RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 CHCHD7Q9BUK0 85 aa4.91□□□□□ -1.62
BRCA1-210ENST00000471181 C11orf1Q9H5F2 150 aa4.91□□□□□ -1.62
BRCA1-210ENST00000471181 Q6ZRU5 148 aa4.9□□□□□ -1.62
BRCA1-210ENST00000471181 PLXND1Q9Y4D7 1925 aa4.9□□□□□ -1.62
BRCA1-210ENST00000471181 KLLNB2CW77 178 aa4.9□□□□□ -1.62
BRCA1-210ENST00000471181 WISP2O76076 250 aa4.9□□□□□ -1.62
BRCA1-210ENST00000471181 SMR3AQ99954 134 aa4.9□□□□□ -1.62
BRCA1-210ENST00000471181 TSPEAR-AS2P59090 65 aa4.9□□□□□ -1.63
BRCA1-210ENST00000471181 PLCE1Q9P212 2302 aa4.9□□□□□ -1.63
BRCA1-210ENST00000471181 FAM229AH3BQW9 127 aa4.9□□□□□ -1.63
BRCA1-210ENST00000471181 Q8N2B8 174 aa4.9□□□□□ -1.63
BRCA1-210ENST00000471181 TCF20Q9UGU0 1960 aaKnown RBP4.9□□□□□ -1.63
BRCA1-210ENST00000471181 LINC01554Q52M75 96 aa4.9□□□□□ -1.63
BRCA1-210ENST00000471181 DMDP11532 3685 aa4.89□□□□□ -1.63
BRCA1-210ENST00000471181 DENND4CQ5VZ89 1909 aa4.89□□□□□ -1.63
BRCA1-210ENST00000471181 Q8NA96 180 aa4.89□□□□□ -1.63
BRCA1-210ENST00000471181 LINC01600Q96MT4 127 aa4.89□□□□□ -1.63
BRCA1-210ENST00000471181 IGIPA6NJ69 53 aa4.89□□□□□ -1.63
BRCA1-210ENST00000471181 ZNF580Q9UK33 172 aa4.89□□□□□ -1.63
BRCA1-210ENST00000471181 HELZP42694 1942 aaKnown RBP4.89□□□□□ -1.63
BRCA1-210ENST00000471181 WNK2Q9Y3S1 2297 aa4.89□□□□□ -1.63
BRCA1-210ENST00000471181 FBXL19-AS1Q494R0 122 aa4.89□□□□□ -1.63
BRCA1-210ENST00000471181 PCNX2A6NKB5 2137 aa4.89□□□□□ -1.63
BRCA1-210ENST00000471181 PTPRQQ9UMZ3 2332 aa4.89□□□□□ -1.63
BRCA1-210ENST00000471181 LAMA2P24043 3122 aaKnown RBP4.88□□□□□ -1.63
BRCA1-210ENST00000471181 FAM208BQ5VWN6 2430 aa4.88□□□□□ -1.63
BRCA1-210ENST00000471181 F8WDY8 70 aa4.88□□□□□ -1.63
BRCA1-210ENST00000471181 TYMSOSQ8TAI1 123 aa4.88□□□□□ -1.63
BRCA1-210ENST00000471181 FAM19A4Q96LR4 140 aa4.88□□□□□ -1.63
BRCA1-210ENST00000471181 TRAV22A0A0B4J277 110 aa4.88□□□□□ -1.63
BRCA1-210ENST00000471181 CHTF8P0CG12 524 aa4.88□□□□□ -1.63
BRCA1-210ENST00000471181 LYPD5Q6UWN5 251 aa4.88□□□□□ -1.63
BRCA1-210ENST00000471181 PCNX1Q96RV3 2341 aa4.88□□□□□ -1.63
BRCA1-210ENST00000471181 VWA8A3KMH1 1905 aa4.87□□□□□ -1.63
BRCA1-210ENST00000471181 BRWD1-AS2P59051 145 aa4.87□□□□□ -1.63
BRCA1-210ENST00000471181 RPL37AP61513 92 aaKnown RBP4.87□□□□□ -1.63
BRCA1-210ENST00000471181 C9orf129Q5T035 196 aaKnown RBP4.87□□□□□ -1.63
BRCA1-210ENST00000471181 EPM2AB3EWF7 344 aa4.87□□□□□ -1.63
BRCA1-210ENST00000471181 SPATA3Q8NHX4 192 aa4.87□□□□□ -1.63
BRCA1-210ENST00000471181 MUC22E2RYF6 1773 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-210ENST00000471181 ROS1P08922 2347 aa4.86□□□□□ -1.63
BRCA1-210ENST00000471181 EIF4EBP1Q13541 118 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-210ENST00000471181 TET1Q8NFU7 2136 aa4.86□□□□□ -1.63
BRCA1-210ENST00000471181 ZGRF1Q86YA3 2104 aa4.86□□□□□ -1.63
BRCA1-210ENST00000471181 CHD7Q9P2D1 2997 aa4.85□□□□□ -1.63
BRCA1-210ENST00000471181 LAMA3Q16787 3333 aa4.85□□□□□ -1.63
BRCA1-210ENST00000471181 IGLV1-40P01703 118 aa4.85□□□□□ -1.63
BRCA1-210ENST00000471181 LINC00574Q9H8X3 128 aa4.85□□□□□ -1.63
BRCA1-210ENST00000471181 ZFHX2Q9C0A1 2572 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-210ENST00000471181 ODF3L2Q3SX64 289 aa4.85□□□□□ -1.63
BRCA1-210ENST00000471181 ACACBO00763 2458 aa4.85□□□□□ -1.63
BRCA1-210ENST00000471181 IGLV6-57P01721 117 aa4.84□□□□□ -1.63
BRCA1-210ENST00000471181 ZNF295-AS1Q8N0V1 137 aa4.84□□□□□ -1.63
BRCA1-210ENST00000471181 A0A1W2PNU3 283 aaPredicted RBP4.84□□□□□ -1.64
BRCA1-210ENST00000471181 Q6ZSN1 163 aa4.84□□□□□ -1.64
BRCA1-210ENST00000471181 PHF5AQ7RTV0 110 aaKnown RBP4.83□□□□□ -1.64
BRCA1-210ENST00000471181 Q8NBF4 154 aa4.83□□□□□ -1.64
BRCA1-210ENST00000471181 C11orf71Q6IPW1 123 aa4.83□□□□□ -1.64
BRCA1-210ENST00000471181 LINC00167Q96N53 147 aa4.83□□□□□ -1.64
BRCA1-210ENST00000471181 LUZP6Q538Z0 58 aa4.83□□□□□ -1.64
BRCA1-210ENST00000471181 A0A0D9SG42 100 aa4.82□□□□□ -1.64
BRCA1-210ENST00000471181 MIR22HGQ0VDD5 57 aa4.82□□□□□ -1.64
BRCA1-210ENST00000471181 TNCP24821 2201 aa4.82□□□□□ -1.64
BRCA1-210ENST00000471181 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.82□□□□□ -1.643e-7■■■■■ 41.1
BRCA1-210ENST00000471181 C16orf90A8MZG2 172 aa4.82□□□□□ -1.64
BRCA1-210ENST00000471181 UQCR11O14957 56 aa4.82□□□□□ -1.64
BRCA1-210ENST00000471181 COA5Q86WW8 74 aa4.81□□□□□ -1.64
BRCA1-210ENST00000471181 LINC00476Q8WZB0 136 aa4.81□□□□□ -1.64
BRCA1-210ENST00000471181 AMELXQ99217 191 aa4.81□□□□□ -1.64
BRCA1-210ENST00000471181 ZNF106Q9H2Y7 1883 aaKnown RBP4.81□□□□□ -1.64
BRCA1-210ENST00000471181 NUP210Q8TEM1 1887 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-210ENST00000471181 PKDREJQ9NTG1 2253 aa4.81□□□□□ -1.64
BRCA1-210ENST00000471181 ARHGAP21Q5T5U3 1957 aa4.81□□□□□ -1.64
BRCA1-210ENST00000471181 CACNA1AO00555 2505 aa4.81□□□□□ -1.64
BRCA1-210ENST00000471181 NOTCH3Q9UM47 2321 aa4.81□□□□□ -1.64
BRCA1-210ENST00000471181 H3BPC8 53 aa4.81□□□□□ -1.64
BRCA1-210ENST00000471181 A8MUN3 132 aa4.81□□□□□ -1.64
BRCA1-210ENST00000471181 RTL8CO15255 209 aa4.81□□□□□ -1.64
BRCA1-210ENST00000471181 Q6ZQT0 140 aa4.81□□□□□ -1.64
BRCA1-210ENST00000471181 PIEZO1Q92508 2521 aa4.8□□□□□ -1.64
BRCA1-210ENST00000471181 IGLV1-51P01701 117 aa4.8□□□□□ -1.64
BRCA1-210ENST00000471181 Q6ZPA2 131 aa4.8□□□□□ -1.64
BRCA1-210ENST00000471181 CSNK1G2-AS1Q8NCQ2 148 aa4.8□□□□□ -1.64
BRCA1-210ENST00000471181 MALRD1Q5VYJ5 2156 aa4.8□□□□□ -1.64
BRCA1-210ENST00000471181 C9orf92A6NGG3 77 aa4.8□□□□□ -1.64
BRCA1-210ENST00000471181 C11orf72Q8NBR9 251 aa4.8□□□□□ -1.64
BRCA1-210ENST00000471181 CUL9Q8IWT3 2517 aa4.8□□□□□ -1.64
BRCA1-210ENST00000471181 TMEM131Q92545 1883 aa4.8□□□□□ -1.64
BRCA1-210ENST00000471181 PLXNA2O75051 1894 aa4.79□□□□□ -1.64
BRCA1-210ENST00000471181 A0A1B0GUV1 79 aa4.79□□□□□ -1.64
BRCA1-210ENST00000471181 LOC101927531A0A1B0GV80 90 aa4.79□□□□□ -1.64
BRCA1-210ENST00000471181 NHLRC4P0CG21 123 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-210ENST00000471181 MED13Q9UHV7 2174 aa4.79□□□□□ -1.64
BRCA1-210ENST00000471181 ANAPC1Q9H1A4 1944 aa4.79□□□□□ -1.64
BRCA1-210ENST00000471181 NOTCH4Q99466 2003 aa4.79□□□□□ -1.64
BRCA1-210ENST00000471181 ST20-AS1Q8NBB2 130 aa4.79□□□□□ -1.64
BRCA1-210ENST00000471181 TM2D3Q9BRN9 247 aa4.79□□□□□ -1.64
BRCA1-210ENST00000471181 MUC3AQ02505 3323 aa4.79□□□□□ -1.64
BRCA1-210ENST00000471181 FHL3Q13643 280 aa4.78□□□□□ -1.64
BRCA1-210ENST00000471181 Q6ZRP5 223 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms