RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-210	ENST00000470396	SERF1A	O75920	110 aa		4.28	□□□□□ -1.72
PSMD4-210	ENST00000470396	SPINK8	P0C7L1	97 aa		4.28	□□□□□ -1.72
PSMD4-210	ENST00000470396		Q6ZRP5	223 aa		4.28	□□□□□ -1.72
PSMD4-210	ENST00000470396	KRTAP7-1	Q8IUC3	87 aa		4.28	□□□□□ -1.72
PSMD4-210	ENST00000470396		Q8IZM0	81 aa		4.28	□□□□□ -1.72
PSMD4-210	ENST00000470396	STPG4	Q8N801	248 aa		4.28	□□□□□ -1.72
PSMD4-210	ENST00000470396	GEMIN7	Q9H840	131 aa	Known RBP	4.28	□□□□□ -1.72
PSMD4-210	ENST00000470396	TNXB	P22105	4242 aa		4.28	□□□□□ -1.72
PSMD4-210	ENST00000470396	IGLV5-39	A0A0G2JS06	123 aa		4.27	□□□□□ -1.73
PSMD4-210	ENST00000470396	C11orf86	A6NJI1	115 aa		4.27	□□□□□ -1.73
PSMD4-210	ENST00000470396		F8WDY8	70 aa		4.27	□□□□□ -1.73
PSMD4-210	ENST00000470396	TLX1NB	P0CAT3	122 aa		4.27	□□□□□ -1.73
PSMD4-210	ENST00000470396	INAFM2	P0DMQ5	153 aa		4.27	□□□□□ -1.73
PSMD4-210	ENST00000470396	ZNF22	P17026	224 aa	Predicted RBP	4.27	□□□□□ -1.73
PSMD4-210	ENST00000470396	SEC11A	P67812	179 aa		4.27	□□□□□ -1.73
PSMD4-210	ENST00000470396	RPL18A	Q02543	176 aa	Known RBP	4.27	□□□□□ -1.73
PSMD4-210	ENST00000470396	GAGE2B	Q13066	116 aa		4.27	□□□□□ -1.73
PSMD4-210	ENST00000470396	BAGE3	Q86Y29	109 aa		4.27	□□□□□ -1.73
PSMD4-210	ENST00000470396	TOMM7	Q9P0U1	55 aa		4.27	□□□□□ -1.73
PSMD4-210	ENST00000470396	TRBV30	A0A0K0K1B3	111 aa		4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	FAM168B	A1KXE4	195 aa		4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	HIST1H2BK	O60814	126 aa		4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	ATP5L	O75964	103 aa		4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	PLA2G1B	P04054	148 aa	Known RBP	4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	HIST1H2BJ	P06899	126 aa		4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	HIST1H2BO	P23527	126 aa		4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	HIST1H2BB	P33778	126 aa		4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	NDUFA6	P56556	154 aa		4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	HIST1H2BD	P58876	126 aa		4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	RPL37A	P61513	92 aa	Known RBP	4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	HIST1H2BC	P62807	126 aa		4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	HIST2H2BE	Q16778	126 aa		4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	C9orf129	Q5T035	196 aa	Known RBP	4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	HIST1H2BH	Q93079	126 aa		4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	IFI27L1	Q96BM0	104 aa		4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	HIST1H2BN	Q99877	126 aa		4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	HIST1H2BM	Q99879	126 aa		4.26	□□□□□ -1.73
PSMD4-210	ENST00000470396	TRAV12-1	A0A0B4J245	112 aa		4.25	□□□□□ -1.73
PSMD4-210	ENST00000470396	HSBP1	O75506	76 aa		4.25	□□□□□ -1.73
PSMD4-210	ENST00000470396	C6orf226	Q5I0X4	101 aa		4.25	□□□□□ -1.73
PSMD4-210	ENST00000470396	KRTAP11-1	Q8IUC1	163 aa		4.25	□□□□□ -1.73
PSMD4-210	ENST00000470396	COX7B2	Q8TF08	81 aa		4.25	□□□□□ -1.73
PSMD4-210	ENST00000470396	DPH3	Q96FX2	82 aa		4.25	□□□□□ -1.73
PSMD4-210	ENST00000470396	PACRG	Q96M98	296 aa	Predicted RBP	4.25	□□□□□ -1.73
PSMD4-210	ENST00000470396	LINC00474	Q9P2X8	69 aa		4.25	□□□□□ -1.73
PSMD4-210	ENST00000470396	NDUFC2-KCTD14	E9PQ53	114 aa		4.24	□□□□□ -1.73
PSMD4-210	ENST00000470396		F8VRH5	84 aa		4.24	□□□□□ -1.73
PSMD4-210	ENST00000470396	ATP6V1G1	O75348	118 aa		4.24	□□□□□ -1.73
PSMD4-210	ENST00000470396	PRSS2	P07478	247 aa		4.24	□□□□□ -1.73
PSMD4-210	ENST00000470396	CKS1B	P61024	79 aa		4.24	□□□□□ -1.73
PSMD4-210	ENST00000470396	PRR3	P79522	188 aa	Known RBP	4.24	□□□□□ -1.73
PSMD4-210	ENST00000470396	ODF1	Q14990	250 aa		4.24	□□□□□ -1.73
PSMD4-210	ENST00000470396	GAGE2E	Q4V326	116 aa		4.24	□□□□□ -1.73
PSMD4-210	ENST00000470396	GAGE2D	Q9UEU5	116 aa		4.24	□□□□□ -1.73
PSMD4-210	ENST00000470396	PKIG	Q9Y2B9	76 aa		4.24	□□□□□ -1.73
PSMD4-210	ENST00000470396	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.24	□□□□□ -1.73
PSMD4-210	ENST00000470396	PHF5A	Q7RTV0	110 aa	Known RBP	4.23	□□□□□ -1.73
PSMD4-210	ENST00000470396	TMEM223	A0PJW6	202 aa		4.22	□□□□□ -1.73
PSMD4-210	ENST00000470396		H3BRM9	83 aa		4.22	□□□□□ -1.73
PSMD4-210	ENST00000470396	LEPROTL1	O95214	131 aa		4.22	□□□□□ -1.73
PSMD4-210	ENST00000470396	FABP4	P15090	132 aa		4.22	□□□□□ -1.73
PSMD4-210	ENST00000470396	CXCL5	P42830	114 aa		4.22	□□□□□ -1.73
PSMD4-210	ENST00000470396	TMEM170B	Q5T4T1	132 aa		4.22	□□□□□ -1.73
PSMD4-210	ENST00000470396	SERTAD4-AS1	Q5TG53	156 aa		4.22	□□□□□ -1.73
PSMD4-210	ENST00000470396	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.22	□□□□□ -1.73
PSMD4-210	ENST00000470396	C7orf33	Q8WU49	177 aa		4.22	□□□□□ -1.73
PSMD4-210	ENST00000470396	ZNF625	Q96I27	306 aa	Predicted RBP	4.22	□□□□□ -1.73
PSMD4-210	ENST00000470396	XAGE1A	Q9HD64	81 aa		4.22	□□□□□ -1.73
PSMD4-210	ENST00000470396		H0Y8G0	127 aa		4.21	□□□□□ -1.74
PSMD4-210	ENST00000470396	TSPEAR-AS2	P59090	65 aa		4.21	□□□□□ -1.74
PSMD4-210	ENST00000470396	COA6	Q5JTJ3	125 aa	Known RBP	4.21	□□□□□ -1.74
PSMD4-210	ENST00000470396	PMCHL2	Q9BQD1	86 aa		4.21	□□□□□ -1.74
PSMD4-210	ENST00000470396	PSORS1C2	Q9UIG4	136 aa		4.21	□□□□□ -1.74
PSMD4-210	ENST00000470396	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.2	□□□□□ -1.74
PSMD4-210	ENST00000470396		Q8NDZ9	215 aa		4.2	□□□□□ -1.74
PSMD4-210	ENST00000470396	HSPB8	Q9UJY1	196 aa		4.2	□□□□□ -1.74
PSMD4-210	ENST00000470396		M0QXV9	152 aa		4.19	□□□□□ -1.74
PSMD4-210	ENST00000470396	S100A1	P23297	94 aa		4.19	□□□□□ -1.74
PSMD4-210	ENST00000470396	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
PSMD4-210	ENST00000470396	MT1HL1	P0DM35	61 aa		4.18	□□□□□ -1.74
PSMD4-210	ENST00000470396	PFN2	P35080	140 aa		4.18	□□□□□ -1.74
PSMD4-210	ENST00000470396	ERG28	Q9UKR5	140 aa		4.18	□□□□□ -1.74
PSMD4-210	ENST00000470396	C22orf24	Q9Y442	160 aa		4.18	□□□□□ -1.74
PSMD4-210	ENST00000470396	SYS1-DBNDD2	H3BUS1	97 aa		4.17	□□□□□ -1.74
PSMD4-210	ENST00000470396	DPM2	O94777	84 aa		4.17	□□□□□ -1.74
PSMD4-210	ENST00000470396	C3orf79	P0CE67	100 aa		4.17	□□□□□ -1.74
PSMD4-210	ENST00000470396	PLN	P26678	52 aa		4.17	□□□□□ -1.74
PSMD4-210	ENST00000470396	LINC01545	Q5VT33	79 aa		4.17	□□□□□ -1.74
PSMD4-210	ENST00000470396	SND1-IT1	Q9HBX3	110 aa		4.17	□□□□□ -1.74
PSMD4-210	ENST00000470396	PLA2G2D	Q9UNK4	145 aa		4.17	□□□□□ -1.74
PSMD4-210	ENST00000470396	IGLV5-37	A0A075B6J1	123 aa		4.16	□□□□□ -1.74
PSMD4-210	ENST00000470396	LEPROT	O15243	131 aa		4.16	□□□□□ -1.74
PSMD4-210	ENST00000470396	OXT	P01178	125 aa		4.16	□□□□□ -1.74
PSMD4-210	ENST00000470396	IGKC	P01834	107 aa		4.16	□□□□□ -1.74
PSMD4-210	ENST00000470396	VPREB1	P12018	145 aa		4.16	□□□□□ -1.74
PSMD4-210	ENST00000470396	COX17	Q14061	63 aa		4.16	□□□□□ -1.74
PSMD4-210	ENST00000470396	C1orf137	Q5JT78	98 aa		4.16	□□□□□ -1.74
PSMD4-210	ENST00000470396	MAP1LC3C	Q9BXW4	147 aa		4.16	□□□□□ -1.74
PSMD4-210	ENST00000470396	TP73-AS1	Q9UF72	201 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms