RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 CEP152O94986 1710 aa-2.54□□□□□ -2.82
PRPF40A-207ENST00000471701 MYH7P12883 1935 aa-2.55□□□□□ -2.82
PRPF40A-207ENST00000471701 SMG6Q86US8 1419 aaKnown RBP-2.55□□□□□ -2.82
PRPF40A-207ENST00000471701 COPS9Q8WXC6 57 aa-2.55□□□□□ -2.82
PRPF40A-207ENST00000471701 ANP32BQ92688 251 aaKnown RBP-2.55□□□□□ -2.82
PRPF40A-207ENST00000471701 SPANXDQ9BXN6 97 aa-2.55□□□□□ -2.82
PRPF40A-207ENST00000471701 RERGLQ9H628 205 aa-2.55□□□□□ -2.82
PRPF40A-207ENST00000471701 CDC42SE2Q9NRR3 84 aa-2.55□□□□□ -2.82
PRPF40A-207ENST00000471701 ANKRD11Q6UB99 2663 aaPredicted RBP-2.55□□□□□ -2.82
PRPF40A-207ENST00000471701 NLRP1Q9C000 1473 aa-2.56□□□□□ -2.82
PRPF40A-207ENST00000471701 TROQ12816 1431 aaPredicted RBP-2.56□□□□□ -2.82
PRPF40A-207ENST00000471701 LOC100130705A0A1B0GUX0 176 aa-2.56□□□□□ -2.82
PRPF40A-207ENST00000471701 H0YGG7 62 aa-2.56□□□□□ -2.82
PRPF40A-207ENST00000471701 WHAMMP3Q1A5X7 153 aa-2.56□□□□□ -2.82
PRPF40A-207ENST00000471701 PRO1933Q9H354 126 aa-2.56□□□□□ -2.82
PRPF40A-207ENST00000471701 TCHHQ07283 1943 aa-2.57□□□□□ -2.82
PRPF40A-207ENST00000471701 SMIM21Q3B7S5 101 aa-2.57□□□□□ -2.82
PRPF40A-207ENST00000471701 EHBP1L1Q8N3D4 1523 aa-2.58□□□□□ -2.82
PRPF40A-207ENST00000471701 MIF4GDA9UHW6 222 aaKnown RBP-2.58□□□□□ -2.82
PRPF40A-207ENST00000471701 SEC11AP67812 179 aa-2.58□□□□□ -2.82
PRPF40A-207ENST00000471701 PLEKHH2Q8IVE3 1493 aa-2.58□□□□□ -2.82
PRPF40A-207ENST00000471701 NUP188Q5SRE5 1749 aa-2.59□□□□□ -2.82
PRPF40A-207ENST00000471701 ROBO1Q9Y6N7 1651 aa-2.59□□□□□ -2.82
PRPF40A-207ENST00000471701 UBE2D3P61077 147 aa-2.59□□□□□ -2.82
PRPF40A-207ENST00000471701 UBE2D2P62837 147 aa-2.59□□□□□ -2.82
PRPF40A-207ENST00000471701 PYDC1Q8WXC3 89 aa-2.59□□□□□ -2.82
PRPF40A-207ENST00000471701 PPP3R2Q96LZ3 170 aa-2.59□□□□□ -2.82
PRPF40A-207ENST00000471701 UQCR10Q9UDW1 63 aa-2.59□□□□□ -2.82
PRPF40A-207ENST00000471701 PLECQ15149 4684 aaKnown RBP-2.6□□□□□ -2.83
PRPF40A-207ENST00000471701 LELP1Q5T871 98 aa-2.6□□□□□ -2.83
PRPF40A-207ENST00000471701 COMMD6Q7Z4G1 85 aa-2.6□□□□□ -2.83
PRPF40A-207ENST00000471701 CCDC141Q6ZP82 1450 aa-2.6□□□□□ -2.83
PRPF40A-207ENST00000471701 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.6□□□□□ -2.838e-8■□□□□ 8.9
PRPF40A-207ENST00000471701 I3L3M4 83 aa-2.61□□□□□ -2.83
PRPF40A-207ENST00000471701 ARPC4P59998 168 aa-2.61□□□□□ -2.83
PRPF40A-207ENST00000471701 DR1Q01658 176 aa-2.61□□□□□ -2.83
PRPF40A-207ENST00000471701 ADGRL2O95490 1459 aa-2.61□□□□□ -2.83
PRPF40A-207ENST00000471701 QRICH2Q9H0J4 1663 aa-2.61□□□□□ -2.83
PRPF40A-207ENST00000471701 PHLPP1O60346 1717 aa-2.62□□□□□ -2.83
PRPF40A-207ENST00000471701 SNRNP25Q9BV90 132 aaKnown RBP-2.62□□□□□ -2.83
PRPF40A-207ENST00000471701 H3BNG1 76 aa-2.63□□□□□ -2.83
PRPF40A-207ENST00000471701 C5orf38Q86SI9 138 aa-2.63□□□□□ -2.83
PRPF40A-207ENST00000471701 BTG2P78543 158 aa-2.64□□□□□ -2.83
PRPF40A-207ENST00000471701 CATR1Q13166 79 aa-2.64□□□□□ -2.83
PRPF40A-207ENST00000471701 NIPBLQ6KC79 2804 aaeCLIP-2.64□□□□□ -2.83
PRPF40A-207ENST00000471701 A0A1B0GU69 56 aa-2.65□□□□□ -2.83
PRPF40A-207ENST00000471701 FAM223BA6NKX1 122 aa-2.65□□□□□ -2.83
PRPF40A-207ENST00000471701 MEIG1Q5JSS6 88 aa-2.65□□□□□ -2.83
PRPF40A-207ENST00000471701 SFTA2Q6UW10 78 aa-2.65□□□□□ -2.83
PRPF40A-207ENST00000471701 PFDN5Q99471 154 aa-2.65□□□□□ -2.83
PRPF40A-207ENST00000471701 DNAH1Q9P2D7 4330 aa-2.65□□□□□ -2.83
PRPF40A-207ENST00000471701 COL14A1Q05707 1796 aaKnown RBP-2.65□□□□□ -2.83
PRPF40A-207ENST00000471701 A0A1B0GWA3 101 aa-2.66□□□□□ -2.84
PRPF40A-207ENST00000471701 WDR87Q6ZQQ6 2873 aa-2.66□□□□□ -2.84
PRPF40A-207ENST00000471701 LAMA3Q16787 3333 aa-2.67□□□□□ -2.84
PRPF40A-207ENST00000471701 Q56UQ5 140 aa-2.67□□□□□ -2.84
PRPF40A-207ENST00000471701 HEPN1Q6WQI6 88 aa-2.67□□□□□ -2.84
PRPF40A-207ENST00000471701 C8orf59Q8N0T1 100 aaPredicted RBP-2.67□□□□□ -2.84
PRPF40A-207ENST00000471701 RYR2Q92736 4967 aa-2.67□□□□□ -2.84
PRPF40A-207ENST00000471701 RNF213Q63HN8 5207 aa-2.67□□□□□ -2.84
PRPF40A-207ENST00000471701 FOCADQ5VW36 1801 aa-2.68□□□□□ -2.84
PRPF40A-207ENST00000471701 ARL11Q969Q4 196 aa-2.68□□□□□ -2.84
PRPF40A-207ENST00000471701 MRPL34Q9BQ48 92 aaKnown RBP-2.68□□□□□ -2.84
PRPF40A-207ENST00000471701 TEX15Q9BXT5 2789 aa-2.69□□□□□ -2.84
PRPF40A-207ENST00000471701 WFDC13Q8IUB5 93 aa-2.69□□□□□ -2.84
PRPF40A-207ENST00000471701 CICQ96RK0 1608 aaPredicted RBP-2.69□□□□□ -2.84
PRPF40A-207ENST00000471701 TOP2BQ02880 1626 aa-2.7□□□□□ -2.84
PRPF40A-207ENST00000471701 C9orf153Q5TBE3 101 aa-2.7□□□□□ -2.84
PRPF40A-207ENST00000471701 DIP2CQ9Y2E4 1556 aa-2.7□□□□□ -2.84
PRPF40A-207ENST00000471701 DNHD1Q96M86 4753 aa-2.7□□□□□ -2.84
PRPF40A-207ENST00000471701 MBD5Q9P267 1494 aa-2.71□□□□□ -2.84
PRPF40A-207ENST00000471701 MANBALQ9NQG1 85 aa-2.71□□□□□ -2.84
PRPF40A-207ENST00000471701 EDC4Q6P2E9 1401 aaKnown RBP-2.71□□□□□ -2.84
PRPF40A-207ENST00000471701 NCOA3Q9Y6Q9 1424 aa-2.71□□□□□ -2.84
PRPF40A-207ENST00000471701 TRAV30A0A087WSZ9 112 aa-2.72□□□□□ -2.84
PRPF40A-207ENST00000471701 FAM25AB3EWG3 89 aa-2.72□□□□□ -2.84
PRPF40A-207ENST00000471701 FAM25CB3EWG5 89 aa-2.72□□□□□ -2.84
PRPF40A-207ENST00000471701 FAM25GB3EWG6 89 aa-2.72□□□□□ -2.84
PRPF40A-207ENST00000471701 APOC2P02655 101 aa-2.72□□□□□ -2.84
PRPF40A-207ENST00000471701 PDCD11Q14690 1871 aaKnown RBP-2.72□□□□□ -2.84
PRPF40A-207ENST00000471701 C6orf201Q7Z4U5 140 aa-2.72□□□□□ -2.84
PRPF40A-207ENST00000471701 KIAA1551Q9HCM1 1747 aa-2.72□□□□□ -2.84
PRPF40A-207ENST00000471701 GCN1Q92616 2671 aaKnown RBP-2.72□□□□□ -2.85
PRPF40A-207ENST00000471701 MGAM2Q2M2H8 2515 aa-2.72□□□□□ -2.85
PRPF40A-207ENST00000471701 A0A0C4DFX4 3053 aa-2.73□□□□□ -2.85
PRPF40A-207ENST00000471701 GNG11P61952 73 aa-2.73□□□□□ -2.85
PRPF40A-207ENST00000471701 Q0VG73 95 aa-2.73□□□□□ -2.85
PRPF40A-207ENST00000471701 A0A087WVE0 104 aa-2.74□□□□□ -2.85
PRPF40A-207ENST00000471701 OOSP1A8MZH6 123 aa-2.74□□□□□ -2.85
PRPF40A-207ENST00000471701 GNG7O60262 68 aa-2.74□□□□□ -2.85
PRPF40A-207ENST00000471701 TRAPPC2P0DI81 140 aa-2.74□□□□□ -2.85
PRPF40A-207ENST00000471701 TRAPPC2BP0DI82 140 aa-2.74□□□□□ -2.85
PRPF40A-207ENST00000471701 SAA2P0DJI9 122 aaPredicted RBP-2.74□□□□□ -2.85
PRPF40A-207ENST00000471701 SNCAP37840 140 aa-2.74□□□□□ -2.85
PRPF40A-207ENST00000471701 LINC00846Q9NV44 126 aa-2.74□□□□□ -2.85
PRPF40A-207ENST00000471701 ACACAQ13085 2346 aa-2.74□□□□□ -2.85
PRPF40A-207ENST00000471701 LRRC37AA6NMS7 1700 aa-2.74□□□□□ -2.85
PRPF40A-207ENST00000471701 SACSQ9NZJ4 4579 aa-2.74□□□□□ -2.85
PRPF40A-207ENST00000471701 MRC2Q9UBG0 1479 aa-2.75□□□□□ -2.85
PRPF40A-207ENST00000471701 CCL22O00626 93 aa-2.75□□□□□ -2.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms