RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 UBE2G1P62253 170 aa1.69□□□□□ -2.14
LRCH3-213ENST00000471667 MRPL52Q86TS9 123 aaKnown RBP1.69□□□□□ -2.14
LRCH3-213ENST00000471667 Q8NDZ9 215 aa1.69□□□□□ -2.14
LRCH3-213ENST00000471667 ZCCHC13Q8WW36 166 aaKnown RBP1.69□□□□□ -2.14
LRCH3-213ENST00000471667 SEC22CQ9BRL7 303 aa1.69□□□□□ -2.14
LRCH3-213ENST00000471667 EIF5A2Q9GZV4 153 aaKnown RBP1.69□□□□□ -2.14
LRCH3-213ENST00000471667 MCUBQ9NWR8 336 aa1.69□□□□□ -2.14
LRCH3-213ENST00000471667 ZFP30Q9Y2G7 519 aa1.69□□□□□ -2.14
LRCH3-213ENST00000471667 IGLV4-3A0A075B6K6 122 aa1.68□□□□□ -2.14
LRCH3-213ENST00000471667 MUC21A0A140T8X8 626 aa1.68□□□□□ -2.14
LRCH3-213ENST00000471667 SNAI2O43623 268 aa1.68□□□□□ -2.14
LRCH3-213ENST00000471667 IFNA1P01562 189 aa1.68□□□□□ -2.14
LRCH3-213ENST00000471667 SULT1A1P50225 295 aa1.68□□□□□ -2.14
LRCH3-213ENST00000471667 FOXA3P55318 350 aaPredicted RBP1.68□□□□□ -2.14
LRCH3-213ENST00000471667 DEFA3P59666 94 aa1.68□□□□□ -2.14
LRCH3-213ENST00000471667 MRPS10P82664 201 aaKnown RBP1.68□□□□□ -2.14
LRCH3-213ENST00000471667 LINC00483Q53H64 154 aa1.68□□□□□ -2.14
LRCH3-213ENST00000471667 C6orf226Q5I0X4 101 aa1.68□□□□□ -2.14
LRCH3-213ENST00000471667 TEX261Q6UWH6 196 aa1.68□□□□□ -2.14
LRCH3-213ENST00000471667 C2orf82Q6UX34 121 aa1.68□□□□□ -2.14
LRCH3-213ENST00000471667 TPPP3Q9BW30 176 aa1.68□□□□□ -2.14
LRCH3-213ENST00000471667 NKX6-2Q9C056 277 aaPredicted RBP1.68□□□□□ -2.14
LRCH3-213ENST00000471667 EPDR1Q9UM22 224 aa1.68□□□□□ -2.14
LRCH3-213ENST00000471667 C7orf66A4D0T2 115 aa1.67□□□□□ -2.14
LRCH3-213ENST00000471667 FAM25EA8MYX2 175 aa1.67□□□□□ -2.14
LRCH3-213ENST00000471667 TMEM238C9JI98 176 aa1.67□□□□□ -2.14
LRCH3-213ENST00000471667 SFT2D2O95562 160 aa1.67□□□□□ -2.14
LRCH3-213ENST00000471667 GNAO1P09471 354 aa1.67□□□□□ -2.14
LRCH3-213ENST00000471667 FAUP35544 74 aaKnown RBP1.67□□□□□ -2.14
LRCH3-213ENST00000471667 S100A12P80511 92 aa1.67□□□□□ -2.14
LRCH3-213ENST00000471667 HRCT1Q6UXD1 115 aa1.67□□□□□ -2.14
LRCH3-213ENST00000471667 SMIM15Q7Z3B0 74 aa1.67□□□□□ -2.14
LRCH3-213ENST00000471667 COX8CQ7Z4L0 72 aa1.67□□□□□ -2.14
LRCH3-213ENST00000471667 Q86TA4 180 aa1.67□□□□□ -2.14
LRCH3-213ENST00000471667 OCC1Q8TAD7 63 aa1.67□□□□□ -2.14
LRCH3-213ENST00000471667 LCE3DQ9BYE3 92 aa1.67□□□□□ -2.14
LRCH3-213ENST00000471667 OCR1Q9BZK8 76 aa1.67□□□□□ -2.14
LRCH3-213ENST00000471667 NUDT15Q9NV35 164 aa1.67□□□□□ -2.14
LRCH3-213ENST00000471667 CSDC2Q9Y534 153 aaKnown RBP1.67□□□□□ -2.14
LRCH3-213ENST00000471667 SDHAF1A6NFY7 115 aa1.66□□□□□ -2.14
LRCH3-213ENST00000471667 M0R378 163 aa1.66□□□□□ -2.14
LRCH3-213ENST00000471667 ATP5HO75947 161 aa1.66□□□□□ -2.14
LRCH3-213ENST00000471667 FCER1GP30273 86 aa1.66□□□□□ -2.14
LRCH3-213ENST00000471667 FHITP49789 147 aa1.66□□□□□ -2.14
LRCH3-213ENST00000471667 GNGT1P63211 74 aa1.66□□□□□ -2.14
LRCH3-213ENST00000471667 PP632Q6XCG6 107 aa1.66□□□□□ -2.14
LRCH3-213ENST00000471667 Q6ZVQ6 151 aa1.66□□□□□ -2.14
LRCH3-213ENST00000471667 MCFD2Q8NI22 146 aa1.66□□□□□ -2.14
LRCH3-213ENST00000471667 SMCR5Q8TEV8 140 aa1.66□□□□□ -2.14
LRCH3-213ENST00000471667 C11orf52Q96A22 123 aa1.66□□□□□ -2.14
LRCH3-213ENST00000471667 FMC1Q96HJ9 113 aa1.66□□□□□ -2.14
LRCH3-213ENST00000471667 TIMM21Q9BVV7 248 aa1.66□□□□□ -2.14
LRCH3-213ENST00000471667 TMEM167BQ9NRX6 74 aa1.66□□□□□ -2.14
LRCH3-213ENST00000471667 TOMM7Q9P0U1 55 aa1.66□□□□□ -2.14
LRCH3-213ENST00000471667 LSM5Q9Y4Y9 91 aaKnown RBP1.66□□□□□ -2.14
LRCH3-213ENST00000471667 IGHV3OR16-9A0A0B4J2B5 98 aa1.65□□□□□ -2.15
LRCH3-213ENST00000471667 LOC107984156A0A0G2JMH3 177 aa1.65□□□□□ -2.15
LRCH3-213ENST00000471667 A0A0G2JQZ4 141 aa1.65□□□□□ -2.15
LRCH3-213ENST00000471667 ETDCA0A1B0GVM5 59 aa1.65□□□□□ -2.15
LRCH3-213ENST00000471667 C5orf52A6NGY3 159 aa1.65□□□□□ -2.15
LRCH3-213ENST00000471667 F8VRH5 84 aa1.65□□□□□ -2.15
LRCH3-213ENST00000471667 CXCL5P42830 114 aa1.65□□□□□ -2.15
LRCH3-213ENST00000471667 MT4P47944 62 aa1.65□□□□□ -2.15
LRCH3-213ENST00000471667 NDUFV3P56181 108 aaKnown RBP1.65□□□□□ -2.15
LRCH3-213ENST00000471667 VBP1P61758 197 aa1.65□□□□□ -2.15
LRCH3-213ENST00000471667 HBBP68871 147 aa1.65□□□□□ -2.15
LRCH3-213ENST00000471667 RNASE13Q5GAN3 156 aaKnown RBP1.65□□□□□ -2.15
LRCH3-213ENST00000471667 SLC25A34Q6PIV7 304 aa1.65□□□□□ -2.15
LRCH3-213ENST00000471667 ARL17AQ8IVW1 177 aa1.65□□□□□ -2.15
LRCH3-213ENST00000471667 SCGB1C1Q8TD33 95 aa1.65□□□□□ -2.15
LRCH3-213ENST00000471667 HIST1H2BAQ96A08 127 aa1.65□□□□□ -2.15
LRCH3-213ENST00000471667 S100A14Q9HCY8 104 aa1.65□□□□□ -2.15
LRCH3-213ENST00000471667 CHTOPQ9Y3Y2 248 aaKnown RBP1.65□□□□□ -2.15
LRCH3-213ENST00000471667 XKRY2A2RUG3 117 aa1.64□□□□□ -2.15
LRCH3-213ENST00000471667 F2Z2F3 143 aa1.64□□□□□ -2.15
LRCH3-213ENST00000471667 PEX7O00628 323 aa1.64□□□□□ -2.15
LRCH3-213ENST00000471667 CRIP1P50238 77 aa1.64□□□□□ -2.15
LRCH3-213ENST00000471667 KIAA0087Q14695 138 aa1.64□□□□□ -2.15
LRCH3-213ENST00000471667 Q6ZN92 141 aa1.64□□□□□ -2.15
LRCH3-213ENST00000471667 PCP2Q8IVA1 136 aa1.64□□□□□ -2.15
LRCH3-213ENST00000471667 LINC01561Q8N1V8 128 aa1.64□□□□□ -2.15
LRCH3-213ENST00000471667 ST20Q9HBF5 79 aa1.64□□□□□ -2.15
LRCH3-213ENST00000471667 RAB26Q9ULW5 256 aa1.64□□□□□ -2.15
LRCH3-213ENST00000471667 TCL1BO95988 128 aa1.63□□□□□ -2.15
LRCH3-213ENST00000471667 ARL14EPLP0DKL9 152 aa1.63□□□□□ -2.15
LRCH3-213ENST00000471667 AQP4P55087 323 aa1.63□□□□□ -2.15
LRCH3-213ENST00000471667 AP3S2P59780 193 aa1.63□□□□□ -2.15
LRCH3-213ENST00000471667 PET117Q6UWS5 81 aa1.63□□□□□ -2.15
LRCH3-213ENST00000471667 Q6ZUT4 128 aa1.63□□□□□ -2.15
LRCH3-213ENST00000471667 Q8IZM0 81 aa1.63□□□□□ -2.15
LRCH3-213ENST00000471667 WDR61Q9GZS3 305 aaKnown RBP1.63□□□□□ -2.15
LRCH3-213ENST00000471667 TRAV9-1A0A075B6T8 112 aa1.62□□□□□ -2.15
LRCH3-213ENST00000471667 A0A1W2PRE2 83 aa1.62□□□□□ -2.15
LRCH3-213ENST00000471667 H7C2G1 150 aa1.62□□□□□ -2.15
LRCH3-213ENST00000471667 CXorf1O96002 111 aa1.62□□□□□ -2.15
LRCH3-213ENST00000471667 CDC34P49427 236 aaPredicted RBP1.62□□□□□ -2.15
LRCH3-213ENST00000471667 CD164Q04900 197 aa1.62□□□□□ -2.15
LRCH3-213ENST00000471667 TMUB2Q71RG4 321 aa1.62□□□□□ -2.15
LRCH3-213ENST00000471667 GATD1Q8NB37 220 aa1.62□□□□□ -2.15
LRCH3-213ENST00000471667 STOML3Q8TAV4 291 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms