RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 TRAV13-1A0A0B4J241 112 aa5.41□□□□□ -1.54
TSPAN1-205ENST00000472170 J3QL48 77 aa5.41□□□□□ -1.54
TSPAN1-205ENST00000472170 FOXI1Q12951 378 aa5.41□□□□□ -1.54
TSPAN1-205ENST00000472170 HIGD2BQ4VC39 106 aa5.41□□□□□ -1.54
TSPAN1-205ENST00000472170 SDIM1Q6ZPB5 146 aa5.41□□□□□ -1.54
TSPAN1-205ENST00000472170 C18orf32Q8TCD1 76 aa5.41□□□□□ -1.54
TSPAN1-205ENST00000472170 C7orf33Q8WU49 177 aa5.41□□□□□ -1.54
TSPAN1-205ENST00000472170 UBE2D4Q9Y2X8 147 aa5.41□□□□□ -1.54
TSPAN1-205ENST00000472170 HSPG2P98160 4391 aa5.41□□□□□ -1.54
TSPAN1-205ENST00000472170 A0A1B0GXF2 115 aa5.4□□□□□ -1.54
TSPAN1-205ENST00000472170 K7EMI3 77 aa5.4□□□□□ -1.54
TSPAN1-205ENST00000472170 ORMDL2Q53FV1 153 aa5.4□□□□□ -1.54
TSPAN1-205ENST00000472170 PAPPA-AS1Q5QFB9 102 aa5.4□□□□□ -1.54
TSPAN1-205ENST00000472170 LRP1BQ9NZR2 4599 aa5.4□□□□□ -1.55
TSPAN1-205ENST00000472170 LOC389332A0A1B0GUA5 103 aa5.39□□□□□ -1.55
TSPAN1-205ENST00000472170 NPYP01303 97 aa5.39□□□□□ -1.55
TSPAN1-205ENST00000472170 RPL37AP61513 92 aaKnown RBP5.39□□□□□ -1.55
TSPAN1-205ENST00000472170 COX6A2Q02221 97 aa5.39□□□□□ -1.55
TSPAN1-205ENST00000472170 SYCNQ0VAF6 134 aa5.39□□□□□ -1.55
TSPAN1-205ENST00000472170 CARD19Q96LW7 228 aa5.39□□□□□ -1.55
TSPAN1-205ENST00000472170 NXT2Q9NPJ8 142 aaKnown RBP5.39□□□□□ -1.55
TSPAN1-205ENST00000472170 ERG28Q9UKR5 140 aa5.39□□□□□ -1.55
TSPAN1-205ENST00000472170 F8WDY8 70 aa5.38□□□□□ -1.55
TSPAN1-205ENST00000472170 MRPS36P82909 103 aaKnown RBP5.38□□□□□ -1.55
TSPAN1-205ENST00000472170 Q8N8P6 123 aa5.38□□□□□ -1.55
TSPAN1-205ENST00000472170 C15orf56Q8N910 161 aa5.38□□□□□ -1.55
TSPAN1-205ENST00000472170 CAMK2N2Q96S95 79 aa5.38□□□□□ -1.55
TSPAN1-205ENST00000472170 CYSLTR1Q9Y271 337 aa5.38□□□□□ -1.55
TSPAN1-205ENST00000472170 DNAH5Q8TE73 4624 aa5.38□□□□□ -1.55
TSPAN1-205ENST00000472170 IGLV4-69A0A075B6H9 119 aa5.37□□□□□ -1.55
TSPAN1-205ENST00000472170 IGKV2-24A0A0C4DH68 120 aa5.37□□□□□ -1.55
TSPAN1-205ENST00000472170 A0A1W2PPM0 123 aa5.37□□□□□ -1.55
TSPAN1-205ENST00000472170 LINC01549A6NIU2 74 aa5.37□□□□□ -1.55
TSPAN1-205ENST00000472170 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.37□□□□□ -1.55
TSPAN1-205ENST00000472170 RPL39P62891 51 aaKnown RBP5.37□□□□□ -1.55
TSPAN1-205ENST00000472170 RNASE13Q5GAN3 156 aaKnown RBP5.37□□□□□ -1.55
TSPAN1-205ENST00000472170 C5orf38Q86SI9 138 aa5.37□□□□□ -1.55
TSPAN1-205ENST00000472170 PRSS3P2Q8NHM4 247 aa5.37□□□□□ -1.55
TSPAN1-205ENST00000472170 TMEM141Q96I45 108 aa5.37□□□□□ -1.55
TSPAN1-205ENST00000472170 VCX2Q9H322 139 aa5.37□□□□□ -1.55
TSPAN1-205ENST00000472170 PYGO1Q9Y3Y4 419 aa5.37□□□□□ -1.55
TSPAN1-205ENST00000472170 A0A087WYN8 130 aa5.36□□□□□ -1.55
TSPAN1-205ENST00000472170 LOC107984640A0A0U1RRK4 108 aa5.36□□□□□ -1.55
TSPAN1-205ENST00000472170 F8W1H4 67 aa5.36□□□□□ -1.55
TSPAN1-205ENST00000472170 SLPIP03973 132 aa5.36□□□□□ -1.55
TSPAN1-205ENST00000472170 COX8AP10176 69 aa5.36□□□□□ -1.55
TSPAN1-205ENST00000472170 FABP2P12104 132 aa5.36□□□□□ -1.55
TSPAN1-205ENST00000472170 RPL24P83731 157 aaKnown RBP5.36□□□□□ -1.55
TSPAN1-205ENST00000472170 Q6ZUT4 128 aa5.36□□□□□ -1.55
TSPAN1-205ENST00000472170 ERASQ7Z444 233 aa5.36□□□□□ -1.55
TSPAN1-205ENST00000472170 BOD1L2Q8IYS8 172 aa5.36□□□□□ -1.55
TSPAN1-205ENST00000472170 C2orf48Q96LS8 159 aa5.36□□□□□ -1.55
TSPAN1-205ENST00000472170 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.36□□□□□ -1.55
TSPAN1-205ENST00000472170 APOBP04114 4563 aaKnown RBP5.35□□□□□ -1.55
TSPAN1-205ENST00000472170 PRSS2P07478 247 aa5.35□□□□□ -1.55
TSPAN1-205ENST00000472170 HERV-K104P63124 156 aa5.35□□□□□ -1.55
TSPAN1-205ENST00000472170 SPAG11BQ08648 103 aa5.35□□□□□ -1.55
TSPAN1-205ENST00000472170 CIRBPQ14011 172 aaKnown RBP5.35□□□□□ -1.55
TSPAN1-205ENST00000472170 C2orf66Q6UXQ4 117 aa5.35□□□□□ -1.55
TSPAN1-205ENST00000472170 C2orf91Q6ZV80 131 aa5.35□□□□□ -1.55
TSPAN1-205ENST00000472170 SPACA4Q8TDM5 124 aa5.35□□□□□ -1.55
TSPAN1-205ENST00000472170 CHCHD1Q96BP2 118 aaKnown RBP5.35□□□□□ -1.55
TSPAN1-205ENST00000472170 SPANXB1Q9NS25 103 aaPredicted RBP5.35□□□□□ -1.55
TSPAN1-205ENST00000472170 SPCS1Q9Y6A9 102 aa5.35□□□□□ -1.55
TSPAN1-205ENST00000472170 NDUFA1O15239 70 aa5.34□□□□□ -1.55
TSPAN1-205ENST00000472170 HSBP1O75506 76 aa5.34□□□□□ -1.55
TSPAN1-205ENST00000472170 OXTP01178 125 aa5.34□□□□□ -1.55
TSPAN1-205ENST00000472170 GAGE2BQ13066 116 aa5.34□□□□□ -1.55
TSPAN1-205ENST00000472170 PLAC8Q9NZF1 115 aa5.34□□□□□ -1.55
TSPAN1-205ENST00000472170 SYS1-DBNDD2H3BUS1 97 aa5.33□□□□□ -1.56
TSPAN1-205ENST00000472170 CHTF8P0CG12 524 aa5.33□□□□□ -1.56
TSPAN1-205ENST00000472170 LINC00526Q96FQ7 95 aa5.33□□□□□ -1.56
TSPAN1-205ENST00000472170 OPRPNQ99935 248 aaPredicted RBP5.33□□□□□ -1.56
TSPAN1-205ENST00000472170 IGLV4-3A0A075B6K6 122 aa5.32□□□□□ -1.56
TSPAN1-205ENST00000472170 IGHV3OR16-9A0A0B4J2B5 98 aa5.32□□□□□ -1.56
TSPAN1-205ENST00000472170 KRTAP29-1A8MX34 341 aaPredicted RBP5.32□□□□□ -1.56
TSPAN1-205ENST00000472170 H3BUT2 72 aa5.32□□□□□ -1.56
TSPAN1-205ENST00000472170 HERVK_113P63121 156 aa5.32□□□□□ -1.56
TSPAN1-205ENST00000472170 RPL18AQ02543 176 aaKnown RBP5.32□□□□□ -1.56
TSPAN1-205ENST00000472170 KIAA1644Q3SXP7 199 aa5.32□□□□□ -1.56
TSPAN1-205ENST00000472170 LINC01545Q5VT33 79 aa5.32□□□□□ -1.56
TSPAN1-205ENST00000472170 Q6ZRU5 148 aa5.32□□□□□ -1.56
TSPAN1-205ENST00000472170 ATOH7Q8N100 152 aa5.32□□□□□ -1.56
TSPAN1-205ENST00000472170 LINC01561Q8N1V8 128 aa5.32□□□□□ -1.56
TSPAN1-205ENST00000472170 SCGB3A1Q96QR1 104 aa5.32□□□□□ -1.56
TSPAN1-205ENST00000472170 HSPB8Q9UJY1 196 aa5.32□□□□□ -1.56
TSPAN1-205ENST00000472170 FLG2Q5D862 2391 aaPredicted RBP5.31□□□□□ -1.56
TSPAN1-205ENST00000472170 A0A087WZ39 114 aa5.31□□□□□ -1.56
TSPAN1-205ENST00000472170 A0A096LNI7 61 aa5.31□□□□□ -1.56
TSPAN1-205ENST00000472170 C5orf47Q569G3 176 aa5.31□□□□□ -1.56
TSPAN1-205ENST00000472170 C4orf48Q5BLP8 95 aa5.31□□□□□ -1.56
TSPAN1-205ENST00000472170 C6orf226Q5I0X4 101 aa5.31□□□□□ -1.56
TSPAN1-205ENST00000472170 MRPL35Q9NZE8 188 aaKnown RBP5.31□□□□□ -1.56
TSPAN1-205ENST00000472170 HIGD1BQ9P298 99 aa5.31□□□□□ -1.56
TSPAN1-205ENST00000472170 SS18L2Q9UHA2 77 aa5.31□□□□□ -1.56
TSPAN1-205ENST00000472170 PANO1I0J062 215 aa5.3□□□□□ -1.56
TSPAN1-205ENST00000472170 LINC00242Q5T6M2 205 aa5.3□□□□□ -1.56
TSPAN1-205ENST00000472170 Q6Q795 121 aa5.3□□□□□ -1.56
TSPAN1-205ENST00000472170 Q6ZRP5 223 aa5.3□□□□□ -1.56
TSPAN1-205ENST00000472170 TOMM6Q96B49 74 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms