RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 RPL39LQ96EH5 51 aaKnown RBP2.13□□□□□ -2.07
XRN1-209ENST00000472625 C20orf78Q9BR46 151 aa2.13□□□□□ -2.07
XRN1-209ENST00000472625 TIMM21Q9BVV7 248 aa2.13□□□□□ -2.07
XRN1-209ENST00000472625 TMEM242Q9NWH2 141 aa2.13□□□□□ -2.07
XRN1-209ENST00000472625 LINC00862A6NCI5 91 aa2.12□□□□□ -2.07
XRN1-209ENST00000472625 HIGD1CA8MV81 97 aa2.12□□□□□ -2.07
XRN1-209ENST00000472625 NDUFC2-KCTD14E9PQ53 114 aa2.12□□□□□ -2.07
XRN1-209ENST00000472625 F8W036 122 aa2.12□□□□□ -2.07
XRN1-209ENST00000472625 M0QXV9 152 aa2.12□□□□□ -2.07
XRN1-209ENST00000472625 IFI27P40305 119 aaPredicted RBP2.12□□□□□ -2.07
XRN1-209ENST00000472625 POLR2KP53803 58 aaKnown RBP2.12□□□□□ -2.07
XRN1-209ENST00000472625 RPL32P62910 135 aaKnown RBP2.12□□□□□ -2.07
XRN1-209ENST00000472625 HBBP68871 147 aa2.12□□□□□ -2.07
XRN1-209ENST00000472625 CTAG1AP78358 180 aa2.12□□□□□ -2.07
XRN1-209ENST00000472625 LBHQ53QV2 105 aaPredicted RBP2.12□□□□□ -2.07
XRN1-209ENST00000472625 Q6ZN92 141 aa2.12□□□□□ -2.07
XRN1-209ENST00000472625 ORAOV1Q8WV07 137 aa2.12□□□□□ -2.07
XRN1-209ENST00000472625 PACRGQ96M98 296 aaPredicted RBP2.12□□□□□ -2.07
XRN1-209ENST00000472625 C2orf88Q9BSF0 95 aa2.12□□□□□ -2.07
XRN1-209ENST00000472625 RNASE7Q9H1E1 156 aaKnown RBP2.12□□□□□ -2.07
XRN1-209ENST00000472625 NAT8BQ9UHF3 227 aa2.12□□□□□ -2.07
XRN1-209ENST00000472625 UBE2D4Q9Y2X8 147 aa2.12□□□□□ -2.07
XRN1-209ENST00000472625 K7EN84 100 aa2.11□□□□□ -2.07
XRN1-209ENST00000472625 PPBPP02775 128 aa2.11□□□□□ -2.07
XRN1-209ENST00000472625 RAB5AP20339 215 aa2.11□□□□□ -2.07
XRN1-209ENST00000472625 G0S2P27469 103 aa2.11□□□□□ -2.07
XRN1-209ENST00000472625 CXCL5P42830 114 aa2.11□□□□□ -2.07
XRN1-209ENST00000472625 RPL28P46779 137 aaKnown RBP2.11□□□□□ -2.07
XRN1-209ENST00000472625 SEC11AP67812 179 aa2.11□□□□□ -2.07
XRN1-209ENST00000472625 MRPS36P82909 103 aaKnown RBP2.11□□□□□ -2.07
XRN1-209ENST00000472625 PRR4Q16378 134 aa2.11□□□□□ -2.07
XRN1-209ENST00000472625 FAM74A3Q4VXF1 159 aa2.11□□□□□ -2.07
XRN1-209ENST00000472625 FAM19A5Q7Z5A7 132 aaPredicted RBP2.11□□□□□ -2.07
XRN1-209ENST00000472625 LINC01561Q8N1V8 128 aa2.11□□□□□ -2.07
XRN1-209ENST00000472625 OCC1Q8TAD7 63 aa2.11□□□□□ -2.07
XRN1-209ENST00000472625 LINC00526Q96FQ7 95 aa2.11□□□□□ -2.07
XRN1-209ENST00000472625 SMIM7Q9BQ49 75 aa2.11□□□□□ -2.07
XRN1-209ENST00000472625 SMDT1Q9H4I9 107 aa2.11□□□□□ -2.07
XRN1-209ENST00000472625 OSTCQ9NRP0 149 aa2.11□□□□□ -2.07
XRN1-209ENST00000472625 TRBV24-1A0A075B6N3 115 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 IGHV3OR16-9A0A0B4J2B5 98 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 A0A1W2PNN7 141 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 SMLR1H3BR10 107 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 K7EMI3 77 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 ZNF861PO60384 105 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 CRYGAP11844 174 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 RAB4AP20338 218 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 CKS2P33552 79 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 CEBPGP53567 150 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 CKS1BP61024 79 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 TEX43Q6ZNM6 134 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 Q6ZUT4 128 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 PHF5AQ7RTV0 110 aaKnown RBP2.1□□□□□ -2.07
XRN1-209ENST00000472625 C5orf38Q86SI9 138 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 LINC01551Q86U37 167 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 AMN1Q8IY45 258 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 TCTE3Q8IZS6 198 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 SMIM2Q9BVW6 85 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 EIF5A2Q9GZV4 153 aaKnown RBP2.1□□□□□ -2.07
XRN1-209ENST00000472625 TP73-AS1Q9UF72 201 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 LAMTOR2Q9Y2Q5 125 aa2.1□□□□□ -2.07
XRN1-209ENST00000472625 LINC01549A6NIU2 74 aa2.09□□□□□ -2.07
XRN1-209ENST00000472625 ZNF727A8MUV8 499 aa2.09□□□□□ -2.07
XRN1-209ENST00000472625 FAM229BQ4G0N7 80 aa2.09□□□□□ -2.07
XRN1-209ENST00000472625 FAM104BQ5XKR9 115 aa2.09□□□□□ -2.07
XRN1-209ENST00000472625 ATP5L2Q7Z4Y8 100 aa2.09□□□□□ -2.07
XRN1-209ENST00000472625 Q8IZM0 81 aa2.09□□□□□ -2.07
XRN1-209ENST00000472625 ORMDL3Q8N138 153 aa2.09□□□□□ -2.07
XRN1-209ENST00000472625 TMEM141Q96I45 108 aa2.09□□□□□ -2.07
XRN1-209ENST00000472625 OPRPNQ99935 248 aaPredicted RBP2.09□□□□□ -2.07
XRN1-209ENST00000472625 MUC17Q685J3 4493 aa2.09□□□□□ -2.08
XRN1-209ENST00000472625 D6R8Y8 96 aa2.08□□□□□ -2.08
XRN1-209ENST00000472625 F8VRH5 84 aa2.08□□□□□ -2.08
XRN1-209ENST00000472625 BCE1O60756 84 aa2.08□□□□□ -2.08
XRN1-209ENST00000472625 KRTAP1-4P0C5Y4 121 aa2.08□□□□□ -2.08
XRN1-209ENST00000472625 SNRPEP62304 92 aaKnown RBP2.08□□□□□ -2.08
XRN1-209ENST00000472625 HERVK_113P63121 156 aa2.08□□□□□ -2.08
XRN1-209ENST00000472625 TPRXLQ17RH7 258 aa2.08□□□□□ -2.08
XRN1-209ENST00000472625 ORMDL2Q53FV1 153 aa2.08□□□□□ -2.08
XRN1-209ENST00000472625 RNASE13Q5GAN3 156 aaKnown RBP2.08□□□□□ -2.08
XRN1-209ENST00000472625 C6orf226Q5I0X4 101 aa2.08□□□□□ -2.08
XRN1-209ENST00000472625 SFTA2Q6UW10 78 aa2.08□□□□□ -2.08
XRN1-209ENST00000472625 TYMSOSQ8TAI1 123 aa2.08□□□□□ -2.08
XRN1-209ENST00000472625 C6orf48Q9UBA6 75 aa2.08□□□□□ -2.08
XRN1-209ENST00000472625 NAT8Q9UHE5 227 aa2.08□□□□□ -2.08
XRN1-209ENST00000472625 CYSLTR1Q9Y271 337 aa2.08□□□□□ -2.08
XRN1-209ENST00000472625 SMIM27A0A1W2PRY6 76 aa2.07□□□□□ -2.08
XRN1-209ENST00000472625 FAM168BA1KXE4 195 aa2.07□□□□□ -2.08
XRN1-209ENST00000472625 SMKR1H3BMG3 65 aa2.07□□□□□ -2.08
XRN1-209ENST00000472625 UBE2AP49459 152 aa2.07□□□□□ -2.08
XRN1-209ENST00000472625 DSCR10P59022 87 aa2.07□□□□□ -2.08
XRN1-209ENST00000472625 RPL39P62891 51 aaKnown RBP2.07□□□□□ -2.08
XRN1-209ENST00000472625 ADIRFQ15847 76 aa2.07□□□□□ -2.08
XRN1-209ENST00000472625 MRPL51Q4U2R6 128 aaKnown RBP2.07□□□□□ -2.08
XRN1-209ENST00000472625 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
XRN1-209ENST00000472625 UNQ6190/PRO20217Q6UXQ8 127 aa2.07□□□□□ -2.08
XRN1-209ENST00000472625 MRPL55Q7Z7F7 128 aaKnown RBP2.07□□□□□ -2.08
XRN1-209ENST00000472625 AKAP14Q86UN6 197 aa2.07□□□□□ -2.08
XRN1-209ENST00000472625 NKAPP1Q8N9T2 125 aa2.07□□□□□ -2.08
XRN1-209ENST00000472625 ALKBH7Q9BT30 221 aaPredicted RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms