RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CCDC179H3BU77 68 aa9.43□□□□□ -0.9
BRCA1-209ENST00000470026 PFN2P35080 140 aa9.43□□□□□ -0.9
BRCA1-209ENST00000470026 C6orf226Q5I0X4 101 aa9.43□□□□□ -0.9
BRCA1-209ENST00000470026 B5MCH6 92 aa9.41□□□□□ -0.9
BRCA1-209ENST00000470026 XCL1P47992 114 aa9.41□□□□□ -0.9
BRCA1-209ENST00000470026 LYRM9A8MSI8 78 aa9.41□□□□□ -0.9
BRCA1-209ENST00000470026 PAX4O43316 350 aa9.41□□□□□ -0.9
BRCA1-209ENST00000470026 DNAL4O96015 105 aa9.41□□□□□ -0.9
BRCA1-209ENST00000470026 KIAA0087Q14695 138 aa9.4□□□□□ -0.9
BRCA1-209ENST00000470026 NIPBLQ6KC79 2804 aaeCLIP9.4□□□□□ -0.9
BRCA1-209ENST00000470026 CXCL5P42830 114 aa9.39□□□□□ -0.91
BRCA1-209ENST00000470026 C9orf129Q5T035 196 aaKnown RBP9.38□□□□□ -0.91
BRCA1-209ENST00000470026 CD164L2Q6UWJ8 174 aa9.38□□□□□ -0.91
BRCA1-209ENST00000470026 LINC00167Q96N53 147 aa9.38□□□□□ -0.91
BRCA1-209ENST00000470026 ACANP16112 2415 aa9.38□□□□□ -0.91
BRCA1-209ENST00000470026 LECT2O14960 151 aa9.38□□□□□ -0.91
BRCA1-209ENST00000470026 NDUFC2O95298 119 aa9.38□□□□□ -0.91
BRCA1-209ENST00000470026 COX17Q14061 63 aa9.38□□□□□ -0.91
BRCA1-209ENST00000470026 SETD2Q9BYW2 2564 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-209ENST00000470026 IGHV4-28A0A0C4DH34 117 aa9.37□□□□□ -0.91
BRCA1-209ENST00000470026 ATP5G1P05496 136 aa9.37□□□□□ -0.91
BRCA1-209ENST00000470026 NANOS2P60321 138 aaKnown RBP9.37□□□□□ -0.91
BRCA1-209ENST00000470026 SS18L2Q9UHA2 77 aa9.37□□□□□ -0.91
BRCA1-209ENST00000470026 A0A1B0GX51 115 aa9.37□□□□□ -0.91
BRCA1-209ENST00000470026 GAGE2AQ6NT46 116 aa9.37□□□□□ -0.91
BRCA1-209ENST00000470026 C11orf68Q9H3H3 251 aaKnown RBP9.37□□□□□ -0.91
BRCA1-209ENST00000470026 KLK5Q9Y337 293 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-209ENST00000470026 FAM236AA0A1B0GUQ0 79 aa9.36□□□□□ -0.91
BRCA1-209ENST00000470026 FAM236BA0A1B0GV22 79 aa9.36□□□□□ -0.91
BRCA1-209ENST00000470026 OR13C6PQ8NH95 151 aa9.36□□□□□ -0.91
BRCA1-209ENST00000470026 CLPSL2Q6UWE3 100 aa9.35□□□□□ -0.91
BRCA1-209ENST00000470026 MTORP42345 2549 aa9.35□□□□□ -0.91
BRCA1-209ENST00000470026 A0A096LPF7 62 aa9.35□□□□□ -0.91
BRCA1-209ENST00000470026 C9orf66Q5T8R8 295 aa9.35□□□□□ -0.91
BRCA1-209ENST00000470026 LINC00269Q8N2A0 174 aa9.35□□□□□ -0.91
BRCA1-209ENST00000470026 SPATA3Q8NHX4 192 aa9.34□□□□□ -0.91
BRCA1-209ENST00000470026 CHCHD10Q8WYQ3 142 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-209ENST00000470026 C14orf132Q9NPU4 83 aa9.34□□□□□ -0.91
BRCA1-209ENST00000470026 TENM4Q6N022 2769 aa9.33□□□□□ -0.92
BRCA1-209ENST00000470026 SMR3AQ99954 134 aa9.33□□□□□ -0.92
BRCA1-209ENST00000470026 ORMDL1Q9P0S3 153 aa9.33□□□□□ -0.92
BRCA1-209ENST00000470026 HIST1H4AP62805 103 aaKnown RBP9.32□□□□□ -0.92
BRCA1-209ENST00000470026 REG3AQ06141 175 aa9.32□□□□□ -0.92
BRCA1-209ENST00000470026 FN1P02751 2386 aaKnown RBP9.31□□□□□ -0.92
BRCA1-209ENST00000470026 CFAP161Q6P656 301 aa9.31□□□□□ -0.92
BRCA1-209ENST00000470026 TMEM126AQ9H061 195 aa9.31□□□□□ -0.92
BRCA1-209ENST00000470026 J3QKU1 62 aa9.31□□□□□ -0.92
BRCA1-209ENST00000470026 SLPIP03973 132 aa9.31□□□□□ -0.92
BRCA1-209ENST00000470026 APOC4P55056 127 aa9.31□□□□□ -0.92
BRCA1-209ENST00000470026 DEFB135Q30KP9 77 aa9.31□□□□□ -0.92
BRCA1-209ENST00000470026 Q8N3U1 123 aa9.31□□□□□ -0.92
BRCA1-209ENST00000470026 NCR3O14931 201 aa9.3□□□□□ -0.92
BRCA1-209ENST00000470026 ANGP03950 147 aaKnown RBP9.3□□□□□ -0.92
BRCA1-209ENST00000470026 PRR3P79522 188 aaKnown RBP9.3□□□□□ -0.92
BRCA1-209ENST00000470026 Q6JHZ5 121 aa9.3□□□□□ -0.92
BRCA1-209ENST00000470026 Q8N814 137 aa9.3□□□□□ -0.92
BRCA1-209ENST00000470026 Q8NAQ8 132 aa9.3□□□□□ -0.92
BRCA1-209ENST00000470026 MUC7Q8TAX7 377 aa9.3□□□□□ -0.92
BRCA1-209ENST00000470026 LINC00846Q9NV44 126 aa9.29□□□□□ -0.92
BRCA1-209ENST00000470026 DAD1P61803 113 aa9.29□□□□□ -0.92
BRCA1-209ENST00000470026 DEFB4AO15263 64 aa9.28□□□□□ -0.92
BRCA1-209ENST00000470026 MIFP14174 115 aa9.28□□□□□ -0.92
BRCA1-209ENST00000470026 Q8NDZ9 215 aa9.28□□□□□ -0.92
BRCA1-209ENST00000470026 CELA1Q9UNI1 258 aa9.28□□□□□ -0.92
BRCA1-209ENST00000470026 IGLV10-54A0A075B6I4 117 aa9.27□□□□□ -0.93
BRCA1-209ENST00000470026 JMJD7-PLA2G4BH0Y9G9 81 aa9.27□□□□□ -0.93
BRCA1-209ENST00000470026 CCKP06307 115 aa9.27□□□□□ -0.93
BRCA1-209ENST00000470026 LELP1Q5T871 98 aa9.27□□□□□ -0.93
BRCA1-209ENST00000470026 PRR34Q9NV39 138 aa9.27□□□□□ -0.93
BRCA1-209ENST00000470026 HIVEP2P31629 2446 aa9.27□□□□□ -0.93
BRCA1-209ENST00000470026 A0A0J9YWU9 116 aa9.26□□□□□ -0.93
BRCA1-209ENST00000470026 IGHV4-30-4P0DP06 118 aa9.26□□□□□ -0.93
BRCA1-209ENST00000470026 C9orf116Q5BN46 136 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-209ENST00000470026 C3orf22Q8N5N4 141 aa9.26□□□□□ -0.93
BRCA1-209ENST00000470026 ITPR2Q14571 2701 aa9.26□□□□□ -0.93
BRCA1-209ENST00000470026 TMEM256-PLSCR3K7ERE1 68 aa9.26□□□□□ -0.93
BRCA1-209ENST00000470026 UQCRQO14949 82 aa9.26□□□□□ -0.93
BRCA1-209ENST00000470026 C10orf25Q5T742 122 aa9.24□□□□□ -0.93
BRCA1-209ENST00000470026 LINC00526Q96FQ7 95 aa9.24□□□□□ -0.93
BRCA1-209ENST00000470026 C2orf48Q96LS8 159 aa9.24□□□□□ -0.93
BRCA1-209ENST00000470026 GVQW2A0A096LPI5 108 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-209ENST00000470026 SPART-AS1P0CW21 52 aa9.23□□□□□ -0.93
BRCA1-209ENST00000470026 SPAG11BQ08648 103 aa9.23□□□□□ -0.93
BRCA1-209ENST00000470026 C6orf99Q4VX62 202 aa9.23□□□□□ -0.93
BRCA1-209ENST00000470026 ATOX1O00244 68 aa9.23□□□□□ -0.93
BRCA1-209ENST00000470026 UNQ6190/PRO20217Q6UXQ8 127 aa9.23□□□□□ -0.93
BRCA1-209ENST00000470026 LINC00575Q6W349 94 aa9.23□□□□□ -0.93
BRCA1-209ENST00000470026 UNC79Q9P2D8 2635 aa9.22□□□□□ -0.93
BRCA1-209ENST00000470026 WIPF1O43516 503 aa9.22□□□□□ -0.93
BRCA1-209ENST00000470026 GCN1Q92616 2671 aaKnown RBP9.22□□□□□ -0.93
BRCA1-209ENST00000470026 COX7CP15954 63 aa9.22□□□□□ -0.93
BRCA1-209ENST00000470026 C6orf223Q8N319 242 aa9.22□□□□□ -0.93
BRCA1-209ENST00000470026 CYSRT1A8MQ03 144 aa9.21□□□□□ -0.94
BRCA1-209ENST00000470026 IGLV6-57P01721 117 aa9.21□□□□□ -0.94
BRCA1-209ENST00000470026 RPL18AQ02543 176 aaKnown RBP9.21□□□□□ -0.94
BRCA1-209ENST00000470026 IGKV3D-7A0A0C4DH55 119 aa9.2□□□□□ -0.94
BRCA1-209ENST00000470026 LYPD5Q6UWN5 251 aa9.2□□□□□ -0.94
BRCA1-209ENST00000470026 ENHOQ6UWT2 76 aa9.2□□□□□ -0.94
BRCA1-209ENST00000470026 WFDC9Q8NEX5 89 aa9.2□□□□□ -0.94
BRCA1-209ENST00000470026 S100A7L2Q5SY68 101 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms