RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 C2orf48Q96LS8 159 aa18.77■□□□□ 0.59
SOD1-203ENST00000470944 CAMK2N2Q96S95 79 aa18.77■□□□□ 0.59
SOD1-203ENST00000470944 A0A1B0GVY2 172 aa18.76■□□□□ 0.59
SOD1-203ENST00000470944 LEPROTO15243 131 aa18.75■□□□□ 0.59
SOD1-203ENST00000470944 CDPF1Q6NVV7 123 aa18.75■□□□□ 0.59
SOD1-203ENST00000470944 UNQ6190/PRO20217Q6UXQ8 127 aa18.75■□□□□ 0.59
SOD1-203ENST00000470944 Q6ZRU5 148 aa18.75■□□□□ 0.59
SOD1-203ENST00000470944 PCP4L1A6NKN8 68 aa18.74■□□□□ 0.59
SOD1-203ENST00000470944 CNBPP62633 177 aaKnown RBP18.74■□□□□ 0.59
SOD1-203ENST00000470944 CKS1BP61024 79 aa18.74■□□□□ 0.59
SOD1-203ENST00000470944 DNAH5Q8TE73 4624 aa18.73■□□□□ 0.59
SOD1-203ENST00000470944 SYCNQ0VAF6 134 aa18.73■□□□□ 0.59
SOD1-203ENST00000470944 J3QQQ9 107 aa18.72■□□□□ 0.59
SOD1-203ENST00000470944 PLEKHB2Q96CS7 222 aa18.71■□□□□ 0.59
SOD1-203ENST00000470944 NDUFA1O15239 70 aa18.71■□□□□ 0.59
SOD1-203ENST00000470944 LINC01620Q4KN68 170 aa18.71■□□□□ 0.59
SOD1-203ENST00000470944 CARD19Q96LW7 228 aa18.7■□□□□ 0.58
SOD1-203ENST00000470944 ZNF625Q96I27 306 aaPredicted RBP18.69■□□□□ 0.58
SOD1-203ENST00000470944 IGLV5-52A0A0A0MRZ9 124 aa18.69■□□□□ 0.58
SOD1-203ENST00000470944 CXCL5P42830 114 aa18.69■□□□□ 0.58
SOD1-203ENST00000470944 TTTY13Q9BZ97 58 aa18.69■□□□□ 0.58
SOD1-203ENST00000470944 C6orf48Q9UBA6 75 aa18.69■□□□□ 0.58
SOD1-203ENST00000470944 HSBP1L1C9JCN9 74 aa18.68■□□□□ 0.58
SOD1-203ENST00000470944 PKHD1P08F94 4074 aa18.67■□□□□ 0.58
SOD1-203ENST00000470944 F8WDY8 70 aa18.67■□□□□ 0.58
SOD1-203ENST00000470944 LGALS3P17931 250 aaKnown RBP18.67■□□□□ 0.58
SOD1-203ENST00000470944 NMUP48645 174 aa18.67■□□□□ 0.58
SOD1-203ENST00000470944 NDUFA12Q9UI09 145 aa18.67■□□□□ 0.58
SOD1-203ENST00000470944 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.66■□□□□ 0.58
SOD1-203ENST00000470944 C9orf116Q5BN46 136 aaPredicted RBP18.66■□□□□ 0.58
SOD1-203ENST00000470944 PGPEP1Q9NXJ5 209 aa18.66■□□□□ 0.58
SOD1-203ENST00000470944 C9orf163Q8N9P6 203 aa18.65■□□□□ 0.58
SOD1-203ENST00000470944 PAM16Q9Y3D7 125 aa18.64■□□□□ 0.57
SOD1-203ENST00000470944 VAMP8Q9BV40 100 aa18.63■□□□□ 0.57
SOD1-203ENST00000470944 PCP2Q8IVA1 136 aa18.63■□□□□ 0.57
SOD1-203ENST00000470944 TRBV30A0A0K0K1B3 111 aa18.61■□□□□ 0.57
SOD1-203ENST00000470944 MYMXA0A1B0GTQ4 84 aa18.59■□□□□ 0.57
SOD1-203ENST00000470944 SPATA45Q537H7 98 aa18.59■□□□□ 0.57
SOD1-203ENST00000470944 RNF151Q2KHN1 245 aa18.58■□□□□ 0.57
SOD1-203ENST00000470944 SFTA2Q6UW10 78 aa18.57■□□□□ 0.56
SOD1-203ENST00000470944 ZNF815PA8K554 130 aa18.57■□□□□ 0.56
SOD1-203ENST00000470944 SDIM1Q6ZPB5 146 aa18.55■□□□□ 0.56
SOD1-203ENST00000470944 TP73-AS1Q9UF72 201 aa18.55■□□□□ 0.56
SOD1-203ENST00000470944 HERV-K104P63124 156 aa18.54■□□□□ 0.56
SOD1-203ENST00000470944 GCSHP23434 173 aa18.54■□□□□ 0.56
SOD1-203ENST00000470944 PFN2P35080 140 aa18.54■□□□□ 0.56
SOD1-203ENST00000470944 ERG28Q9UKR5 140 aa18.54■□□□□ 0.56
SOD1-203ENST00000470944 DYNC1H1Q14204 4646 aaKnown RBP18.53■□□□□ 0.56
SOD1-203ENST00000470944 EPPK1P58107 5090 aaKnown RBP18.53■□□□□ 0.56
SOD1-203ENST00000470944 A0A0J9YXY3 114 aa18.52■□□□□ 0.55
SOD1-203ENST00000470944 A0A0U1RRA0 63 aa18.52■□□□□ 0.55
SOD1-203ENST00000470944 KRTAP10-1P60331 282 aa18.52■□□□□ 0.55
SOD1-203ENST00000470944 Q6ZRP5 223 aa18.52■□□□□ 0.55
SOD1-203ENST00000470944 LRP1BQ9NZR2 4599 aa18.51■□□□□ 0.55
SOD1-203ENST00000470944 LINC00587B1AMM8 73 aa18.51■□□□□ 0.55
SOD1-203ENST00000470944 C14orf144Q96I85 54 aa18.51■□□□□ 0.55
SOD1-203ENST00000470944 NDUFC2-KCTD14E9PQ53 114 aa18.5■□□□□ 0.55
SOD1-203ENST00000470944 RPL18AQ02543 176 aaKnown RBP18.5■□□□□ 0.55
SOD1-203ENST00000470944 C16orf90A8MZG2 172 aa18.49■□□□□ 0.55
SOD1-203ENST00000470944 SMIM13P0DJ93 91 aa18.49■□□□□ 0.55
SOD1-203ENST00000470944 MEIG1Q5JSS6 88 aa18.49■□□□□ 0.55
SOD1-203ENST00000470944 LOC107984640A0A0U1RRK4 108 aa18.49■□□□□ 0.55
SOD1-203ENST00000470944 TLX1NBP0CAT3 122 aa18.49■□□□□ 0.55
SOD1-203ENST00000470944 A0A096LNI7 61 aa18.48■□□□□ 0.55
SOD1-203ENST00000470944 TSTD3H0UI37 97 aa18.48■□□□□ 0.55
SOD1-203ENST00000470944 COX8AP10176 69 aa18.48■□□□□ 0.55
SOD1-203ENST00000470944 CHTF8P0CG12 524 aa18.47■□□□□ 0.55
SOD1-203ENST00000470944 PANO1I0J062 215 aa18.46■□□□□ 0.55
SOD1-203ENST00000470944 GAGE2BQ13066 116 aa18.46■□□□□ 0.55
SOD1-203ENST00000470944 GAGE2EQ4V326 116 aa18.46■□□□□ 0.55
SOD1-203ENST00000470944 GAGE2DQ9UEU5 116 aa18.46■□□□□ 0.55
SOD1-203ENST00000470944 LINC00158P58513 81 aa18.46■□□□□ 0.55
SOD1-203ENST00000470944 BOD1L2Q8IYS8 172 aa18.46■□□□□ 0.55
SOD1-203ENST00000470944 IGKV2-24A0A0C4DH68 120 aa18.45■□□□□ 0.54
SOD1-203ENST00000470944 COX17Q14061 63 aa18.45■□□□□ 0.54
SOD1-203ENST00000470944 PTTG1IPP53801 180 aa18.43■□□□□ 0.54
SOD1-203ENST00000470944 SCGB1D4Q6XE38 83 aa18.43■□□□□ 0.54
SOD1-203ENST00000470944 DAND5Q8N907 189 aa18.43■□□□□ 0.54
SOD1-203ENST00000470944 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP18.43■□□□□ 0.54
SOD1-203ENST00000470944 DNAH8Q96JB1 4490 aa18.43■□□□□ 0.54
SOD1-203ENST00000470944 ADAMTSL4-AS1Q5T5F5 129 aa18.43■□□□□ 0.54
SOD1-203ENST00000470944 LITAFQ99732 161 aa18.43■□□□□ 0.54
SOD1-203ENST00000470944 XAGE1AQ9HD64 81 aa18.42■□□□□ 0.54
SOD1-203ENST00000470944 FAM30AQ9NZY2 134 aa18.42■□□□□ 0.54
SOD1-203ENST00000470944 MIR7-3HGQ8N6C7 128 aa18.4■□□□□ 0.54
SOD1-203ENST00000470944 DLEU1O43261 78 aa18.39■□□□□ 0.53
SOD1-203ENST00000470944 C9orf129Q5T035 196 aaKnown RBP18.38■□□□□ 0.53
SOD1-203ENST00000470944 SND1-IT1Q9HBX3 110 aa18.38■□□□□ 0.53
SOD1-203ENST00000470944 PKIGQ9Y2B9 76 aa18.38■□□□□ 0.53
SOD1-203ENST00000470944 DDTP30046 118 aa18.37■□□□□ 0.53
SOD1-203ENST00000470944 SLC25A34Q6PIV7 304 aa18.37■□□□□ 0.53
SOD1-203ENST00000470944 PRO1933Q9H354 126 aa18.37■□□□□ 0.53
SOD1-203ENST00000470944 CIRBPQ14011 172 aaKnown RBP18.37■□□□□ 0.53
SOD1-203ENST00000470944 TIMM17BO60830 172 aa18.36■□□□□ 0.53
SOD1-203ENST00000470944 SPACA4Q8TDM5 124 aa18.36■□□□□ 0.53
SOD1-203ENST00000470944 Q6ZSA8 131 aa18.35■□□□□ 0.53
SOD1-203ENST00000470944 CTAG1AP78358 180 aa18.35■□□□□ 0.53
SOD1-203ENST00000470944 FAM168BA1KXE4 195 aa18.32■□□□□ 0.52
SOD1-203ENST00000470944 EIF4EBP3O60516 100 aaPredicted RBP18.32■□□□□ 0.52
SOD1-203ENST00000470944 NPC2P61916 151 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms