8□□□□□ -1.13
SHROOM3-204ENST00000473602 SPINK8P0C7L1 97 aa7.99□□□□□ -1.13
SHROOM3-204ENST00000473602 ODF1Q14990 250 aa7.99□□□□□ -1.13
SHROOM3-204ENST00000473602 C9orf129Q5T035 196 aaKnown RBP7.99□□□□□ -1.13
SHROOM3-204ENST00000473602 M0QXV9 152 aa7.98□□□□□ -1.13
SHROOM3-204ENST00000473602 SRSF9Q13242 221 aaKnown RBP eCLIP7.98□□□□□ -1.13
SHROOM3-204ENST00000473602 LBHQ53QV2 105 aaPredicted RBP7.98□□□□□ -1.13
SHROOM3-204ENST00000473602 REG3GQ6UW15 175 aa7.98□□□□□ -1.13
SHROOM3-204ENST00000473602 TSTD3H0UI37 97 aa7.97□□□□□ -1.13
SHROOM3-204ENST00000473602 HIST1H2BKO60814 126 aa7.97□□□□□ -1.13
SHROOM3-204ENST00000473602 TRGC2P03986 189 aa7.97□□□□□ -1.13
SHROOM3-204ENST00000473602 HIST1H2BJP06899 126 aa7.97□□□□□ -1.13
SHROOM3-204ENST00000473602 HIST1H2BOP23527 126 aa7.97□□□□□ -1.13
SHROOM3-204ENST00000473602 HIST1H2BBP33778 126 aa7.97□□□□□ -1.13
SHROOM3-204ENST00000473602 HIST1H2BDP58876 126 aa7.97□□□□□ -1.13
SHROOM3-204ENST00000473602 HIST1H2BCP62807 126 aa7.97□□□□□ -1.13
SHROOM3-204ENST00000473602 CTAG1AP78358 180 aa7.97□□□□□ -1.13
SHROOM3-204ENST00000473602 HIST2H2BEQ16778 126 aa7.97□□□□□ -1.13
SHROOM3-204ENST00000473602 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.97□□□□□ -1.13
SHROOM3-204ENST00000473602 HIST1H2BHQ93079 126 aa7.97□□□□□ -1.13
SHROOM3-204ENST00000473602 HIST1H2BNQ99877 126 aa7.97□□□□□ -1.13
SHROOM3-204ENST00000473602 HIST1H2BMQ99879 126 aa7.97□□□□□ -1.13
SHROOM3-204ENST00000473602 IGLV5-39A0A0G2JS06 123 aa7.96□□□□□ -1.14
SHROOM3-204ENST00000473602 PCP4L1A6NKN8 68 aa7.96□□□□□ -1.14
SHROOM3-204ENST00000473602 ZNF22P17026 224 aaPredicted RBP7.96□□□□□ -1.14
SHROOM3-204ENST00000473602 C1orf137Q5JT78 98 aa7.96□□□□□ -1.14
SHROOM3-204ENST00000473602 BAGE3Q86Y29 109 aa7.96□□□□□ -1.14
SHROOM3-204ENST00000473602 KRTAP7-1Q8IUC3 87 aa7.96□□□□□ -1.14
SHROOM3-204ENST00000473602 LINC01600Q96MT4 127 aa7.96□□□□□ -1.14
SHROOM3-204ENST00000473602 HSBP1O75506 76 aa7.95□□□□□ -1.14
SHROOM3-204ENST00000473602 SFTA2Q6UW10 78 aa7.95□□□□□ -1.14
SHROOM3-204ENST00000473602 TRAV12-1A0A0B4J245 112 aa7.94□□□□□ -1.14
SHROOM3-204ENST00000473602 UBE2BP63146 152 aa7.94□□□□□ -1.14
SHROOM3-204ENST00000473602 HIST3H2BBQ8N257 126 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms