RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 NTM-AS1Q6ZSK4 140 aa4.37□□□□□ -1.71
HDAC1-205ENST00000472928 Q6ZUT4 128 aa4.37□□□□□ -1.71
HDAC1-205ENST00000472928 RAB37Q96AX2 223 aa4.37□□□□□ -1.71
HDAC1-205ENST00000472928 TIMM17AQ99595 171 aa4.37□□□□□ -1.71
HDAC1-205ENST00000472928 IGLV4-3A0A075B6K6 122 aa4.36□□□□□ -1.71
HDAC1-205ENST00000472928 A0A0A0MQY5 61 aa4.36□□□□□ -1.71
HDAC1-205ENST00000472928 TRBV6-8A0A0A6YYG3 113 aa4.36□□□□□ -1.71
HDAC1-205ENST00000472928 IGIPA6NJ69 53 aa4.36□□□□□ -1.71
HDAC1-205ENST00000472928 H3BMG7 143 aa4.36□□□□□ -1.71
HDAC1-205ENST00000472928 HERV-K104P63124 156 aa4.36□□□□□ -1.71
HDAC1-205ENST00000472928 SH2D6Q7Z4S9 175 aa4.36□□□□□ -1.71
HDAC1-205ENST00000472928 BAALCQ8WXS3 180 aa4.36□□□□□ -1.71
HDAC1-205ENST00000472928 TMEM141Q96I45 108 aa4.36□□□□□ -1.71
HDAC1-205ENST00000472928 NAA38Q9BRA0 125 aaKnown RBP4.36□□□□□ -1.71
HDAC1-205ENST00000472928 ANAPC13Q9BS18 74 aa4.36□□□□□ -1.71
HDAC1-205ENST00000472928 CHCHD5Q9BSY4 110 aa4.36□□□□□ -1.71
HDAC1-205ENST00000472928 SS18L2Q9UHA2 77 aa4.36□□□□□ -1.71
HDAC1-205ENST00000472928 UBE2D4Q9Y2X8 147 aa4.36□□□□□ -1.71
HDAC1-205ENST00000472928 TRAV12-1A0A0B4J245 112 aa4.35□□□□□ -1.71
HDAC1-205ENST00000472928 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
HDAC1-205ENST00000472928 TMEM262E9PQX1 116 aa4.35□□□□□ -1.71
HDAC1-205ENST00000472928 H3BNG1 76 aa4.35□□□□□ -1.71
HDAC1-205ENST00000472928 INAFM2P0DMQ5 153 aa4.35□□□□□ -1.71
HDAC1-205ENST00000472928 ETDBQ3ZM63 59 aa4.35□□□□□ -1.71
HDAC1-205ENST00000472928 RNASE13Q5GAN3 156 aaKnown RBP4.35□□□□□ -1.71
HDAC1-205ENST00000472928 ZC2HC1BQ5TFG8 222 aa4.35□□□□□ -1.71
HDAC1-205ENST00000472928 OPRPNQ99935 248 aaPredicted RBP4.35□□□□□ -1.71
HDAC1-205ENST00000472928 TIMM21Q9BVV7 248 aa4.35□□□□□ -1.71
HDAC1-205ENST00000472928 PYGO1Q9Y3Y4 419 aa4.35□□□□□ -1.71
HDAC1-205ENST00000472928 A0A087WX48 190 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 A0A1B0GWB2 263 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 EPM2AB3EWF7 344 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 DPM2O94777 84 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 APOMO95445 188 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 FXYD2P54710 66 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 PMVKQ15126 192 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 PAPPA-AS1Q5QFB9 102 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 SERTAD4-AS1Q5TG53 156 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 Q6Q795 121 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 UBE2DNLQ8IWF7 75 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 CEND1Q8N111 149 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 C15orf53Q8NAA6 179 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 PPDPFLQ8WWR9 84 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 TMEM101Q96IK0 257 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 CHAC1Q9BUX1 264 aa4.34□□□□□ -1.71
HDAC1-205ENST00000472928 MRPL35Q9NZE8 188 aaKnown RBP4.34□□□□□ -1.71
HDAC1-205ENST00000472928 F8VRH5 84 aa4.33□□□□□ -1.72
HDAC1-205ENST00000472928 H7C423 109 aa4.33□□□□□ -1.72
HDAC1-205ENST00000472928 IGKCP01834 107 aa4.33□□□□□ -1.72
HDAC1-205ENST00000472928 MT-ATP8P03928 68 aa4.33□□□□□ -1.72
HDAC1-205ENST00000472928 PLNP26678 52 aa4.33□□□□□ -1.72
HDAC1-205ENST00000472928 MRPS36P82909 103 aaKnown RBP4.33□□□□□ -1.72
HDAC1-205ENST00000472928 LELP1Q5T871 98 aa4.33□□□□□ -1.72
HDAC1-205ENST00000472928 IGLV4-69A0A075B6H9 119 aa4.32□□□□□ -1.72
HDAC1-205ENST00000472928 M0QXV9 152 aa4.32□□□□□ -1.72
HDAC1-205ENST00000472928 XGP55808 180 aa4.32□□□□□ -1.72
HDAC1-205ENST00000472928 LYRM7Q5U5X0 104 aa4.32□□□□□ -1.72
HDAC1-205ENST00000472928 PCP2Q8IVA1 136 aa4.32□□□□□ -1.72
HDAC1-205ENST00000472928 C6orf223Q8N319 242 aa4.32□□□□□ -1.72
HDAC1-205ENST00000472928 FAM104AQ969W3 186 aa4.32□□□□□ -1.72
HDAC1-205ENST00000472928 AMELXQ99217 191 aa4.32□□□□□ -1.72
HDAC1-205ENST00000472928 TMEM126AQ9H061 195 aa4.32□□□□□ -1.72
HDAC1-205ENST00000472928 IGLV4-60A0A075B6I1 120 aa4.31□□□□□ -1.72
HDAC1-205ENST00000472928 TRAV13-1A0A0B4J241 112 aa4.31□□□□□ -1.72
HDAC1-205ENST00000472928 IGKV3OR2-268A0A0C4DH90 116 aa4.31□□□□□ -1.72
HDAC1-205ENST00000472928 A0A0J9YXV3 536 aa4.31□□□□□ -1.72
HDAC1-205ENST00000472928 NBDYA0A0U1RRE5 68 aa4.31□□□□□ -1.72
HDAC1-205ENST00000472928 C11orf86A6NJI1 115 aa4.31□□□□□ -1.72
HDAC1-205ENST00000472928 NMUP48645 174 aa4.31□□□□□ -1.72
HDAC1-205ENST00000472928 CLPSL2Q6UWE3 100 aa4.31□□□□□ -1.72
HDAC1-205ENST00000472928 LYPD5Q6UWN5 251 aa4.31□□□□□ -1.72
HDAC1-205ENST00000472928 SMIM20Q8N5G0 67 aa4.31□□□□□ -1.72
HDAC1-205ENST00000472928 CDC42SE2Q9NRR3 84 aa4.31□□□□□ -1.72
HDAC1-205ENST00000472928 NHP2Q9NX24 153 aaKnown RBP4.31□□□□□ -1.72
HDAC1-205ENST00000472928 CSDC2Q9Y534 153 aaKnown RBP4.31□□□□□ -1.72
HDAC1-205ENST00000472928 LRP1Q07954 4544 aaKnown RBP4.3□□□□□ -1.72
HDAC1-205ENST00000472928 K7ERJ3 54 aa4.3□□□□□ -1.72
HDAC1-205ENST00000472928 ANGP03950 147 aaKnown RBP4.3□□□□□ -1.72
HDAC1-205ENST00000472928 ZNF22P17026 224 aaPredicted RBP4.3□□□□□ -1.72
HDAC1-205ENST00000472928 UBE2D1P51668 147 aa4.3□□□□□ -1.72
HDAC1-205ENST00000472928 ESRGQ1W209 222 aa4.3□□□□□ -1.72
HDAC1-205ENST00000472928 TMEM170BQ5T4T1 132 aa4.3□□□□□ -1.72
HDAC1-205ENST00000472928 Q5VSD8 79 aa4.3□□□□□ -1.72
HDAC1-205ENST00000472928 TEN1Q86WV5 123 aa4.3□□□□□ -1.72
HDAC1-205ENST00000472928 WFDC10BQ8IUB3 73 aa4.3□□□□□ -1.72
HDAC1-205ENST00000472928 SPANXDQ9BXN6 97 aa4.3□□□□□ -1.72
HDAC1-205ENST00000472928 SPANXCQ9NY87 97 aa4.3□□□□□ -1.72
HDAC1-205ENST00000472928 A0A1B0GUV1 79 aa4.29□□□□□ -1.72
HDAC1-205ENST00000472928 TINCRA0A1B0GVN0 87 aa4.29□□□□□ -1.72
HDAC1-205ENST00000472928 IGHV3-30P01768 117 aa4.29□□□□□ -1.72
HDAC1-205ENST00000472928 IGHV3-33P01772 117 aa4.29□□□□□ -1.72
HDAC1-205ENST00000472928 IGHV3-30-3P0DP02 117 aa4.29□□□□□ -1.72
HDAC1-205ENST00000472928 IGHV3-30-5P0DP03 117 aa4.29□□□□□ -1.72
HDAC1-205ENST00000472928 NDUFV3P56181 108 aaKnown RBP4.29□□□□□ -1.72
HDAC1-205ENST00000472928 HERVK_113P61574 105 aa4.29□□□□□ -1.72
HDAC1-205ENST00000472928 GAGE2BQ13066 116 aa4.29□□□□□ -1.72
HDAC1-205ENST00000472928 GAGE2EQ4V326 116 aa4.29□□□□□ -1.72
HDAC1-205ENST00000472928 C5orf47Q569G3 176 aa4.29□□□□□ -1.72
HDAC1-205ENST00000472928 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
HDAC1-205ENST00000472928 NFE4Q86UQ8 179 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms