RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 DNAH17Q9UFH2 4485 aa1.24□□□□□ -2.21
XRN1-210ENST00000472697 TRAV12-1A0A0B4J245 112 aa1.24□□□□□ -2.21
XRN1-210ENST00000472697 HIST1H1BP16401 226 aaKnown RBP1.24□□□□□ -2.21
XRN1-210ENST00000472697 LINC00322Q6ZN03 302 aaPredicted RBP1.24□□□□□ -2.21
XRN1-210ENST00000472697 OR4B1Q8NGF8 309 aa1.24□□□□□ -2.21
XRN1-210ENST00000472697 MYOZ3Q8TDC0 251 aa1.24□□□□□ -2.21
XRN1-210ENST00000472697 LRP1BQ9NZR2 4599 aa1.24□□□□□ -2.21
XRN1-210ENST00000472697 PKHD1P08F94 4074 aa1.24□□□□□ -2.21
XRN1-210ENST00000472697 MIFP14174 115 aa1.23□□□□□ -2.21
XRN1-210ENST00000472697 GUCA1AP43080 201 aaPredicted RBP1.23□□□□□ -2.21
XRN1-210ENST00000472697 TCTEX1D1Q8N7M0 179 aa1.23□□□□□ -2.21
XRN1-210ENST00000472697 TXNDC17Q9BRA2 123 aa1.23□□□□□ -2.21
XRN1-210ENST00000472697 DNAL4O96015 105 aa1.23□□□□□ -2.21
XRN1-210ENST00000472697 FGF7P21781 194 aa1.23□□□□□ -2.21
XRN1-210ENST00000472697 RBM3P98179 157 aaKnown RBP1.23□□□□□ -2.21
XRN1-210ENST00000472697 PDE6HQ13956 83 aa1.23□□□□□ -2.21
XRN1-210ENST00000472697 CMTM2Q8TAZ6 248 aa1.23□□□□□ -2.21
XRN1-210ENST00000472697 METTL1Q9UBP6 276 aaKnown RBP1.23□□□□□ -2.21
XRN1-210ENST00000472697 STARD9Q9P2P6 4700 aa1.23□□□□□ -2.21
XRN1-210ENST00000472697 FAT3Q8TDW7 4589 aa1.23□□□□□ -2.21
XRN1-210ENST00000472697 FSIP2Q5CZC0 6907 aa1.23□□□□□ -2.21
XRN1-210ENST00000472697 LOC107986453A0A1B0GWG9 222 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 BBIP1A8MTZ0 92 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 E7EUB6 86 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 AKAIN1P0CW23 69 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 COA5Q86WW8 74 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 TMEM254Q8TBM7 123 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 C20orf202A1L168 122 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 F8W1H4 67 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 HMGN2P05204 90 aaKnown RBP1.22□□□□□ -2.21
XRN1-210ENST00000472697 PYYP10082 97 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 INSL4Q14641 139 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 C1orf137Q5JT78 98 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 LINC01545Q5VT33 79 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 PP6455Q8WZ26 134 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 DPY30Q9C005 99 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 C14orf132Q9NPU4 83 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 DNAH2Q9P225 4427 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 RNF213Q63HN8 5207 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 H3BUA1 57 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 ZNF833PQ6ZTB9 187 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 ARPINQ7Z6K5 226 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 VPS13BQ7Z7G8 4022 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 C1orf54Q8WWF1 131 aa1.22□□□□□ -2.21
XRN1-210ENST00000472697 MRPL57Q9BQC6 102 aaKnown RBP1.22□□□□□ -2.21
XRN1-210ENST00000472697 TRAV14DV4A0A0A6YYC5 116 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 UBE2G1P62253 170 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 CASC2Q6XLA1 102 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 LYPD1Q8N2G4 141 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 CDC42SE1Q9NRR8 79 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 TMEM242Q9NWH2 141 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 ZFP30Q9Y2G7 519 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 TRBV20-1A0A075B6N2 111 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 SLC25A26Q70HW3 274 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 C5orf56Q8N8D9 126 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 SPTSSBQ8NFR3 76 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 DEFB104AQ8WTQ1 72 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 PPP3R2Q96LZ3 170 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 APLNQ9ULZ1 77 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 MPC1Q9Y5U8 109 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 HMCN2Q8NDA2 5059 aa1.21□□□□□ -2.22
XRN1-210ENST00000472697 ERC2-IT1O76042 136 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 GYPAP02724 150 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 BAALC-AS2P0C853 105 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 RBP2P50120 134 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 Q5VSD8 79 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 IDO2Q6ZQW0 420 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 GAFA1Q96PS6 74 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 WFDC10AQ9H1F0 79 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 LINC00312Q9Y6C7 94 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 HSPG2P98160 4391 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 SYNE2Q8WXH0 6885 aaKnown RBP1.2□□□□□ -2.22
XRN1-210ENST00000472697 SPANXN5Q5MJ07 72 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 KCNRGQ8N5I3 272 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 SPTSSAQ969W0 71 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 SMIM7Q9BQ49 75 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 AGPAT4-IT1Q9H0P7 198 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 NHP2Q9NX24 153 aaKnown RBP1.2□□□□□ -2.22
XRN1-210ENST00000472697 NDUFA12Q9UI09 145 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 VPS13DQ5THJ4 4388 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 CSMD3Q7Z407 3707 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 FRAS1Q86XX4 4008 aa1.2□□□□□ -2.22
XRN1-210ENST00000472697 TRAV23DV6A0A075B6W5 121 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 C17orf112F2Z3M2 114 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 H3BSH0 61 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 M0R2P5 195 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 TPST1O60507 370 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 SLC25A6P12236 298 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 S100A10P60903 97 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 KRTAP13-4Q3LI77 160 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 LYPD5Q6UWN5 251 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 C3orf62Q6ZUJ4 267 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 OBSCN-AS1Q96MR7 158 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 SPANXCQ9NY87 97 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 LINC00474Q9P2X8 69 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 A0A1B0GWA3 101 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 ZNF736B4DX44 427 aaPredicted RBP1.19□□□□□ -2.22
XRN1-210ENST00000472697 PPYP01298 95 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 IFNA17P01571 189 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms