RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 TNRC6BQ9UPQ9 1833 aaKnown RBP1.98□□□□□ -2.09
SCN3A-207ENST00000471697 ODF3BA8MYP8 253 aa1.98□□□□□ -2.09
SCN3A-207ENST00000471697 M0R3E3 92 aa1.98□□□□□ -2.09
SCN3A-207ENST00000471697 ERHP84090 104 aaKnown RBP1.98□□□□□ -2.09
SCN3A-207ENST00000471697 ENHOQ6UWT2 76 aa1.98□□□□□ -2.09
SCN3A-207ENST00000471697 PRR15LQ9BU68 103 aa1.98□□□□□ -2.09
SCN3A-207ENST00000471697 MRPL36Q9P0J6 103 aaKnown RBP1.98□□□□□ -2.09
SCN3A-207ENST00000471697 IGKV3D-15A0A087WSY6 115 aa1.97□□□□□ -2.09
SCN3A-207ENST00000471697 IGKV3D-11A0A0A0MRZ8 115 aa1.97□□□□□ -2.09
SCN3A-207ENST00000471697 M0R135 149 aa1.97□□□□□ -2.09
SCN3A-207ENST00000471697 P0C880 135 aa1.97□□□□□ -2.09
SCN3A-207ENST00000471697 DEFB114Q30KQ6 69 aa1.97□□□□□ -2.09
SCN3A-207ENST00000471697 LINC00483Q53H64 154 aa1.97□□□□□ -2.09
SCN3A-207ENST00000471697 RPS27LQ71UM5 84 aaKnown RBP1.97□□□□□ -2.09
SCN3A-207ENST00000471697 C4orf3Q8WVX3 66 aa1.97□□□□□ -2.09
SCN3A-207ENST00000471697 DMAC1Q96GE9 116 aa1.97□□□□□ -2.09
SCN3A-207ENST00000471697 HIGD2AQ9BW72 106 aa1.97□□□□□ -2.09
SCN3A-207ENST00000471697 TIMM8BQ9Y5J9 83 aaPredicted RBP1.97□□□□□ -2.09
SCN3A-207ENST00000471697 R4GMQ9 66 aa1.97□□□□□ -2.09
SCN3A-207ENST00000471697 CPSF4LA6NMK7 179 aaKnown RBP1.96□□□□□ -2.1
SCN3A-207ENST00000471697 C10orf142B7Z368 130 aa1.96□□□□□ -2.1
SCN3A-207ENST00000471697 M0R1W7 72 aa1.96□□□□□ -2.1
SCN3A-207ENST00000471697 NDUFA3O95167 84 aa1.96□□□□□ -2.1
SCN3A-207ENST00000471697 IGKV3-11P04433 115 aa1.96□□□□□ -2.1
SCN3A-207ENST00000471697 CTSGP08311 255 aa1.96□□□□□ -2.1
SCN3A-207ENST00000471697 IL9P15248 144 aa1.96□□□□□ -2.1
SCN3A-207ENST00000471697 DEFB113Q30KQ7 82 aa1.96□□□□□ -2.1
SCN3A-207ENST00000471697 PCNTO95613 3336 aa1.95□□□□□ -2.1
SCN3A-207ENST00000471697 TRAV21A0A0B4J279 112 aa1.95□□□□□ -2.1
SCN3A-207ENST00000471697 LOC730098B7Z3J9 87 aa1.95□□□□□ -2.1
SCN3A-207ENST00000471697 PRB4P10163 310 aaPredicted RBP1.95□□□□□ -2.1
SCN3A-207ENST00000471697 NDPQ00604 133 aa1.95□□□□□ -2.1
SCN3A-207ENST00000471697 KRTAP26-1Q6PEX3 210 aa1.95□□□□□ -2.1
SCN3A-207ENST00000471697 SPINT4Q6UDR6 99 aa1.95□□□□□ -2.1
SCN3A-207ENST00000471697 Q8TAT8 98 aa1.95□□□□□ -2.1
SCN3A-207ENST00000471697 COX7B2Q8TF08 81 aa1.95□□□□□ -2.1
SCN3A-207ENST00000471697 ARHGAP5-AS1Q96IT6 56 aa1.95□□□□□ -2.1
SCN3A-207ENST00000471697 LINC00208Q96KT6 92 aa1.95□□□□□ -2.1
SCN3A-207ENST00000471697 PLAC8Q9NZF1 115 aa1.95□□□□□ -2.1
SCN3A-207ENST00000471697 COL4A1P02462 1669 aa1.95□□□□□ -2.1
SCN3A-207ENST00000471697 TNRC18O15417 2968 aaPredicted RBP1.94□□□□□ -2.1
SCN3A-207ENST00000471697 RP1P56715 2156 aa1.94□□□□□ -2.1
SCN3A-207ENST00000471697 LOC110117498A0A087WWA1 95 aa1.94□□□□□ -2.1
SCN3A-207ENST00000471697 A0A1W2PNM2 257 aa1.94□□□□□ -2.1
SCN3A-207ENST00000471697 UQCR11O14957 56 aa1.94□□□□□ -2.1
SCN3A-207ENST00000471697 MGPP08493 103 aa1.94□□□□□ -2.1
SCN3A-207ENST00000471697 ZNF137PP52743 207 aa1.94□□□□□ -2.1
SCN3A-207ENST00000471697 KRTAP10-1P60331 282 aa1.94□□□□□ -2.1
SCN3A-207ENST00000471697 LINC01590Q5TEZ4 76 aa1.94□□□□□ -2.1
SCN3A-207ENST00000471697 CSAG1Q6PB30 78 aa1.94□□□□□ -2.1
SCN3A-207ENST00000471697 ZCCHC13Q8WW36 166 aaKnown RBP1.94□□□□□ -2.1
SCN3A-207ENST00000471697 CNFNQ9BYD5 112 aa1.94□□□□□ -2.1
SCN3A-207ENST00000471697 PSORS1C2Q9UIG4 136 aa1.94□□□□□ -2.1
SCN3A-207ENST00000471697 A0A1W2PNU3 283 aaPredicted RBP1.93□□□□□ -2.1
SCN3A-207ENST00000471697 C9orf163Q8N9P6 203 aa1.93□□□□□ -2.1
SCN3A-207ENST00000471697 LINC00167Q96N53 147 aa1.93□□□□□ -2.1
SCN3A-207ENST00000471697 WFDC10AQ9H1F0 79 aa1.93□□□□□ -2.1
SCN3A-207ENST00000471697 PRO2289Q9P1D8 64 aa1.93□□□□□ -2.1
SCN3A-207ENST00000471697 R4GN34 69 aa1.93□□□□□ -2.1
SCN3A-207ENST00000471697 EP400Q96L91 3159 aa1.93□□□□□ -2.1
SCN3A-207ENST00000471697 PKD1L2Q7Z442 2459 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 CLPSL1A2RUU4 121 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 NUPR2A6NF83 97 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 A8MU10 97 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 H0Y9P7 68 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 IAPPP10997 89 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 FXYD4P59646 89 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 TFF3Q07654 80 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 LCE3EQ5T5B0 92 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 SPATA8Q6RVD6 105 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 LINC00322Q6ZN03 302 aaPredicted RBP1.92□□□□□ -2.1
SCN3A-207ENST00000471697 LYPD1Q8N2G4 141 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 WFDC9Q8NEX5 89 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 SMIM2Q9BVW6 85 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 UNC13CQ8NB66 2214 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 ZNF831Q5JPB2 1677 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 A0A0C4DFX4 3053 aa1.92□□□□□ -2.1
SCN3A-207ENST00000471697 ABCA4P78363 2273 aa1.91□□□□□ -2.1
SCN3A-207ENST00000471697 SHANK1Q9Y566 2161 aa1.91□□□□□ -2.1
SCN3A-207ENST00000471697 LRCOL1A6NCL2 159 aa1.91□□□□□ -2.1
SCN3A-207ENST00000471697 TFF1P04155 84 aa1.91□□□□□ -2.1
SCN3A-207ENST00000471697 GAFA1Q96PS6 74 aa1.91□□□□□ -2.1
SCN3A-207ENST00000471697 PRR34Q9NV39 138 aa1.91□□□□□ -2.1
SCN3A-207ENST00000471697 KLK9Q9UKQ9 250 aa1.91□□□□□ -2.1
SCN3A-207ENST00000471697 CUL9Q8IWT3 2517 aa1.91□□□□□ -2.1
SCN3A-207ENST00000471697 ADAMTS9Q9P2N4 1935 aa1.91□□□□□ -2.1
SCN3A-207ENST00000471697 ETDCA0A1B0GVM5 59 aa1.9□□□□□ -2.11
SCN3A-207ENST00000471697 IGLV3-19P01714 112 aa1.9□□□□□ -2.11
SCN3A-207ENST00000471697 CCL18P55774 89 aa1.9□□□□□ -2.11
SCN3A-207ENST00000471697 HAMPP81172 84 aa1.9□□□□□ -2.11
SCN3A-207ENST00000471697 HCP5Q6MZN7 132 aa1.9□□□□□ -2.11
SCN3A-207ENST00000471697 ZNF625Q96I27 306 aaPredicted RBP1.9□□□□□ -2.11
SCN3A-207ENST00000471697 SPRR4Q96PI1 79 aa1.9□□□□□ -2.11
SCN3A-207ENST00000471697 SEC16AO15027 2179 aa1.9□□□□□ -2.11
SCN3A-207ENST00000471697 TRGV4A0A0C4DH28 118 aa1.89□□□□□ -2.11
SCN3A-207ENST00000471697 IGKV1-17P01599 117 aa1.89□□□□□ -2.11
SCN3A-207ENST00000471697 CCL3L1P16619 93 aa1.89□□□□□ -2.11
SCN3A-207ENST00000471697 COX17Q14061 63 aa1.89□□□□□ -2.11
SCN3A-207ENST00000471697 LY6EQ16553 131 aa1.89□□□□□ -2.11
SCN3A-207ENST00000471697 FDCSPQ8NFU4 85 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms