RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 Q6ZRU5 148 aa8.03□□□□□ -1.12
SRGAP3-204ENST00000470951 LINC00337Q8N6G1 96 aa8.03□□□□□ -1.12
SRGAP3-204ENST00000470951 MAP6D1Q9H9H5 199 aa8.03□□□□□ -1.12
SRGAP3-204ENST00000470951 SND1-IT1Q9HBX3 110 aa8.03□□□□□ -1.12
SRGAP3-204ENST00000470951 H7BZZ5 65 aa8.02□□□□□ -1.13
SRGAP3-204ENST00000470951 KRTAP10-9P60411 292 aa8.02□□□□□ -1.13
SRGAP3-204ENST00000470951 NTM-AS1Q6ZSK4 140 aa8.02□□□□□ -1.13
SRGAP3-204ENST00000470951 COX7B2Q8TF08 81 aa8.02□□□□□ -1.13
SRGAP3-204ENST00000470951 SETXQ7Z333 2677 aaKnown RBP8.01□□□□□ -1.13
SRGAP3-204ENST00000470951 IGKV2-28A0A075B6P5 120 aa8.01□□□□□ -1.13
SRGAP3-204ENST00000470951 IGKV2D-28P01615 120 aa8.01□□□□□ -1.13
SRGAP3-204ENST00000470951 PRR15Q8IV56 129 aa8.01□□□□□ -1.13
SRGAP3-204ENST00000470951 MIR7-3HGQ8N6C7 128 aa8.01□□□□□ -1.13
SRGAP3-204ENST00000470951 SMIM11BQ8TCY0 68 aa8.01□□□□□ -1.13
SRGAP3-204ENST00000470951 CSPG4Q6UVK1 2322 aa8□□□□□ -1.13
SRGAP3-204ENST00000470951 UBE2L6O14933 153 aa8□□□□□ -1.13
SRGAP3-204ENST00000470951 SLURP1P55000 103 aa8□□□□□ -1.13
SRGAP3-204ENST00000470951 DSCR9P59020 149 aa8□□□□□ -1.13
SRGAP3-204ENST00000470951 ZNF702PQ9H963 129 aa8□□□□□ -1.13
SRGAP3-204ENST00000470951 A0A087WYN8 130 aa8□□□□□ -1.13
SRGAP3-204ENST00000470951 XCL1P47992 114 aa8□□□□□ -1.13
SRGAP3-204ENST00000470951 LYPD5Q6UWN5 251 aa8□□□□□ -1.13
SRGAP3-204ENST00000470951 C14orf132Q9NPU4 83 aa8□□□□□ -1.13
SRGAP3-204ENST00000470951 XCL2Q9UBD3 114 aa8□□□□□ -1.13
SRGAP3-204ENST00000470951 VPS13CQ709C8 3753 aa7.99□□□□□ -1.13
SRGAP3-204ENST00000470951 CREBBPQ92793 2442 aa7.99□□□□□ -1.13
SRGAP3-204ENST00000470951 TRGV1A0A0A0MS02 117 aa7.99□□□□□ -1.13
SRGAP3-204ENST00000470951 IBA57-AS1B1ANH7 110 aa7.99□□□□□ -1.13
SRGAP3-204ENST00000470951 MDFIQ99750 246 aa7.99□□□□□ -1.13
SRGAP3-204ENST00000470951 NAV2Q8IVL1 2488 aa7.99□□□□□ -1.13
SRGAP3-204ENST00000470951 ANKRD17O75179 2603 aaKnown RBP7.99□□□□□ -1.13
SRGAP3-204ENST00000470951 ZFHX3Q15911 3703 aa7.99□□□□□ -1.13
SRGAP3-204ENST00000470951 DYNLRB2Q8TF09 96 aa7.98□□□□□ -1.13
SRGAP3-204ENST00000470951 LINC00846Q9NV44 126 aa7.98□□□□□ -1.13
SRGAP3-204ENST00000470951 CCDC168Q8NDH2 2452 aa7.98□□□□□ -1.13
SRGAP3-204ENST00000470951 S100A7L2Q5SY68 101 aa7.98□□□□□ -1.13
SRGAP3-204ENST00000470951 LAMTOR3Q9UHA4 124 aa7.98□□□□□ -1.13
SRGAP3-204ENST00000470951 CCL18P55774 89 aa7.97□□□□□ -1.13
SRGAP3-204ENST00000470951 LINC00158P58513 81 aa7.97□□□□□ -1.13
SRGAP3-204ENST00000470951 DEFB114Q30KQ6 69 aa7.97□□□□□ -1.13
SRGAP3-204ENST00000470951 ATP5EP2Q5VTU8 51 aa7.97□□□□□ -1.13
SRGAP3-204ENST00000470951 BCE1O60756 84 aa7.96□□□□□ -1.13
SRGAP3-204ENST00000470951 C4orf3Q8WVX3 66 aa7.96□□□□□ -1.13
SRGAP3-204ENST00000470951 A0A087WVE0 104 aa7.96□□□□□ -1.14
SRGAP3-204ENST00000470951 LECT2O14960 151 aa7.96□□□□□ -1.14
SRGAP3-204ENST00000470951 LY6G6DO95868 133 aa7.96□□□□□ -1.14
SRGAP3-204ENST00000470951 CCKP06307 115 aa7.96□□□□□ -1.14
SRGAP3-204ENST00000470951 ATP5EP56381 51 aaPredicted RBP7.96□□□□□ -1.14
SRGAP3-204ENST00000470951 C9orf129Q5T035 196 aaKnown RBP7.96□□□□□ -1.14
SRGAP3-204ENST00000470951 Q6YL49 198 aa7.96□□□□□ -1.14
SRGAP3-204ENST00000470951 ORMDL1Q9P0S3 153 aa7.96□□□□□ -1.14
SRGAP3-204ENST00000470951 IGKV3D-7A0A0C4DH55 119 aa7.95□□□□□ -1.14
SRGAP3-204ENST00000470951 TRBV7-6A0A0J9YX20 115 aa7.95□□□□□ -1.14
SRGAP3-204ENST00000470951 KLKP1Q107X0 134 aa7.95□□□□□ -1.14
SRGAP3-204ENST00000470951 DEFB136Q30KP8 78 aa7.95□□□□□ -1.14
SRGAP3-204ENST00000470951 C11orf45Q8TAV5 145 aa7.95□□□□□ -1.14
SRGAP3-204ENST00000470951 C20orf197Q8N268 126 aa7.95□□□□□ -1.14
SRGAP3-204ENST00000470951 PDZD2O15018 2839 aa7.94□□□□□ -1.14
SRGAP3-204ENST00000470951 IGHV3OR16-9A0A0B4J2B5 98 aa7.94□□□□□ -1.14
SRGAP3-204ENST00000470951 TRBV6-4A0A1B0GX49 114 aa7.94□□□□□ -1.14
SRGAP3-204ENST00000470951 JMJD7-PLA2G4BH0Y9G9 81 aa7.94□□□□□ -1.14
SRGAP3-204ENST00000470951 HILS1P60008 231 aa7.94□□□□□ -1.14
SRGAP3-204ENST00000470951 Q6ZTI0 123 aa7.94□□□□□ -1.14
SRGAP3-204ENST00000470951 FAM30AQ9NZY2 134 aa7.94□□□□□ -1.14
SRGAP3-204ENST00000470951 TOMM7Q9P0U1 55 aa7.94□□□□□ -1.14
SRGAP3-204ENST00000470951 LINC00474Q9P2X8 69 aa7.94□□□□□ -1.14
SRGAP3-204ENST00000470951 A0A087WZ39 114 aa7.94□□□□□ -1.14
SRGAP3-204ENST00000470951 LINC00167Q96N53 147 aa7.94□□□□□ -1.14
SRGAP3-204ENST00000470951 CELSR1Q9NYQ6 3014 aa7.93□□□□□ -1.14
SRGAP3-204ENST00000470951 PLAC8L1A1L4L8 177 aa7.93□□□□□ -1.14
SRGAP3-204ENST00000470951 SS18Q15532 418 aa7.93□□□□□ -1.14
SRGAP3-204ENST00000470951 ODF3L2Q3SX64 289 aa7.93□□□□□ -1.14
SRGAP3-204ENST00000470951 C18orf65Q6ZTR6 163 aa7.93□□□□□ -1.14
SRGAP3-204ENST00000470951 NCR3O14931 201 aa7.92□□□□□ -1.14
SRGAP3-204ENST00000470951 FSHBP01225 129 aa7.92□□□□□ -1.14
SRGAP3-204ENST00000470951 PLA2G2DQ9UNK4 145 aa7.92□□□□□ -1.14
SRGAP3-204ENST00000470951 PAX4O43316 350 aa7.92□□□□□ -1.14
SRGAP3-204ENST00000470951 MYO9AB2RTY4 2548 aa7.91□□□□□ -1.14
SRGAP3-204ENST00000470951 TRBV10-3A0A0K0K1G6 114 aa7.91□□□□□ -1.14
SRGAP3-204ENST00000470951 TEX15Q9BXT5 2789 aa7.91□□□□□ -1.14
SRGAP3-204ENST00000470951 CYSRT1A8MQ03 144 aa7.9□□□□□ -1.15
SRGAP3-204ENST00000470951 TMEM256-PLSCR3K7ERE1 68 aa7.9□□□□□ -1.15
SRGAP3-204ENST00000470951 C16orf74Q96GX8 76 aa7.9□□□□□ -1.15
SRGAP3-204ENST00000470951 A0A096LNT2 108 aa7.89□□□□□ -1.15
SRGAP3-204ENST00000470951 NOP10Q9NPE3 64 aaKnown RBP7.89□□□□□ -1.15
SRGAP3-204ENST00000470951 TRBV6-8A0A0A6YYG3 113 aa7.89□□□□□ -1.15
SRGAP3-204ENST00000470951 NDUFC1O43677 76 aa7.89□□□□□ -1.15
SRGAP3-204ENST00000470951 ZNF469Q96JG9 3925 aaPredicted RBP7.88□□□□□ -1.15
SRGAP3-204ENST00000470951 TRAV7A0A075B6U4 112 aa7.88□□□□□ -1.15
SRGAP3-204ENST00000470951 CMC4P56277 68 aaPredicted RBP7.88□□□□□ -1.15
SRGAP3-204ENST00000470951 IGLV4-60A0A075B6I1 120 aa7.87□□□□□ -1.15
SRGAP3-204ENST00000470951 TRGV2A0A075B6R0 118 aa7.87□□□□□ -1.15
SRGAP3-204ENST00000470951 SLPIP03973 132 aa7.87□□□□□ -1.15
SRGAP3-204ENST00000470951 Q8IZM0 81 aa7.87□□□□□ -1.15
SRGAP3-204ENST00000470951 Q8N814 137 aa7.87□□□□□ -1.15
SRGAP3-204ENST00000470951 ITPR3Q14573 2671 aa7.87□□□□□ -1.15
SRGAP3-204ENST00000470951 IGKV3OR2-268A0A0C4DH90 116 aa7.86□□□□□ -1.15
SRGAP3-204ENST00000470951 RBM3P98179 157 aaKnown RBP7.86□□□□□ -1.15
SRGAP3-204ENST00000470951 DEFB113Q30KQ7 82 aa7.86□□□□□ -1.15
SRGAP3-204ENST00000470951 AKAP9Q99996 3911 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms