RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 C2orf48Q96LS8 159 aa6.47□□□□□ -1.37
CCM2-204ENST00000470837 DNAH7Q8WXX0 4024 aa6.47□□□□□ -1.37
CCM2-204ENST00000470837 CSMD3Q7Z407 3707 aa6.46□□□□□ -1.37
CCM2-204ENST00000470837 A0A0J9YXY3 114 aa6.46□□□□□ -1.38
CCM2-204ENST00000470837 DDTP30046 118 aa6.46□□□□□ -1.38
CCM2-204ENST00000470837 LINC00158P58513 81 aa6.46□□□□□ -1.38
CCM2-204ENST00000470837 KIAA0087Q14695 138 aa6.46□□□□□ -1.38
CCM2-204ENST00000470837 C2orf82Q6UX34 121 aa6.46□□□□□ -1.38
CCM2-204ENST00000470837 NTN5Q8WTR8 489 aaPredicted RBP6.46□□□□□ -1.38
CCM2-204ENST00000470837 COPS9Q8WXC6 57 aa6.46□□□□□ -1.38
CCM2-204ENST00000470837 DYNC2H1Q8NCM8 4307 aaKnown RBP6.45□□□□□ -1.38
CCM2-204ENST00000470837 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.45□□□□□ -1.38
CCM2-204ENST00000470837 LCE6AA0A183 80 aa6.45□□□□□ -1.38
CCM2-204ENST00000470837 TIMM17BO60830 172 aa6.45□□□□□ -1.38
CCM2-204ENST00000470837 SYCNQ0VAF6 134 aa6.45□□□□□ -1.38
CCM2-204ENST00000470837 LINC00526Q96FQ7 95 aa6.45□□□□□ -1.38
CCM2-204ENST00000470837 HIST1H4GQ99525 98 aa6.45□□□□□ -1.38
CCM2-204ENST00000470837 HIGD1BQ9P298 99 aa6.45□□□□□ -1.38
CCM2-204ENST00000470837 STARD9Q9P2P6 4700 aa6.44□□□□□ -1.38
CCM2-204ENST00000470837 TRBV30A0A0K0K1B3 111 aa6.44□□□□□ -1.38
CCM2-204ENST00000470837 PFN2P35080 140 aa6.44□□□□□ -1.38
CCM2-204ENST00000470837 COX17Q14061 63 aa6.44□□□□□ -1.38
CCM2-204ENST00000470837 UNQ6190/PRO20217Q6UXQ8 127 aa6.44□□□□□ -1.38
CCM2-204ENST00000470837 CARD19Q96LW7 228 aa6.44□□□□□ -1.38
CCM2-204ENST00000470837 ERG28Q9UKR5 140 aa6.44□□□□□ -1.38
CCM2-204ENST00000470837 PLECQ15149 4684 aaKnown RBP6.43□□□□□ -1.38
CCM2-204ENST00000470837 A0A0U1RRA0 63 aa6.43□□□□□ -1.38
CCM2-204ENST00000470837 Q6ZVH6 145 aa6.43□□□□□ -1.38
CCM2-204ENST00000470837 TP73-AS1Q9UF72 201 aa6.43□□□□□ -1.38
CCM2-204ENST00000470837 PKIGQ9Y2B9 76 aa6.43□□□□□ -1.38
CCM2-204ENST00000470837 M0R143 59 aa6.42□□□□□ -1.38
CCM2-204ENST00000470837 SMIM13P0DJ93 91 aa6.42□□□□□ -1.38
CCM2-204ENST00000470837 CTAG1AP78358 180 aa6.42□□□□□ -1.38
CCM2-204ENST00000470837 HSD52Q0P140 79 aa6.42□□□□□ -1.38
CCM2-204ENST00000470837 TAL2Q16559 108 aa6.42□□□□□ -1.38
CCM2-204ENST00000470837 Q6ZRN7 208 aaPredicted RBP6.42□□□□□ -1.38
CCM2-204ENST00000470837 C2orf91Q6ZV80 131 aa6.42□□□□□ -1.38
CCM2-204ENST00000470837 SPANXB1Q9NS25 103 aaPredicted RBP6.42□□□□□ -1.38
CCM2-204ENST00000470837 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.41□□□□□ -1.38
CCM2-204ENST00000470837 IFITM1P13164 125 aa6.41□□□□□ -1.38
CCM2-204ENST00000470837 PTTG1IPP53801 180 aa6.41□□□□□ -1.38
CCM2-204ENST00000470837 RNF151Q2KHN1 245 aa6.41□□□□□ -1.38
CCM2-204ENST00000470837 Q6ZRU5 148 aa6.41□□□□□ -1.38
CCM2-204ENST00000470837 A0A087WTM6 91 aa6.4□□□□□ -1.38
CCM2-204ENST00000470837 TMEM238LA0A1B0GVL6 79 aa6.4□□□□□ -1.38
CCM2-204ENST00000470837 LRCOL1A6NCL2 159 aa6.4□□□□□ -1.38
CCM2-204ENST00000470837 A6NJY4 79 aa6.4□□□□□ -1.38
CCM2-204ENST00000470837 CNBPP62633 177 aaKnown RBP6.4□□□□□ -1.38
CCM2-204ENST00000470837 RPL24P83731 157 aaKnown RBP6.4□□□□□ -1.38
CCM2-204ENST00000470837 C10orf25Q5T742 122 aa6.4□□□□□ -1.38
CCM2-204ENST00000470837 MIR7-3HGQ8N6C7 128 aa6.4□□□□□ -1.38
CCM2-204ENST00000470837 Q8N814 137 aa6.4□□□□□ -1.38
CCM2-204ENST00000470837 SPANXDQ9BXN6 97 aa6.4□□□□□ -1.38
CCM2-204ENST00000470837 SPANXCQ9NY87 97 aa6.4□□□□□ -1.38
CCM2-204ENST00000470837 C6orf48Q9UBA6 75 aa6.4□□□□□ -1.38
CCM2-204ENST00000470837 RPL18AQ02543 176 aaKnown RBP6.39□□□□□ -1.39
CCM2-204ENST00000470837 WFDC2Q14508 124 aa6.39□□□□□ -1.39
CCM2-204ENST00000470837 BATFQ16520 125 aa6.39□□□□□ -1.39
CCM2-204ENST00000470837 C9orf116Q5BN46 136 aaPredicted RBP6.39□□□□□ -1.39
CCM2-204ENST00000470837 CEND1Q8N111 149 aa6.39□□□□□ -1.39
CCM2-204ENST00000470837 NDUFC2-KCTD14E9PQ53 114 aa6.38□□□□□ -1.39
CCM2-204ENST00000470837 HINT1P49773 126 aaPredicted RBP6.38□□□□□ -1.39
CCM2-204ENST00000470837 NPC2P61916 151 aa6.38□□□□□ -1.39
CCM2-204ENST00000470837 ADAMTSL4-AS1Q5T5F5 129 aa6.38□□□□□ -1.39
CCM2-204ENST00000470837 DAND5Q8N907 189 aa6.38□□□□□ -1.39
CCM2-204ENST00000470837 LOC107984640A0A0U1RRK4 108 aa6.37□□□□□ -1.39
CCM2-204ENST00000470837 A6NDN8 102 aa6.37□□□□□ -1.39
CCM2-204ENST00000470837 GAGE2EQ4V326 116 aa6.37□□□□□ -1.39
CCM2-204ENST00000470837 MUSTN1Q8IVN3 82 aa6.37□□□□□ -1.39
CCM2-204ENST00000470837 LINC00308Q8TCZ7 52 aa6.37□□□□□ -1.39
CCM2-204ENST00000470837 LITAFQ99732 161 aa6.37□□□□□ -1.39
CCM2-204ENST00000470837 GAGE2DQ9UEU5 116 aa6.37□□□□□ -1.39
CCM2-204ENST00000470837 IGLV5-52A0A0A0MRZ9 124 aa6.36□□□□□ -1.39
CCM2-204ENST00000470837 LINC00336Q6ZUF6 198 aa6.36□□□□□ -1.39
CCM2-204ENST00000470837 LYSTQ99698 3801 aa6.36□□□□□ -1.39
CCM2-204ENST00000470837 RTL8CO15255 209 aa6.35□□□□□ -1.39
CCM2-204ENST00000470837 SLPIP03973 132 aa6.35□□□□□ -1.39
CCM2-204ENST00000470837 TLX1NBP0CAT3 122 aa6.35□□□□□ -1.39
CCM2-204ENST00000470837 TNP2Q05952 138 aa6.35□□□□□ -1.39
CCM2-204ENST00000470837 GAGE2BQ13066 116 aa6.35□□□□□ -1.39
CCM2-204ENST00000470837 BVES-AS1Q5T3Y7 98 aa6.35□□□□□ -1.39
CCM2-204ENST00000470837 SND1-IT1Q9HBX3 110 aa6.35□□□□□ -1.39
CCM2-204ENST00000470837 RAB37Q96AX2 223 aa6.34□□□□□ -1.39
CCM2-204ENST00000470837 PPDPFQ9H3Y8 114 aa6.34□□□□□ -1.39
CCM2-204ENST00000470837 XAGE1AQ9HD64 81 aa6.34□□□□□ -1.39
CCM2-204ENST00000470837 LINC00474Q9P2X8 69 aa6.34□□□□□ -1.39
CCM2-204ENST00000470837 VPS13DQ5THJ4 4388 aa6.34□□□□□ -1.39
CCM2-204ENST00000470837 A4D1N5 150 aa6.33□□□□□ -1.4
CCM2-204ENST00000470837 Q6ZRP5 223 aa6.33□□□□□ -1.4
CCM2-204ENST00000470837 C9orf163Q8N9P6 203 aa6.33□□□□□ -1.4
CCM2-204ENST00000470837 DPH3Q96FX2 82 aa6.33□□□□□ -1.4
CCM2-204ENST00000470837 NHP2Q9NX24 153 aaKnown RBP6.33□□□□□ -1.4
CCM2-204ENST00000470837 PGPEP1Q9NXJ5 209 aa6.33□□□□□ -1.4
CCM2-204ENST00000470837 DNAH1Q9P2D7 4330 aa6.32□□□□□ -1.4
CCM2-204ENST00000470837 ALMS1Q8TCU4 4167 aa6.32□□□□□ -1.4
CCM2-204ENST00000470837 FXYD2P54710 66 aa6.32□□□□□ -1.4
CCM2-204ENST00000470837 TRAV13-2A0A0B4J235 113 aa6.31□□□□□ -1.4
CCM2-204ENST00000470837 IGKV2-24A0A0C4DH68 120 aa6.31□□□□□ -1.4
CCM2-204ENST00000470837 LOC107984156A0A0G2JMH3 177 aa6.31□□□□□ -1.4
CCM2-204ENST00000470837 C16orf90A8MZG2 172 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms