RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 NDUFA6P56556 154 aa4.05□□□□□ -1.76
PTCD3-208ENST00000469585 RPL39P62891 51 aaKnown RBP4.05□□□□□ -1.76
PTCD3-208ENST00000469585 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
PTCD3-208ENST00000469585 BAGE3Q86Y29 109 aa4.05□□□□□ -1.76
PTCD3-208ENST00000469585 STARD9Q9P2P6 4700 aa4.04□□□□□ -1.76
PTCD3-208ENST00000469585 ALMS1Q8TCU4 4167 aa4.04□□□□□ -1.76
PTCD3-208ENST00000469585 F8WDY8 70 aa4.04□□□□□ -1.76
PTCD3-208ENST00000469585 H3BRM9 83 aa4.04□□□□□ -1.76
PTCD3-208ENST00000469585 ATP5LO75964 103 aa4.04□□□□□ -1.76
PTCD3-208ENST00000469585 LINC00614P0C842 121 aa4.04□□□□□ -1.76
PTCD3-208ENST00000469585 HERVK_113P63121 156 aa4.04□□□□□ -1.76
PTCD3-208ENST00000469585 RNASE13Q5GAN3 156 aaKnown RBP4.04□□□□□ -1.76
PTCD3-208ENST00000469585 Q6ZUT4 128 aa4.04□□□□□ -1.76
PTCD3-208ENST00000469585 ERASQ7Z444 233 aa4.04□□□□□ -1.76
PTCD3-208ENST00000469585 SLC7A5P1Q8MH63 180 aa4.04□□□□□ -1.76
PTCD3-208ENST00000469585 OR10D4PQ8NGN7 298 aa4.04□□□□□ -1.76
PTCD3-208ENST00000469585 TOMM6Q96B49 74 aa4.04□□□□□ -1.76
PTCD3-208ENST00000469585 CARD19Q96LW7 228 aa4.04□□□□□ -1.76
PTCD3-208ENST00000469585 CAMK2N2Q96S95 79 aa4.04□□□□□ -1.76
PTCD3-208ENST00000469585 TIMM17AQ99595 171 aa4.04□□□□□ -1.76
PTCD3-208ENST00000469585 HSBP1O75506 76 aa4.03□□□□□ -1.76
PTCD3-208ENST00000469585 HBDP02042 147 aa4.03□□□□□ -1.76
PTCD3-208ENST00000469585 CKS1BP61024 79 aa4.03□□□□□ -1.76
PTCD3-208ENST00000469585 CNBPP62633 177 aaKnown RBP4.03□□□□□ -1.76
PTCD3-208ENST00000469585 Q1RN00 199 aa4.03□□□□□ -1.76
PTCD3-208ENST00000469585 LYSTQ99698 3801 aa4.02□□□□□ -1.77
PTCD3-208ENST00000469585 IGLV4-69A0A075B6H9 119 aa4.02□□□□□ -1.77
PTCD3-208ENST00000469585 GVQW2A0A096LPI5 108 aaPredicted RBP4.02□□□□□ -1.77
PTCD3-208ENST00000469585 NDUFA1O15239 70 aa4.02□□□□□ -1.77
PTCD3-208ENST00000469585 SPAG11BQ08648 103 aa4.02□□□□□ -1.77
PTCD3-208ENST00000469585 SYCNQ0VAF6 134 aa4.02□□□□□ -1.77
PTCD3-208ENST00000469585 C6orf226Q5I0X4 101 aa4.02□□□□□ -1.77
PTCD3-208ENST00000469585 C5orf38Q86SI9 138 aa4.02□□□□□ -1.77
PTCD3-208ENST00000469585 CBLN2Q8IUK8 224 aa4.02□□□□□ -1.77
PTCD3-208ENST00000469585 LINC00469Q8N7U9 141 aa4.02□□□□□ -1.77
PTCD3-208ENST00000469585 C7orf33Q8WU49 177 aa4.02□□□□□ -1.77
PTCD3-208ENST00000469585 ORAOV1Q8WV07 137 aa4.02□□□□□ -1.77
PTCD3-208ENST00000469585 CHCHD1Q96BP2 118 aaKnown RBP4.02□□□□□ -1.77
PTCD3-208ENST00000469585 LOC107984640A0A0U1RRK4 108 aa4.01□□□□□ -1.77
PTCD3-208ENST00000469585 S100A1P23297 94 aa4.01□□□□□ -1.77
PTCD3-208ENST00000469585 CXCL5P42830 114 aa4.01□□□□□ -1.77
PTCD3-208ENST00000469585 PMVKQ15126 192 aa4.01□□□□□ -1.77
PTCD3-208ENST00000469585 C18orf32Q8TCD1 76 aa4.01□□□□□ -1.77
PTCD3-208ENST00000469585 TOMM7Q9P0U1 55 aa4.01□□□□□ -1.77
PTCD3-208ENST00000469585 HSPB8Q9UJY1 196 aa4.01□□□□□ -1.77
PTCD3-208ENST00000469585 RPL18AQ02543 176 aaKnown RBP4□□□□□ -1.77
PTCD3-208ENST00000469585 SFTA2Q6UW10 78 aa4□□□□□ -1.77
PTCD3-208ENST00000469585 LINC01561Q8N1V8 128 aa4□□□□□ -1.77
PTCD3-208ENST00000469585 C9orf163Q8N9P6 203 aa4□□□□□ -1.77
PTCD3-208ENST00000469585 TINCRA0A1B0GVN0 87 aa3.99□□□□□ -1.77
PTCD3-208ENST00000469585 IGIPA6NJ69 53 aa3.99□□□□□ -1.77
PTCD3-208ENST00000469585 TRGC2P03986 189 aa3.99□□□□□ -1.77
PTCD3-208ENST00000469585 FUSP35637 526 aaKnown RBP eCLIP3.99□□□□□ -1.77
PTCD3-208ENST00000469585 UBE2D1P51668 147 aa3.99□□□□□ -1.77
PTCD3-208ENST00000469585 KRTAP10-1P60331 282 aa3.99□□□□□ -1.77
PTCD3-208ENST00000469585 WFDC2Q14508 124 aa3.99□□□□□ -1.77
PTCD3-208ENST00000469585 MAJINQ3KP22 176 aa3.99□□□□□ -1.77
PTCD3-208ENST00000469585 AMELXQ99217 191 aa3.99□□□□□ -1.77
PTCD3-208ENST00000469585 CHAC1Q9BUX1 264 aa3.99□□□□□ -1.77
PTCD3-208ENST00000469585 KMT2CQ8NEZ4 4911 aaKnown RBP3.99□□□□□ -1.77
PTCD3-208ENST00000469585 IGHV3OR16-9A0A0B4J2B5 98 aa3.98□□□□□ -1.77
PTCD3-208ENST00000469585 IGKV2-24A0A0C4DH68 120 aa3.98□□□□□ -1.77
PTCD3-208ENST00000469585 TRBV30A0A0K0K1B3 111 aa3.98□□□□□ -1.77
PTCD3-208ENST00000469585 LINC01546A6NGU7 62 aa3.98□□□□□ -1.77
PTCD3-208ENST00000469585 LEPROTL1O95214 131 aa3.98□□□□□ -1.77
PTCD3-208ENST00000469585 HERVK_113P61574 105 aa3.98□□□□□ -1.77
PTCD3-208ENST00000469585 COX6A2Q02221 97 aa3.98□□□□□ -1.77
PTCD3-208ENST00000469585 TMEM170BQ5T4T1 132 aa3.98□□□□□ -1.77
PTCD3-208ENST00000469585 KRTAP26-1Q6PEX3 210 aa3.98□□□□□ -1.77
PTCD3-208ENST00000469585 C15orf56Q8N910 161 aa3.98□□□□□ -1.77
PTCD3-208ENST00000469585 IFI27L1Q96BM0 104 aa3.98□□□□□ -1.77
PTCD3-208ENST00000469585 CST9LQ9H4G1 147 aa3.98□□□□□ -1.77
PTCD3-208ENST00000469585 H0Y8G0 127 aa3.97□□□□□ -1.77
PTCD3-208ENST00000469585 AKR1D1P51857 326 aa3.97□□□□□ -1.77
PTCD3-208ENST00000469585 LINC01620Q4KN68 170 aa3.97□□□□□ -1.77
PTCD3-208ENST00000469585 PDZD11Q5EBL8 140 aa3.97□□□□□ -1.77
PTCD3-208ENST00000469585 Q8IZM0 81 aa3.97□□□□□ -1.77
PTCD3-208ENST00000469585 MAP1LC3CQ9BXW4 147 aa3.97□□□□□ -1.77
PTCD3-208ENST00000469585 MRPL35Q9NZE8 188 aaKnown RBP3.97□□□□□ -1.77
PTCD3-208ENST00000469585 CHTOPQ9Y3Y2 248 aaKnown RBP3.97□□□□□ -1.77
PTCD3-208ENST00000469585 A0A0J9YXV3 536 aa3.96□□□□□ -1.78
PTCD3-208ENST00000469585 C20orf202A1L168 122 aa3.96□□□□□ -1.78
PTCD3-208ENST00000469585 LINC00587B1AMM8 73 aa3.96□□□□□ -1.78
PTCD3-208ENST00000469585 F8VRH5 84 aa3.96□□□□□ -1.78
PTCD3-208ENST00000469585 PLNP26678 52 aa3.96□□□□□ -1.78
PTCD3-208ENST00000469585 PMCHL1Q16048 86 aa3.96□□□□□ -1.78
PTCD3-208ENST00000469585 Q5VSD8 79 aa3.96□□□□□ -1.78
PTCD3-208ENST00000469585 COX7B2Q8TF08 81 aa3.96□□□□□ -1.78
PTCD3-208ENST00000469585 KMT2AQ03164 3969 aa3.96□□□□□ -1.78
PTCD3-208ENST00000469585 TRAV12-1A0A0B4J245 112 aa3.95□□□□□ -1.78
PTCD3-208ENST00000469585 SERF1AO75920 110 aa3.95□□□□□ -1.78
PTCD3-208ENST00000469585 SMR3BP02814 79 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-208ENST00000469585 S100A6P06703 90 aa3.95□□□□□ -1.78
PTCD3-208ENST00000469585 RPL37AP61513 92 aaKnown RBP3.95□□□□□ -1.78
PTCD3-208ENST00000469585 SDIM1Q6ZPB5 146 aa3.95□□□□□ -1.78
PTCD3-208ENST00000469585 Q6ZRU5 148 aa3.95□□□□□ -1.78
PTCD3-208ENST00000469585 Q6ZSA8 131 aa3.95□□□□□ -1.78
PTCD3-208ENST00000469585 SCXQ7RTU7 201 aa3.95□□□□□ -1.78
PTCD3-208ENST00000469585 FAM19A3Q7Z5A8 133 aa3.95□□□□□ -1.78
PTCD3-208ENST00000469585 LINC00526Q96FQ7 95 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms