RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 HBBP68871 147 aa5.38□□□□□ -1.55
VCL-204ENST00000472585 LINC00173Q6ZV60 143 aa5.38□□□□□ -1.55
VCL-204ENST00000472585 SMIM7Q9BQ49 75 aa5.38□□□□□ -1.55
VCL-204ENST00000472585 SMIM2Q9BVW6 85 aa5.38□□□□□ -1.55
VCL-204ENST00000472585 KRTAP4-1Q9BYQ7 146 aa5.38□□□□□ -1.55
VCL-204ENST00000472585 LINC00862A6NCI5 91 aa5.37□□□□□ -1.55
VCL-204ENST00000472585 PPP1R2P9O14990 202 aa5.37□□□□□ -1.55
VCL-204ENST00000472585 SRP19P09132 144 aaKnown RBP5.37□□□□□ -1.55
VCL-204ENST00000472585 CKS2P33552 79 aa5.37□□□□□ -1.55
VCL-204ENST00000472585 TGIF2-C20orf24A0A0A6YYL0 155 aa5.36□□□□□ -1.55
VCL-204ENST00000472585 SMIM27A0A1W2PRY6 76 aa5.36□□□□□ -1.55
VCL-204ENST00000472585 D6R8Y8 96 aa5.36□□□□□ -1.55
VCL-204ENST00000472585 NUPR1O60356 82 aa5.36□□□□□ -1.55
VCL-204ENST00000472585 BCE1O60756 84 aa5.36□□□□□ -1.55
VCL-204ENST00000472585 ATP6V1G1O75348 118 aa5.36□□□□□ -1.55
VCL-204ENST00000472585 FAM74A3Q4VXF1 159 aa5.36□□□□□ -1.55
VCL-204ENST00000472585 ALKAL2Q6UX46 152 aa5.36□□□□□ -1.55
VCL-204ENST00000472585 KRTAP13-1Q8IUC0 172 aa5.36□□□□□ -1.55
VCL-204ENST00000472585 NAT8BQ9UHF3 227 aa5.36□□□□□ -1.55
VCL-204ENST00000472585 RPL37AP8A6NKH3 93 aa5.35□□□□□ -1.55
VCL-204ENST00000472585 C9JQL5 133 aa5.35□□□□□ -1.55
VCL-204ENST00000472585 RPL23P62829 140 aaKnown RBP5.35□□□□□ -1.55
VCL-204ENST00000472585 IFITM2Q01629 132 aa5.35□□□□□ -1.55
VCL-204ENST00000472585 LINC00304Q8N9R0 145 aa5.35□□□□□ -1.55
VCL-204ENST00000472585 PACRGQ96M98 296 aaPredicted RBP5.35□□□□□ -1.55
VCL-204ENST00000472585 LINC00167Q96N53 147 aa5.35□□□□□ -1.55
VCL-204ENST00000472585 PPDPFQ9H3Y8 114 aa5.35□□□□□ -1.55
VCL-204ENST00000472585 PYGO1Q9Y3Y4 419 aa5.35□□□□□ -1.55
VCL-204ENST00000472585 RPL28P46779 137 aaKnown RBP5.34□□□□□ -1.55
VCL-204ENST00000472585 BLOC1S1P78537 153 aa5.34□□□□□ -1.55
VCL-204ENST00000472585 MRPL55Q7Z7F7 128 aaKnown RBP5.34□□□□□ -1.55
VCL-204ENST00000472585 LINC01561Q8N1V8 128 aa5.34□□□□□ -1.55
VCL-204ENST00000472585 LINC00337Q8N6G1 96 aa5.34□□□□□ -1.55
VCL-204ENST00000472585 A0A1B0GXF2 115 aa5.33□□□□□ -1.56
VCL-204ENST00000472585 LBHQ53QV2 105 aaPredicted RBP5.33□□□□□ -1.56
VCL-204ENST00000472585 AMELXQ99217 191 aa5.33□□□□□ -1.56
VCL-204ENST00000472585 EIF5A2Q9GZV4 153 aaKnown RBP5.33□□□□□ -1.56
VCL-204ENST00000472585 TOMM7Q9P0U1 55 aa5.33□□□□□ -1.56
VCL-204ENST00000472585 TP73-AS1Q9UF72 201 aa5.33□□□□□ -1.56
VCL-204ENST00000472585 GAGE10A6NGK3 116 aa5.32□□□□□ -1.56
VCL-204ENST00000472585 IFI27P40305 119 aaPredicted RBP5.32□□□□□ -1.56
VCL-204ENST00000472585 NDUFA5Q16718 116 aa5.32□□□□□ -1.56
VCL-204ENST00000472585 C6orf226Q5I0X4 101 aa5.32□□□□□ -1.56
VCL-204ENST00000472585 MRPL54Q6P161 138 aaKnown RBP5.32□□□□□ -1.56
VCL-204ENST00000472585 TMEM141Q96I45 108 aa5.32□□□□□ -1.56
VCL-204ENST00000472585 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
VCL-204ENST00000472585 SCO1O75880 301 aa5.31□□□□□ -1.56
VCL-204ENST00000472585 ASB16-AS1Q495Z4 193 aa5.31□□□□□ -1.56
VCL-204ENST00000472585 C2orf66Q6UXQ4 117 aa5.31□□□□□ -1.56
VCL-204ENST00000472585 Q6ZN92 141 aa5.31□□□□□ -1.56
VCL-204ENST00000472585 FAM19A3Q7Z5A8 133 aa5.31□□□□□ -1.56
VCL-204ENST00000472585 Q8IZM0 81 aa5.31□□□□□ -1.56
VCL-204ENST00000472585 CDKN2A-AS1Q9UH64 79 aa5.31□□□□□ -1.56
VCL-204ENST00000472585 PRSS47A8MTI9 375 aa5.3□□□□□ -1.56
VCL-204ENST00000472585 CKS1BP61024 79 aa5.3□□□□□ -1.56
VCL-204ENST00000472585 CTAG1AP78358 180 aa5.3□□□□□ -1.56
VCL-204ENST00000472585 FAM229BQ4G0N7 80 aa5.3□□□□□ -1.56
VCL-204ENST00000472585 TEX43Q6ZNM6 134 aa5.3□□□□□ -1.56
VCL-204ENST00000472585 TMEM136Q6ZRR5 245 aa5.3□□□□□ -1.56
VCL-204ENST00000472585 ALKBH7Q9BT30 221 aaPredicted RBP5.3□□□□□ -1.56
VCL-204ENST00000472585 IGKV2D-26A0A0A0MRZ7 120 aa5.29□□□□□ -1.56
VCL-204ENST00000472585 LOC389332A0A1B0GUA5 103 aa5.29□□□□□ -1.56
VCL-204ENST00000472585 A0A1B0GW15 77 aa5.29□□□□□ -1.56
VCL-204ENST00000472585 IGIPA6NJ69 53 aa5.29□□□□□ -1.56
VCL-204ENST00000472585 RAB5AP20339 215 aa5.29□□□□□ -1.56
VCL-204ENST00000472585 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
VCL-204ENST00000472585 ADIRFQ15847 76 aa5.29□□□□□ -1.56
VCL-204ENST00000472585 C3orf22Q8N5N4 141 aa5.29□□□□□ -1.56
VCL-204ENST00000472585 PRELID3AQ96N28 172 aa5.29□□□□□ -1.56
VCL-204ENST00000472585 IGLV5-37A0A075B6J1 123 aa5.28□□□□□ -1.56
VCL-204ENST00000472585 F8VRH5 84 aa5.28□□□□□ -1.56
VCL-204ENST00000472585 PPBPP02775 128 aa5.28□□□□□ -1.56
VCL-204ENST00000472585 PRSS2P07478 247 aa5.28□□□□□ -1.56
VCL-204ENST00000472585 PNRC1Q12796 327 aaPredicted RBP5.28□□□□□ -1.56
VCL-204ENST00000472585 ORMDL3Q8N138 153 aa5.28□□□□□ -1.56
VCL-204ENST00000472585 F8W036 122 aa5.27□□□□□ -1.57
VCL-204ENST00000472585 CFC1BP0CG36 223 aa5.27□□□□□ -1.57
VCL-204ENST00000472585 S100A1P23297 94 aa5.27□□□□□ -1.57
VCL-204ENST00000472585 PRLHP81277 87 aa5.27□□□□□ -1.57
VCL-204ENST00000472585 KRTAP13-3Q3SY46 172 aa5.27□□□□□ -1.57
VCL-204ENST00000472585 VCX2Q9H322 139 aa5.27□□□□□ -1.57
VCL-204ENST00000472585 IGKV2-28A0A075B6P5 120 aa5.26□□□□□ -1.57
VCL-204ENST00000472585 IGKV2D-28P01615 120 aa5.26□□□□□ -1.57
VCL-204ENST00000472585 RAB5BP61020 215 aa5.26□□□□□ -1.57
VCL-204ENST00000472585 FP248Q71RG6 208 aaPredicted RBP5.26□□□□□ -1.57
VCL-204ENST00000472585 SLC7A5P1Q8MH63 180 aa5.26□□□□□ -1.57
VCL-204ENST00000472585 PLEKHB2Q96CS7 222 aa5.26□□□□□ -1.57
VCL-204ENST00000472585 C2orf88Q9BSF0 95 aa5.26□□□□□ -1.57
VCL-204ENST00000472585 NAT8Q9UHE5 227 aa5.26□□□□□ -1.57
VCL-204ENST00000472585 SMIM1B2RUZ4 78 aa5.25□□□□□ -1.57
VCL-204ENST00000472585 TMEM238C9JI98 176 aa5.25□□□□□ -1.57
VCL-204ENST00000472585 UBE2AP49459 152 aa5.25□□□□□ -1.57
VCL-204ENST00000472585 Q8N8P6 123 aa5.25□□□□□ -1.57
VCL-204ENST00000472585 Q8NDZ9 215 aa5.25□□□□□ -1.57
VCL-204ENST00000472585 CYSLTR1Q9Y271 337 aa5.25□□□□□ -1.57
VCL-204ENST00000472585 HERVK_113P63121 156 aa5.24□□□□□ -1.57
VCL-204ENST00000472585 KRTAP19-2Q3LHN2 52 aa5.24□□□□□ -1.57
VCL-204ENST00000472585 M0R378 163 aa5.23□□□□□ -1.57
VCL-204ENST00000472585 S100A8P05109 93 aa5.23□□□□□ -1.57
VCL-204ENST00000472585 NPSP0C0P6 89 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms