RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 PMVKQ15126 192 aa8.83□□□□□ -1
TOP3B-215ENST00000470338 Q6ZRP5 223 aa8.83□□□□□ -1
TOP3B-215ENST00000470338 Q8IZM0 81 aa8.83□□□□□ -1
TOP3B-215ENST00000470338 IGLV5-45A0A087WSX0 123 aa8.82□□□□□ -1
TOP3B-215ENST00000470338 OXTP01178 125 aa8.82□□□□□ -1
TOP3B-215ENST00000470338 RAB5BP61020 215 aa8.82□□□□□ -1
TOP3B-215ENST00000470338 C9orf116Q5BN46 136 aaPredicted RBP8.82□□□□□ -1
TOP3B-215ENST00000470338 J3QL48 77 aa8.81□□□□□ -1
TOP3B-215ENST00000470338 HBDP02042 147 aa8.81□□□□□ -1
TOP3B-215ENST00000470338 PRSS2P07478 247 aa8.81□□□□□ -1
TOP3B-215ENST00000470338 PRR3P79522 188 aaKnown RBP8.81□□□□□ -1
TOP3B-215ENST00000470338 PDZD11Q5EBL8 140 aa8.81□□□□□ -1
TOP3B-215ENST00000470338 C6orf226Q5I0X4 101 aa8.81□□□□□ -1
TOP3B-215ENST00000470338 LINC00469Q8N7U9 141 aa8.81□□□□□ -1
TOP3B-215ENST00000470338 PACRGQ96M98 296 aaPredicted RBP8.81□□□□□ -1
TOP3B-215ENST00000470338 TOMM7Q9P0U1 55 aa8.81□□□□□ -1
TOP3B-215ENST00000470338 NDUFC2-KCTD14E9PQ53 114 aa8.8□□□□□ -1
TOP3B-215ENST00000470338 CKS1BP61024 79 aa8.8□□□□□ -1
TOP3B-215ENST00000470338 SMIM1B2RUZ4 78 aa8.79□□□□□ -1
TOP3B-215ENST00000470338 PMCHL1Q16048 86 aa8.79□□□□□ -1
TOP3B-215ENST00000470338 COLCA2A8K830 154 aa8.78□□□□□ -1
TOP3B-215ENST00000470338 GAGE2EQ4V326 116 aa8.78□□□□□ -1
TOP3B-215ENST00000470338 GAGE2DQ9UEU5 116 aa8.78□□□□□ -1
TOP3B-215ENST00000470338 ATP5LO75964 103 aa8.77□□□□□ -1.01
TOP3B-215ENST00000470338 IGLC3P0DOY3 106 aa8.77□□□□□ -1.01
TOP3B-215ENST00000470338 CXCL5P42830 114 aa8.77□□□□□ -1.01
TOP3B-215ENST00000470338 CHCHD1Q96BP2 118 aaKnown RBP8.77□□□□□ -1.01
TOP3B-215ENST00000470338 FAM168BA1KXE4 195 aa8.76□□□□□ -1.01
TOP3B-215ENST00000470338 F8VRH5 84 aa8.76□□□□□ -1.01
TOP3B-215ENST00000470338 NDUFA6P56556 154 aa8.76□□□□□ -1.01
TOP3B-215ENST00000470338 PHF5AQ7RTV0 110 aaKnown RBP8.76□□□□□ -1.01
TOP3B-215ENST00000470338 COX7B2Q8TF08 81 aa8.76□□□□□ -1.01
TOP3B-215ENST00000470338 SPINK8P0C7L1 97 aa8.75□□□□□ -1.01
TOP3B-215ENST00000470338 C9orf129Q5T035 196 aaKnown RBP8.75□□□□□ -1.01
TOP3B-215ENST00000470338 KRTAP7-1Q8IUC3 87 aa8.75□□□□□ -1.01
TOP3B-215ENST00000470338 H3BRM9 83 aa8.74□□□□□ -1.01
TOP3B-215ENST00000470338 TRGC2P03986 189 aa8.74□□□□□ -1.01
TOP3B-215ENST00000470338 SRSF9Q13242 221 aaKnown RBP eCLIP8.74□□□□□ -1.01
TOP3B-215ENST00000470338 IGLV5-39A0A0G2JS06 123 aa8.73□□□□□ -1.01
TOP3B-215ENST00000470338 ZNF22P17026 224 aaPredicted RBP8.73□□□□□ -1.01
TOP3B-215ENST00000470338 SPINK6Q6UWN8 80 aa8.73□□□□□ -1.01
TOP3B-215ENST00000470338 BAGE3Q86Y29 109 aa8.73□□□□□ -1.01
TOP3B-215ENST00000470338 PSORS1C2Q9UIG4 136 aa8.73□□□□□ -1.01
TOP3B-215ENST00000470338 FAM19A5Q7Z5A7 132 aaPredicted RBP8.72□□□□□ -1.01
TOP3B-215ENST00000470338 C11orf86A6NJI1 115 aa8.7□□□□□ -1.02
TOP3B-215ENST00000470338 MT1HL1P0DM35 61 aa8.7□□□□□ -1.02
TOP3B-215ENST00000470338 KRTAP11-1Q8IUC1 163 aa8.7□□□□□ -1.02
TOP3B-215ENST00000470338 IFI27L1Q96BM0 104 aa8.7□□□□□ -1.02
TOP3B-215ENST00000470338 TRAV12-1A0A0B4J245 112 aa8.69□□□□□ -1.02
TOP3B-215ENST00000470338 M0QXV9 152 aa8.69□□□□□ -1.02
TOP3B-215ENST00000470338 HSBP1O75506 76 aa8.69□□□□□ -1.02
TOP3B-215ENST00000470338 ODF1Q14990 250 aa8.69□□□□□ -1.02
TOP3B-215ENST00000470338 FAM19A2Q8N3H0 131 aa8.69□□□□□ -1.02
TOP3B-215ENST00000470338 XAGE1AQ9HD64 81 aa8.69□□□□□ -1.02
TOP3B-215ENST00000470338 CHTOPQ9Y3Y2 248 aaKnown RBP8.69□□□□□ -1.02
TOP3B-215ENST00000470338 LINC00310P59036 64 aa8.68□□□□□ -1.02
TOP3B-215ENST00000470338 C1orf137Q5JT78 98 aa8.68□□□□□ -1.02
TOP3B-215ENST00000470338 SERTAD4-AS1Q5TG53 156 aa8.68□□□□□ -1.02
TOP3B-215ENST00000470338 TNXBP22105 4242 aa8.67□□□□□ -1.02
TOP3B-215ENST00000470338 TMEM170BQ5T4T1 132 aa8.67□□□□□ -1.02
TOP3B-215ENST00000470338 LINC01600Q96MT4 127 aa8.67□□□□□ -1.02
TOP3B-215ENST00000470338 SERF1AO75920 110 aa8.66□□□□□ -1.02
TOP3B-215ENST00000470338 C22orf24Q9Y442 160 aa8.66□□□□□ -1.02
TOP3B-215ENST00000470338 IGLV7-43P04211 117 aa8.65□□□□□ -1.02
TOP3B-215ENST00000470338 REG3GQ6UW15 175 aa8.65□□□□□ -1.02
TOP3B-215ENST00000470338 TP73-AS1Q9UF72 201 aa8.65□□□□□ -1.02
TOP3B-215ENST00000470338 PLA2G2DQ9UNK4 145 aa8.65□□□□□ -1.02
TOP3B-215ENST00000470338 NUPR1O60356 82 aa8.64□□□□□ -1.03
TOP3B-215ENST00000470338 UBE2BP63146 152 aa8.64□□□□□ -1.03
TOP3B-215ENST00000470338 TMEM223A0PJW6 202 aa8.63□□□□□ -1.03
TOP3B-215ENST00000470338 LEPROTL1O95214 131 aa8.63□□□□□ -1.03
TOP3B-215ENST00000470338 LBHQ53QV2 105 aaPredicted RBP8.63□□□□□ -1.03
TOP3B-215ENST00000470338 SFTA2Q6UW10 78 aa8.63□□□□□ -1.03
TOP3B-215ENST00000470338 HIST1H2BKO60814 126 aa8.62□□□□□ -1.03
TOP3B-215ENST00000470338 HIST1H2BJP06899 126 aa8.62□□□□□ -1.03
TOP3B-215ENST00000470338 HIST1H2BOP23527 126 aa8.62□□□□□ -1.03
TOP3B-215ENST00000470338 HIST1H2BBP33778 126 aa8.62□□□□□ -1.03
TOP3B-215ENST00000470338 HIST1H2BDP58876 126 aa8.62□□□□□ -1.03
TOP3B-215ENST00000470338 HIST1H2BCP62807 126 aa8.62□□□□□ -1.03
TOP3B-215ENST00000470338 COX17Q14061 63 aa8.62□□□□□ -1.03
TOP3B-215ENST00000470338 HIST2H2BEQ16778 126 aa8.62□□□□□ -1.03
TOP3B-215ENST00000470338 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.62□□□□□ -1.03
TOP3B-215ENST00000470338 HIST1H2BHQ93079 126 aa8.62□□□□□ -1.03
TOP3B-215ENST00000470338 ZNF625Q96I27 306 aaPredicted RBP8.62□□□□□ -1.03
TOP3B-215ENST00000470338 HIST1H2BNQ99877 126 aa8.62□□□□□ -1.03
TOP3B-215ENST00000470338 HIST1H2BMQ99879 126 aa8.62□□□□□ -1.03
TOP3B-215ENST00000470338 IGLV5-37A0A075B6J1 123 aa8.61□□□□□ -1.03
TOP3B-215ENST00000470338 PFN2P35080 140 aa8.61□□□□□ -1.03
TOP3B-215ENST00000470338 KRTAP10-8P60410 259 aa8.61□□□□□ -1.03
TOP3B-215ENST00000470338 MRPL55Q7Z7F7 128 aaKnown RBP8.61□□□□□ -1.03
TOP3B-215ENST00000470338 ERG28Q9UKR5 140 aa8.61□□□□□ -1.03
TOP3B-215ENST00000470338 DIRC1Q969H9 104 aa8.59□□□□□ -1.03
TOP3B-215ENST00000470338 LINC00167Q96N53 147 aa8.59□□□□□ -1.03
TOP3B-215ENST00000470338 SND1-IT1Q9HBX3 110 aa8.59□□□□□ -1.03
TOP3B-215ENST00000470338 HSPB8Q9UJY1 196 aa8.59□□□□□ -1.03
TOP3B-215ENST00000470338 H0Y8G0 127 aa8.58□□□□□ -1.04
TOP3B-215ENST00000470338 FABP4P15090 132 aa8.58□□□□□ -1.04
TOP3B-215ENST00000470338 HMCN2Q8NDA2 5059 aa8.58□□□□□ -1.04
TOP3B-215ENST00000470338 H0Y9J4 135 aa8.57□□□□□ -1.04
TOP3B-215ENST00000470338 S100A6P06703 90 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 190.7 ms