RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 FAT3Q8TDW7 4589 aa5.91□□□□□ -1.46
SF3A1-206ENST00000471037 IGLV10-54A0A075B6I4 117 aa5.91□□□□□ -1.46
SF3A1-206ENST00000471037 IGHV3OR16-9A0A0B4J2B5 98 aa5.91□□□□□ -1.46
SF3A1-206ENST00000471037 H3BRM9 83 aa5.91□□□□□ -1.46
SF3A1-206ENST00000471037 XCL1P47992 114 aa5.91□□□□□ -1.46
SF3A1-206ENST00000471037 LINC01620Q4KN68 170 aa5.91□□□□□ -1.46
SF3A1-206ENST00000471037 PYY3Q5JQD4 70 aa5.91□□□□□ -1.46
SF3A1-206ENST00000471037 LINC00469Q8N7U9 141 aa5.91□□□□□ -1.46
SF3A1-206ENST00000471037 IGKV2D-24A0A075B6R9 120 aa5.9□□□□□ -1.46
SF3A1-206ENST00000471037 ZNF22P17026 224 aaPredicted RBP5.9□□□□□ -1.46
SF3A1-206ENST00000471037 COX6A2Q02221 97 aa5.9□□□□□ -1.46
SF3A1-206ENST00000471037 TMEM170BQ5T4T1 132 aa5.9□□□□□ -1.46
SF3A1-206ENST00000471037 LINC01561Q8N1V8 128 aa5.9□□□□□ -1.46
SF3A1-206ENST00000471037 CIRBP-AS1Q8TBR5 109 aa5.9□□□□□ -1.46
SF3A1-206ENST00000471037 UBR4Q5T4S7 5183 aa5.89□□□□□ -1.47
SF3A1-206ENST00000471037 A0A087WZ39 114 aa5.89□□□□□ -1.47
SF3A1-206ENST00000471037 GAGE12HA6NDE8 117 aa5.89□□□□□ -1.47
SF3A1-206ENST00000471037 COX7A2LO14548 114 aa5.89□□□□□ -1.47
SF3A1-206ENST00000471037 SMIM6P0DI80 62 aa5.89□□□□□ -1.47
SF3A1-206ENST00000471037 HERVK_113P61574 105 aa5.89□□□□□ -1.47
SF3A1-206ENST00000471037 FOXI1Q12951 378 aa5.89□□□□□ -1.47
SF3A1-206ENST00000471037 KRTAP26-1Q6PEX3 210 aa5.89□□□□□ -1.47
SF3A1-206ENST00000471037 CDKN2A-AS1Q9UH64 79 aa5.89□□□□□ -1.47
SF3A1-206ENST00000471037 TMEM223A0PJW6 202 aa5.88□□□□□ -1.47
SF3A1-206ENST00000471037 HSBP1L1C9JCN9 74 aa5.88□□□□□ -1.47
SF3A1-206ENST00000471037 C5orf38Q86SI9 138 aa5.88□□□□□ -1.47
SF3A1-206ENST00000471037 ATOH7Q8N100 152 aa5.88□□□□□ -1.47
SF3A1-206ENST00000471037 PLA2G2DQ9UNK4 145 aa5.88□□□□□ -1.47
SF3A1-206ENST00000471037 APOMO95445 188 aa5.87□□□□□ -1.47
SF3A1-206ENST00000471037 MALP21145 153 aa5.87□□□□□ -1.47
SF3A1-206ENST00000471037 IGHV1-58A0A0C4DH39 117 aa5.86□□□□□ -1.47
SF3A1-206ENST00000471037 hDV102S1A0JD36 115 aa5.86□□□□□ -1.47
SF3A1-206ENST00000471037 SMIM1B2RUZ4 78 aa5.86□□□□□ -1.47
SF3A1-206ENST00000471037 E9PLD3 99 aa5.86□□□□□ -1.47
SF3A1-206ENST00000471037 SPINK8P0C7L1 97 aa5.86□□□□□ -1.47
SF3A1-206ENST00000471037 CFAP161Q6P656 301 aa5.86□□□□□ -1.47
SF3A1-206ENST00000471037 STPG4Q8N801 248 aa5.86□□□□□ -1.47
SF3A1-206ENST00000471037 VAMP8Q9BV40 100 aa5.86□□□□□ -1.47
SF3A1-206ENST00000471037 IGHV3-64A0A075B6Q5 118 aa5.85□□□□□ -1.47
SF3A1-206ENST00000471037 IGLV5-39A0A0G2JS06 123 aa5.85□□□□□ -1.47
SF3A1-206ENST00000471037 S100A12P80511 92 aa5.85□□□□□ -1.47
SF3A1-206ENST00000471037 C14orf177Q52M58 125 aa5.85□□□□□ -1.47
SF3A1-206ENST00000471037 PLEKHB2Q96CS7 222 aa5.85□□□□□ -1.47
SF3A1-206ENST00000471037 PKHD1L1Q86WI1 4243 aa5.84□□□□□ -1.47
SF3A1-206ENST00000471037 LEPROTO15243 131 aa5.84□□□□□ -1.47
SF3A1-206ENST00000471037 RPL37AP61513 92 aaKnown RBP5.84□□□□□ -1.47
SF3A1-206ENST00000471037 MAJINQ3KP22 176 aa5.84□□□□□ -1.47
SF3A1-206ENST00000471037 ANKRD39Q53RE8 183 aa5.84□□□□□ -1.47
SF3A1-206ENST00000471037 ORAOV1Q8WV07 137 aa5.84□□□□□ -1.47
SF3A1-206ENST00000471037 PAM16Q9Y3D7 125 aa5.84□□□□□ -1.47
SF3A1-206ENST00000471037 GVQW2A0A096LPI5 108 aaPredicted RBP5.83□□□□□ -1.48
SF3A1-206ENST00000471037 PRSS2P07478 247 aa5.83□□□□□ -1.48
SF3A1-206ENST00000471037 LGALS3P17931 250 aaKnown RBP5.83□□□□□ -1.48
SF3A1-206ENST00000471037 HNRNPA3P51991 378 aaKnown RBP5.83□□□□□ -1.48
SF3A1-206ENST00000471037 SPAG11BQ08648 103 aa5.83□□□□□ -1.48
SF3A1-206ENST00000471037 SPATA45Q537H7 98 aa5.83□□□□□ -1.48
SF3A1-206ENST00000471037 Q8IZM0 81 aa5.83□□□□□ -1.48
SF3A1-206ENST00000471037 C15orf56Q8N910 161 aa5.83□□□□□ -1.48
SF3A1-206ENST00000471037 COX7B2Q8TF08 81 aa5.83□□□□□ -1.48
SF3A1-206ENST00000471037 IGKV2D-26A0A0A0MRZ7 120 aa5.82□□□□□ -1.48
SF3A1-206ENST00000471037 USP17L23D6RBM5 183 aa5.82□□□□□ -1.48
SF3A1-206ENST00000471037 F8WDY8 70 aa5.82□□□□□ -1.48
SF3A1-206ENST00000471037 J3QQQ9 107 aa5.82□□□□□ -1.48
SF3A1-206ENST00000471037 CXCL5P42830 114 aa5.82□□□□□ -1.48
SF3A1-206ENST00000471037 NMUP48645 174 aa5.82□□□□□ -1.48
SF3A1-206ENST00000471037 SFTA2Q6UW10 78 aa5.82□□□□□ -1.48
SF3A1-206ENST00000471037 C12orf57Q99622 126 aa5.82□□□□□ -1.48
SF3A1-206ENST00000471037 TOMM7Q9P0U1 55 aa5.82□□□□□ -1.48
SF3A1-206ENST00000471037 ZNF561-AS1K7EIQ3 104 aa5.81□□□□□ -1.48
SF3A1-206ENST00000471037 TSPEAR-AS2P59090 65 aa5.81□□□□□ -1.48
SF3A1-206ENST00000471037 KIAA0087Q14695 138 aa5.81□□□□□ -1.48
SF3A1-206ENST00000471037 C6orf226Q5I0X4 101 aa5.81□□□□□ -1.48
SF3A1-206ENST00000471037 LINC00518Q8N0U6 118 aa5.81□□□□□ -1.48
SF3A1-206ENST00000471037 C9orf163Q8N9P6 203 aa5.81□□□□□ -1.48
SF3A1-206ENST00000471037 MT1HL1P0DM35 61 aa5.8□□□□□ -1.48
SF3A1-206ENST00000471037 CKS1BP61024 79 aa5.8□□□□□ -1.48
SF3A1-206ENST00000471037 HIGD2BQ4VC39 106 aa5.8□□□□□ -1.48
SF3A1-206ENST00000471037 C2orf48Q96LS8 159 aa5.8□□□□□ -1.48
SF3A1-206ENST00000471037 NDUFA12Q9UI09 145 aa5.8□□□□□ -1.48
SF3A1-206ENST00000471037 MYMXA0A1B0GTQ4 84 aa5.79□□□□□ -1.48
SF3A1-206ENST00000471037 ZNF815PA8K554 130 aa5.79□□□□□ -1.48
SF3A1-206ENST00000471037 NDUFA1O15239 70 aa5.79□□□□□ -1.48
SF3A1-206ENST00000471037 COX8AP10176 69 aa5.79□□□□□ -1.48
SF3A1-206ENST00000471037 HERV-K104P63124 156 aa5.79□□□□□ -1.48
SF3A1-206ENST00000471037 ZNF625Q96I27 306 aaPredicted RBP5.79□□□□□ -1.48
SF3A1-206ENST00000471037 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.79□□□□□ -1.48
SF3A1-206ENST00000471037 DLEU1O43261 78 aa5.78□□□□□ -1.48
SF3A1-206ENST00000471037 CIRBPQ14011 172 aaKnown RBP5.78□□□□□ -1.48
SF3A1-206ENST00000471037 Q6ZRU5 148 aa5.78□□□□□ -1.48
SF3A1-206ENST00000471037 PCP2Q8IVA1 136 aa5.78□□□□□ -1.48
SF3A1-206ENST00000471037 CAMK2N2Q96S95 79 aa5.78□□□□□ -1.48
SF3A1-206ENST00000471037 LINC00587B1AMM8 73 aa5.77□□□□□ -1.49
SF3A1-206ENST00000471037 PANO1I0J062 215 aa5.77□□□□□ -1.49
SF3A1-206ENST00000471037 SYCNQ0VAF6 134 aa5.77□□□□□ -1.49
SF3A1-206ENST00000471037 SLC25A34Q6PIV7 304 aa5.77□□□□□ -1.49
SF3A1-206ENST00000471037 SDIM1Q6ZPB5 146 aa5.77□□□□□ -1.49
SF3A1-206ENST00000471037 BOD1L2Q8IYS8 172 aa5.77□□□□□ -1.49
SF3A1-206ENST00000471037 LINC00526Q96FQ7 95 aa5.77□□□□□ -1.49
SF3A1-206ENST00000471037 C14orf144Q96I85 54 aa5.77□□□□□ -1.49
SF3A1-206ENST00000471037 TTTY13Q9BZ97 58 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms