RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 PAPPA-AS1Q5QFB9 102 aa3.36□□□□□ -1.87
SIK3-208ENST00000472648 YPEL4Q96NS1 127 aa3.36□□□□□ -1.87
SIK3-208ENST00000472648 FAM168BA1KXE4 195 aa3.35□□□□□ -1.87
SIK3-208ENST00000472648 PRSS47A8MTI9 375 aa3.35□□□□□ -1.87
SIK3-208ENST00000472648 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.35□□□□□ -1.87
SIK3-208ENST00000472648 ZNF861PO60384 105 aa3.35□□□□□ -1.87
SIK3-208ENST00000472648 HSBP1O75506 76 aa3.35□□□□□ -1.87
SIK3-208ENST00000472648 S100A6P06703 90 aa3.35□□□□□ -1.87
SIK3-208ENST00000472648 NDUFA6P56556 154 aa3.35□□□□□ -1.87
SIK3-208ENST00000472648 SS18Q15532 418 aa3.35□□□□□ -1.87
SIK3-208ENST00000472648 C2orf66Q6UXQ4 117 aa3.35□□□□□ -1.87
SIK3-208ENST00000472648 FAM19A5Q7Z5A7 132 aaPredicted RBP3.35□□□□□ -1.87
SIK3-208ENST00000472648 C18orf32Q8TCD1 76 aa3.35□□□□□ -1.87
SIK3-208ENST00000472648 CHCHD1Q96BP2 118 aaKnown RBP3.35□□□□□ -1.87
SIK3-208ENST00000472648 SCGB3A1Q96QR1 104 aa3.35□□□□□ -1.87
SIK3-208ENST00000472648 CAMK2N2Q96S95 79 aa3.35□□□□□ -1.87
SIK3-208ENST00000472648 C2orf88Q9BSF0 95 aa3.35□□□□□ -1.87
SIK3-208ENST00000472648 VCX2Q9H322 139 aa3.35□□□□□ -1.87
SIK3-208ENST00000472648 SPANXA1Q9NS26 97 aa3.35□□□□□ -1.87
SIK3-208ENST00000472648 FCGBPQ9Y6R7 5405 aaPredicted RBP3.34□□□□□ -1.87
SIK3-208ENST00000472648 IFITM10A6NMD0 228 aa3.34□□□□□ -1.87
SIK3-208ENST00000472648 M0QXV9 152 aa3.34□□□□□ -1.87
SIK3-208ENST00000472648 CCL25O15444 150 aa3.34□□□□□ -1.87
SIK3-208ENST00000472648 HBDP02042 147 aa3.34□□□□□ -1.87
SIK3-208ENST00000472648 ESDP10768 282 aa3.34□□□□□ -1.87
SIK3-208ENST00000472648 RPL39P62891 51 aaKnown RBP3.34□□□□□ -1.87
SIK3-208ENST00000472648 KRTAP13-3Q3SY46 172 aa3.34□□□□□ -1.87
SIK3-208ENST00000472648 TEX43Q6ZNM6 134 aa3.34□□□□□ -1.87
SIK3-208ENST00000472648 FP248Q71RG6 208 aaPredicted RBP3.34□□□□□ -1.87
SIK3-208ENST00000472648 MRPL52Q86TS9 123 aaKnown RBP3.34□□□□□ -1.87
SIK3-208ENST00000472648 TMEM141Q96I45 108 aa3.34□□□□□ -1.87
SIK3-208ENST00000472648 UBE2D4Q9Y2X8 147 aa3.34□□□□□ -1.87
SIK3-208ENST00000472648 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.88
SIK3-208ENST00000472648 USH2AO75445 5202 aa3.34□□□□□ -1.88
SIK3-208ENST00000472648 TRAV13-1A0A0B4J241 112 aa3.33□□□□□ -1.88
SIK3-208ENST00000472648 ATP5LO75964 103 aa3.33□□□□□ -1.88
SIK3-208ENST00000472648 MALP21145 153 aa3.33□□□□□ -1.88
SIK3-208ENST00000472648 CTAG1AP78358 180 aa3.33□□□□□ -1.88
SIK3-208ENST00000472648 PMCHL1Q16048 86 aa3.33□□□□□ -1.88
SIK3-208ENST00000472648 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
SIK3-208ENST00000472648 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
SIK3-208ENST00000472648 ERASQ7Z444 233 aa3.33□□□□□ -1.88
SIK3-208ENST00000472648 TOMM6Q96B49 74 aa3.33□□□□□ -1.88
SIK3-208ENST00000472648 OPRPNQ99935 248 aaPredicted RBP3.33□□□□□ -1.88
SIK3-208ENST00000472648 TIMM21Q9BVV7 248 aa3.33□□□□□ -1.88
SIK3-208ENST00000472648 CDC42SE2Q9NRR3 84 aa3.33□□□□□ -1.88
SIK3-208ENST00000472648 PYGO1Q9Y3Y4 419 aa3.33□□□□□ -1.88
SIK3-208ENST00000472648 CSDC2Q9Y534 153 aaKnown RBP3.33□□□□□ -1.88
SIK3-208ENST00000472648 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
SIK3-208ENST00000472648 H0Y8G0 127 aa3.32□□□□□ -1.88
SIK3-208ENST00000472648 SERF1AO75920 110 aa3.32□□□□□ -1.88
SIK3-208ENST00000472648 LEPROTL1O95214 131 aa3.32□□□□□ -1.88
SIK3-208ENST00000472648 FABP4P15090 132 aa3.32□□□□□ -1.88
SIK3-208ENST00000472648 S100A2P29034 98 aa3.32□□□□□ -1.88
SIK3-208ENST00000472648 MRPS36P82909 103 aaKnown RBP3.32□□□□□ -1.88
SIK3-208ENST00000472648 RNF151Q2KHN1 245 aa3.32□□□□□ -1.88
SIK3-208ENST00000472648 KRTAP13-2Q52LG2 175 aa3.32□□□□□ -1.88
SIK3-208ENST00000472648 Q6ZUT4 128 aa3.32□□□□□ -1.88
SIK3-208ENST00000472648 FAM19A2Q8N3H0 131 aa3.32□□□□□ -1.88
SIK3-208ENST00000472648 TIMM17AQ99595 171 aa3.32□□□□□ -1.88
SIK3-208ENST00000472648 GEMIN7Q9H840 131 aaKnown RBP3.32□□□□□ -1.88
SIK3-208ENST00000472648 HSPB8Q9UJY1 196 aa3.32□□□□□ -1.88
SIK3-208ENST00000472648 IGLV4-3A0A075B6K6 122 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 LINC00959A0A1B0GUT2 108 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 LINC01546A6NGU7 62 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 NUPR1O60356 82 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 HIST1H2BKO60814 126 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 HIST1H2BJP06899 126 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 NPSP0C0P6 89 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 HIST1H2BOP23527 126 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 HIST1H2BBP33778 126 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 RPL28P46779 137 aaKnown RBP3.31□□□□□ -1.88
SIK3-208ENST00000472648 HIST1H2BDP58876 126 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 HIST1H2BCP62807 126 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 SEC11AP67812 179 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 PMVKQ15126 192 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 HIST2H2BEQ16778 126 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.31□□□□□ -1.88
SIK3-208ENST00000472648 HIST1H2BHQ93079 126 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 C2orf48Q96LS8 159 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 PACRGQ96M98 296 aaPredicted RBP3.31□□□□□ -1.88
SIK3-208ENST00000472648 HIST1H2BNQ99877 126 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 HIST1H2BMQ99879 126 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 MAP1LC3CQ9BXW4 147 aa3.31□□□□□ -1.88
SIK3-208ENST00000472648 FLGP20930 4061 aaPredicted RBP3.31□□□□□ -1.88
SIK3-208ENST00000472648 IGKV2D-26A0A0A0MRZ7 120 aa3.3□□□□□ -1.88
SIK3-208ENST00000472648 IGIPA6NJ69 53 aa3.3□□□□□ -1.88
SIK3-208ENST00000472648 H3BRM9 83 aa3.3□□□□□ -1.88
SIK3-208ENST00000472648 COX7A2LO14548 114 aa3.3□□□□□ -1.88
SIK3-208ENST00000472648 HERVK_113P63121 156 aa3.3□□□□□ -1.88
SIK3-208ENST00000472648 PDZD11Q5EBL8 140 aa3.3□□□□□ -1.88
SIK3-208ENST00000472648 CD164L2Q6UWJ8 174 aa3.3□□□□□ -1.88
SIK3-208ENST00000472648 IFI27L1Q96BM0 104 aa3.3□□□□□ -1.88
SIK3-208ENST00000472648 ANAPC11Q9NYG5 84 aa3.3□□□□□ -1.88
SIK3-208ENST00000472648 CHTOPQ9Y3Y2 248 aaKnown RBP3.3□□□□□ -1.88
SIK3-208ENST00000472648 PRSS2P07478 247 aa3.29□□□□□ -1.88
SIK3-208ENST00000472648 FAM229BQ4G0N7 80 aa3.29□□□□□ -1.88
SIK3-208ENST00000472648 GAGE2EQ4V326 116 aa3.29□□□□□ -1.88
SIK3-208ENST00000472648 C5orf38Q86SI9 138 aa3.29□□□□□ -1.88
SIK3-208ENST00000472648 LINC00469Q8N7U9 141 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms